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The map label for this gene is aam1 [H]

Identifier: 77458759

GI number: 77458759

Start: 2895959

End: 2897953

Strand: Direct

Name: aam1 [H]

Synonym: Pfl01_2534

Alternate gene names: 77458759

Gene position: 2895959-2897953 (Clockwise)

Preceding gene: 77458757

Following gene: 77458760

Centisome position: 44.98

GC content: 61.0

Gene sequence:

>1995_bases
ATGACTGCTGAAAAACCCTCGGAACAGAGCTACAACCCGCATATACCGCTGTCGCAGGCCCTGCTGCTGCCGCGCATCGT
CATAGAAAACACTGCGCCGACCCTCGACGGCGGACAGTTTGCCGTCAAGGCAATCGCAGGCCGGGAGATCGTGGTCACCA
GCAAGGTGTTCGCTGACGGTCACGACAAACTGGCGGTGCGCATCCGCTGGCGCGAAGAGGGCGATGAGACCTGGCAGACC
GAAGTCATGTCCGATCAGGGCAATAACGGCTGGAAAGGCGTTTTCCAGCCACAGCGCGTGGGCCGATATCTGTTTCTGAT
CGAAGCCTGGATCGACCAGTTCGCCAGTTTTCAGTACGAACTGGAGAAAAAGCACACCGCCGCCGTCCCGGTCAGCCTCG
AGCTGCAAGAAGGACGCAACATGGTGCAGCAAGCTGCCGAGCGCAGCGAAGGTCAGCTGAGCGAACAACTGGCAGCCTTG
CACCACGAATTGTCCGGCCTGCTCGAAACCGAGCAGGTCGCGTTGTTCCTGCACTCGCGCAGTGCGCAACTGATGGCCGA
GGCCGATCACCGCGCCTACCTGAGCATCAGTGCGGAATTCCCGGTGGATGTCGAGCGCGAACTGGCGGAATTCGCCAGTT
GGTATGAATTGTTTCCCCGCTCGATCACCGACGATCCCGCCCGCCACGGCACCTTCAATGACGTGCACGCGCGCCTGCCG
ATGATTCAGGACATGGGCTTCGACGTGTTGTACTTCACGCCGATCCACCCGATTGGTCGCAGCCATCGCAAGGGTCGCAA
CAATTCCCTGACCGCCGGCCCGGACGATCCCGGCAGCCCGTATGCGATCGGCAGCGAGGAGGGTGGGCACGAAGCGATTC
ACTCGCAACTCGGCACCCGTGAGGACTTCCGCCGGCTGGTGGCCGCAGCCGCTGACCATGGGCTGGAAATCGCCCTCGAC
TTCGCCATCCAGTGTTCCCAGGATCACCCGTGGCTCAAGCAGCATCCGGGCTGGTTCAACTGGCGGCCGGACGGCACGAT
CAAATACGCGGAGAACCCGCCGAAGAAATACCAGGACATCGTCAACGTCGACTTCTACGCGCCGGAAGCGATTCCGAGCC
TGTGGGTCGAGTTGCGCGACATCGTGGTCGGCTGGGTGCAGGAGGGCGTGAAGATCTTTCGCGTCGACAACCCGCACACC
AAGCCGCTGCCGTTCTGGCAATGGTTGATCGCCGATGTCCGTACGTTGTACCCGGAAGTGATCTTCCTCGCTGAAGCTTT
CACTACGCCGGCGATGATGGCGCGGCTGGGCAAGGTCGGTTACACCCAGAGCTACACCTATTTCACCTGGCGCAACACCA
AGGCCGAACTGGCGACCTACTTCAGCGAACTCAATGAATCACCGTGGCGCGAATGCTACCGGCCGAATTTCTTCGTCAAC
ACCCCGGACATCAACCCGGCGTTCCTGCATGAATCGGGACGTCCCGGATTTCTCATCCGCGCCGCGCTGGCGACCATGGG
CTCGGGCCTGTGGGGCATGTATTCGGGATTCGAGCTGTGTGAATCGGCGCCGGTGCCGGGCAAGGAGGAATATCTTGATT
CGGAGAAGTACGAGATCCGCGTCCGCGACTTCAACCAGCCCGGCAACATCATTGCCGAGATCGCCCAGCTCAACCGCATT
CGCCGCCAGAACCCGGCGCTGCACAGTCATCTTGGCCTGAAGATCTACAACGCCTGGAACGACAACATTCTGTATTTCGG
CAAGCGCAGCGCAGACGGCAGCAACTTCATTCTGGTGGCCGTCAGCCTCGATCCGCATAACGTTCAGGAAGCGAATTTCG
AGCTGCCGCTGTGGGAAATGGGCCTGCCGGACGATGCCACGACCCACGGCGAAGACCTGATGAACGGCCATCGCTGGGAC
TGGCACGGCAAGTACCAGTTCATGCGGATCGACCCGGCTTACCAGCCGTTCGGAATCTGGCGGATCACCGCCTGA

Upstream 100 bases:

>100_bases
GTCGCTCGGAACCTGAGAGAGTTCATCATCGGGCGCAGGCCCGGCCGTGACCGCCAAACAGGCAAACGAGCGTCCTTGGG
GCGTTAAGGAGAGATGCTCA

Downstream 100 bases:

>100_bases
ACACAGATCCCACAGGTTGCTCATCGTTTGCGAGCCAAGTGATCGGCTCACCGTGTCTATAGAATTCAACAGGAGTTTCA
CATGGCGAAGAAACCCAAGG

Product: alpha amylase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 664; Mature: 663

Protein sequence:

>664_residues
MTAEKPSEQSYNPHIPLSQALLLPRIVIENTAPTLDGGQFAVKAIAGREIVVTSKVFADGHDKLAVRIRWREEGDETWQT
EVMSDQGNNGWKGVFQPQRVGRYLFLIEAWIDQFASFQYELEKKHTAAVPVSLELQEGRNMVQQAAERSEGQLSEQLAAL
HHELSGLLETEQVALFLHSRSAQLMAEADHRAYLSISAEFPVDVERELAEFASWYELFPRSITDDPARHGTFNDVHARLP
MIQDMGFDVLYFTPIHPIGRSHRKGRNNSLTAGPDDPGSPYAIGSEEGGHEAIHSQLGTREDFRRLVAAAADHGLEIALD
FAIQCSQDHPWLKQHPGWFNWRPDGTIKYAENPPKKYQDIVNVDFYAPEAIPSLWVELRDIVVGWVQEGVKIFRVDNPHT
KPLPFWQWLIADVRTLYPEVIFLAEAFTTPAMMARLGKVGYTQSYTYFTWRNTKAELATYFSELNESPWRECYRPNFFVN
TPDINPAFLHESGRPGFLIRAALATMGSGLWGMYSGFELCESAPVPGKEEYLDSEKYEIRVRDFNQPGNIIAEIAQLNRI
RRQNPALHSHLGLKIYNAWNDNILYFGKRSADGSNFILVAVSLDPHNVQEANFELPLWEMGLPDDATTHGEDLMNGHRWD
WHGKYQFMRIDPAYQPFGIWRITA

Sequences:

>Translated_664_residues
MTAEKPSEQSYNPHIPLSQALLLPRIVIENTAPTLDGGQFAVKAIAGREIVVTSKVFADGHDKLAVRIRWREEGDETWQT
EVMSDQGNNGWKGVFQPQRVGRYLFLIEAWIDQFASFQYELEKKHTAAVPVSLELQEGRNMVQQAAERSEGQLSEQLAAL
HHELSGLLETEQVALFLHSRSAQLMAEADHRAYLSISAEFPVDVERELAEFASWYELFPRSITDDPARHGTFNDVHARLP
MIQDMGFDVLYFTPIHPIGRSHRKGRNNSLTAGPDDPGSPYAIGSEEGGHEAIHSQLGTREDFRRLVAAAADHGLEIALD
FAIQCSQDHPWLKQHPGWFNWRPDGTIKYAENPPKKYQDIVNVDFYAPEAIPSLWVELRDIVVGWVQEGVKIFRVDNPHT
KPLPFWQWLIADVRTLYPEVIFLAEAFTTPAMMARLGKVGYTQSYTYFTWRNTKAELATYFSELNESPWRECYRPNFFVN
TPDINPAFLHESGRPGFLIRAALATMGSGLWGMYSGFELCESAPVPGKEEYLDSEKYEIRVRDFNQPGNIIAEIAQLNRI
RRQNPALHSHLGLKIYNAWNDNILYFGKRSADGSNFILVAVSLDPHNVQEANFELPLWEMGLPDDATTHGEDLMNGHRWD
WHGKYQFMRIDPAYQPFGIWRITA
>Mature_663_residues
TAEKPSEQSYNPHIPLSQALLLPRIVIENTAPTLDGGQFAVKAIAGREIVVTSKVFADGHDKLAVRIRWREEGDETWQTE
VMSDQGNNGWKGVFQPQRVGRYLFLIEAWIDQFASFQYELEKKHTAAVPVSLELQEGRNMVQQAAERSEGQLSEQLAALH
HELSGLLETEQVALFLHSRSAQLMAEADHRAYLSISAEFPVDVERELAEFASWYELFPRSITDDPARHGTFNDVHARLPM
IQDMGFDVLYFTPIHPIGRSHRKGRNNSLTAGPDDPGSPYAIGSEEGGHEAIHSQLGTREDFRRLVAAAADHGLEIALDF
AIQCSQDHPWLKQHPGWFNWRPDGTIKYAENPPKKYQDIVNVDFYAPEAIPSLWVELRDIVVGWVQEGVKIFRVDNPHTK
PLPFWQWLIADVRTLYPEVIFLAEAFTTPAMMARLGKVGYTQSYTYFTWRNTKAELATYFSELNESPWRECYRPNFFVNT
PDINPAFLHESGRPGFLIRAALATMGSGLWGMYSGFELCESAPVPGKEEYLDSEKYEIRVRDFNQPGNIIAEIAQLNRIR
RQNPALHSHLGLKIYNAWNDNILYFGKRSADGSNFILVAVSLDPHNVQEANFELPLWEMGLPDDATTHGEDLMNGHRWDW
HGKYQFMRIDPAYQPFGIWRITA

