| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458752
Identifier: 77458752
GI number: 77458752
Start: 2890278
End: 2890742
Strand: Direct
Name: 77458752
Synonym: Pfl01_2527
Alternate gene names: NA
Gene position: 2890278-2890742 (Clockwise)
Preceding gene: 77458751
Following gene: 77458753
Centisome position: 44.89
GC content: 57.42
Gene sequence:
>465_bases GTGATGCAAACAATCAAAAGCGGGACCTTCAAACCGACATCGCCGATGATGGCGCCACGTGCATTTCATACGGCGACCTT GCTTGCGAACGGCGATGTGCTGGTGGTCGGTGGCCTTAACGCGGACGTGGCAACTGCAGTGTCCCCTCAGTCTGTACGTG TTGAGGCGTTGCTTCCTGGCGGGATGAGCCTTGATCAGCAAGCGTACGCATCAAGCGTTGAGCGCTATGACCCGAACCAG CAAAAATGGTCATCGGCCGCACCACTTCACGGCGCACGTTGGTCTCACACTGCGCTTCTTCTTCGTTCCGGCCTGGTCAT GGTCACGGGTGGCAGCGATGGAACAACGCTGCGAAGCAGCGAGTTATACGACGTCCCGAGCAATCGATGGTTTGCATCCG CTGACCTGAAGATTCCGCGCTTTGGTCATACCGCCACGTTATTGCCGGCGAAGTGTTGGTGGTAG
Upstream 100 bases:
>100_bases ACAGTTTACGCGGCTTGCCGCCGCGCCTAGATTAGGCGCGGCGGACTTAGGCGACTCAATTCCTGTATCGCGCTGTCCGT TTCTGGCGAAGCGGGGTAGC
Downstream 100 bases:
>100_bases GTGGGAACAATCTGCAGCCGAGTGGCGGTGAGGTGCTTGACAGTGTCGAGAAGTTTGCCCCGGCAACCGGCCAATGGGCT GATATGCCCAGTCTGCCTGT
Product: kelch repeat-containing protein
Products: NA
Alternate protein names: Kelch Domain Protein; Kelch Domain-Containing Protein; NHL Repeat Containing Protein; Transposase; Kelch Motif-Containing Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MMQTIKSGTFKPTSPMMAPRAFHTATLLANGDVLVVGGLNADVATAVSPQSVRVEALLPGGMSLDQQAYASSVERYDPNQ QKWSSAAPLHGARWSHTALLLRSGLVMVTGGSDGTTLRSSELYDVPSNRWFASADLKIPRFGHTATLLPAKCWW
Sequences:
>Translated_154_residues MMQTIKSGTFKPTSPMMAPRAFHTATLLANGDVLVVGGLNADVATAVSPQSVRVEALLPGGMSLDQQAYASSVERYDPNQ QKWSSAAPLHGARWSHTALLLRSGLVMVTGGSDGTTLRSSELYDVPSNRWFASADLKIPRFGHTATLLPAKCWW >Mature_154_residues MMQTIKSGTFKPTSPMMAPRAFHTATLLANGDVLVVGGLNADVATAVSPQSVRVEALLPGGMSLDQQAYASSVERYDPNQ QKWSSAAPLHGARWSHTALLLRSGLVMVTGGSDGTTLRSSELYDVPSNRWFASADLKIPRFGHTATLLPAKCWW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16557; Mature: 16557
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQTIKSGTFKPTSPMMAPRAFHTATLLANGDVLVVGGLNADVATAVSPQSVRVEALLPG CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCEEEECCCCCEEEEEECCC GMSLDQQAYASSVERYDPNQQKWSSAAPLHGARWSHTALLLRSGLVMVTGGSDGTTLRSS CCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCEEECC ELYDVPSNRWFASADLKIPRFGHTATLLPAKCWW EEEECCCCCEEEECCEECCCCCCCEEECCCCCCC >Mature Secondary Structure MMQTIKSGTFKPTSPMMAPRAFHTATLLANGDVLVVGGLNADVATAVSPQSVRVEALLPG CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCEEEECCCCCEEEEEECCC GMSLDQQAYASSVERYDPNQQKWSSAAPLHGARWSHTALLLRSGLVMVTGGSDGTTLRSS CCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCEEECC ELYDVPSNRWFASADLKIPRFGHTATLLPAKCWW EEEECCCCCEEEECCEECCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA