Click here to switch to the map view.

The map label for this gene is srpB [H]

Identifier: 77458757

GI number: 77458757

Start: 2894997

End: 2895581

Strand: Direct

Name: srpB [H]

Synonym: Pfl01_2532

Alternate gene names: 77458757

Gene position: 2894997-2895581 (Clockwise)

Preceding gene: 77458753

Following gene: 77458759

Centisome position: 44.96

GC content: 62.22

Gene sequence:

>585_bases
ATGGTCGGCGCTGTCCATCCTTTATCAACTCATTACAAGGACTGGACGATGAACGCCTGGTGGCATGAAGTGTGGGAAAC
CCTGCAAGCGGAATTCGCCGACATCGGCGACGCCTCGCAGCTGACCCGGATCACCGTGCGCCTGCTGATGGCGGCGATAT
TGGGCGGGATTCTCGGGTTTGAGCGTGAACACAAGGGCAAGGCCGCCGGGGTGCGAACGCACATGCTGGTGGCACTCGGC
GCGGCGCTGTTTGTGCTGGTGCCGCAATTGTCCGGTTCCCAGGCCGATGCGATGAGCCGGGTGGTGCAGGGGGTGATTGC
CGGGATCGGCTTTCTCGGTGCCGGCACCATCCTCAAAAACCACGAAGGCGACGAAGGCCACGTCAAGGGCCTGACCACCG
CCGCCGGTTTGTGGATGACCGCCGCCATTGGCGTCGCGGCCGGGCTGGGCCGCGAGGCGACGGCGCTGCTCAGTACGTTG
CTCGCTTTGGGGATCTTCAGTGTCATGCCACGGATCGTCAGAGTCTTCGAAAAGGATCACATTGAGAAAGACCGCATCGA
GAAAGACCACAACGACCCGCGTTGA

Upstream 100 bases:

>100_bases
TTGCTTTCATCGATACGAAGGGGCATGGGGTAGTCCTTTTTCACAGGGGATCTGAACCTTTAGGGCTTGCGCTGCGCCGA
TCGTTCGACGCAACCGATTA

Downstream 100 bases:

>100_bases
TCAGACGATTACCGGCGGCATGGTCGTCGGCGGTTCCTCCTTGGGCGGTGGCGTGGTGCCCGGCGGTTCCTGTTCAGGGA
TCGGTTGCGGTTCGGTCTCG

Product: MgtC/SapB transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MVGAVHPLSTHYKDWTMNAWWHEVWETLQAEFADIGDASQLTRITVRLLMAAILGGILGFEREHKGKAAGVRTHMLVALG
AALFVLVPQLSGSQADAMSRVVQGVIAGIGFLGAGTILKNHEGDEGHVKGLTTAAGLWMTAAIGVAAGLGREATALLSTL
LALGIFSVMPRIVRVFEKDHIEKDRIEKDHNDPR

Sequences:

>Translated_194_residues
MVGAVHPLSTHYKDWTMNAWWHEVWETLQAEFADIGDASQLTRITVRLLMAAILGGILGFEREHKGKAAGVRTHMLVALG
AALFVLVPQLSGSQADAMSRVVQGVIAGIGFLGAGTILKNHEGDEGHVKGLTTAAGLWMTAAIGVAAGLGREATALLSTL
LALGIFSVMPRIVRVFEKDHIEKDRIEKDHNDPR
>Mature_194_residues
MVGAVHPLSTHYKDWTMNAWWHEVWETLQAEFADIGDASQLTRITVRLLMAAILGGILGFEREHKGKAAGVRTHMLVALG
AALFVLVPQLSGSQADAMSRVVQGVIAGIGFLGAGTILKNHEGDEGHVKGLTTAAGLWMTAAIGVAAGLGREATALLSTL
LALGIFSVMPRIVRVFEKDHIEKDRIEKDHNDPR

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=143, Percent_Identity=35.6643356643357, Blast_Score=91, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 20851; Mature: 20851

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGAVHPLSTHYKDWTMNAWWHEVWETLQAEFADIGDASQLTRITVRLLMAAILGGILGF
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
EREHKGKAAGVRTHMLVALGAALFVLVPQLSGSQADAMSRVVQGVIAGIGFLGAGTILKN
CHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
HEGDEGHVKGLTTAAGLWMTAAIGVAAGLGREATALLSTLLALGIFSVMPRIVRVFEKDH
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IEKDRIEKDHNDPR
CCHHHHHCCCCCCC
>Mature Secondary Structure
MVGAVHPLSTHYKDWTMNAWWHEVWETLQAEFADIGDASQLTRITVRLLMAAILGGILGF
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
EREHKGKAAGVRTHMLVALGAALFVLVPQLSGSQADAMSRVVQGVIAGIGFLGAGTILKN
CHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
HEGDEGHVKGLTTAAGLWMTAAIGVAAGLGREATALLSTLLALGIFSVMPRIVRVFEKDH
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IEKDRIEKDHNDPR
CCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]