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family. GlgE subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021828
- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF11896 DUF3416 [H]

EC number: NA

Molecular weight: Translated: 75666; Mature: 75535

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00019 ACTININ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEKPSEQSYNPHIPLSQALLLPRIVIENTAPTLDGGQFAVKAIAGREIVVTSKVFADG
CCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCEEEEEEHHHCCC
HDKLAVRIRWREEGDETWQTEVMSDQGNNGWKGVFQPQRVGRYLFLIEAWIDQFASFQYE
CCEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHH
LEKKHTAAVPVSLELQEGRNMVQQAAERSEGQLSEQLAALHHELSGLLETEQVALFLHSR
HCCCCCEECEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECC
SAQLMAEADHRAYLSISAEFPVDVERELAEFASWYELFPRSITDDPARHGTFNDVHARLP
CHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHCC
MIQDMGFDVLYFTPIHPIGRSHRKGRNNSLTAGPDDPGSPYAIGSEEGGHEAIHSQLGTR
HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCH
EDFRRLVAAAADHGLEIALDFAIQCSQDHPWLKQHPGWFNWRPDGTIKYAENPPKKYQDI
HHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCEEEECCCCCHHHHHH
VNVDFYAPEAIPSLWVELRDIVVGWVQEGVKIFRVDNPHTKPLPFWQWLIADVRTLYPEV
HCCEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
IFLAEAFTTPAMMARLGKVGYTQSYTYFTWRNTKAELATYFSELNESPWRECYRPNFFVN
HHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCEEEE
TPDINPAFLHESGRPGFLIRAALATMGSGLWGMYSGFELCESAPVPGKEEYLDSEKYEIR
CCCCCHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEE
VRDFNQPGNIIAEIAQLNRIRRQNPALHSHLGLKIYNAWNDNILYFGKRSADGSNFILVA
EEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCEEEEECCCCCCCCEEEEE
VSLDPHNVQEANFELPLWEMGLPDDATTHGEDLMNGHRWDWHGKYQFMRIDPAYQPFGIW
EECCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCEEE
RITA
EECC
>Mature Secondary Structure 
TAEKPSEQSYNPHIPLSQALLLPRIVIENTAPTLDGGQFAVKAIAGREIVVTSKVFADG
CCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCEEEEEEHHHCCC
HDKLAVRIRWREEGDETWQTEVMSDQGNNGWKGVFQPQRVGRYLFLIEAWIDQFASFQYE
CCEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHH
LEKKHTAAVPVSLELQEGRNMVQQAAERSEGQLSEQLAALHHELSGLLETEQVALFLHSR
HCCCCCEECEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECC
SAQLMAEADHRAYLSISAEFPVDVERELAEFASWYELFPRSITDDPARHGTFNDVHARLP
CHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHCC
MIQDMGFDVLYFTPIHPIGRSHRKGRNNSLTAGPDDPGSPYAIGSEEGGHEAIHSQLGTR
HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCH
EDFRRLVAAAADHGLEIALDFAIQCSQDHPWLKQHPGWFNWRPDGTIKYAENPPKKYQDI
HHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCEEEECCCCCHHHHHH
VNVDFYAPEAIPSLWVELRDIVVGWVQEGVKIFRVDNPHTKPLPFWQWLIADVRTLYPEV
HCCEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
IFLAEAFTTPAMMARLGKVGYTQSYTYFTWRNTKAELATYFSELNESPWRECYRPNFFVN
HHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCEEEE
TPDINPAFLHESGRPGFLIRAALATMGSGLWGMYSGFELCESAPVPGKEEYLDSEKYEIR
CCCCCHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEE
VRDFNQPGNIIAEIAQLNRIRRQNPALHSHLGLKIYNAWNDNILYFGKRSADGSNFILVA
EEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCEEEEECCCCCCCCEEEEE
VSLDPHNVQEANFELPLWEMGLPDDATTHGEDLMNGHRWDWHGKYQFMRIDPAYQPFGIW
EECCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCEEE
RITA
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10970853 [H]