Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is ytnP [H]

Identifier: 77458679

GI number: 77458679

Start: 2807923

End: 2808882

Strand: Direct

Name: ytnP [H]

Synonym: Pfl01_2454

Alternate gene names: 77458679

Gene position: 2807923-2808882 (Clockwise)

Preceding gene: 77458675

Following gene: 77458685

Centisome position: 43.61

GC content: 63.23

Gene sequence:

>960_bases
ATGTCAACGTATCTGAATCACTCCAATCAAACCAACGCAACCGATGACCGGCAGGCGTCCGTCACCCGCCAGCCATTCGC
TCCGGCGCAGGAGCTGGTGCCATCGCGCTACGCACTGCAGGTCGGCGACATCGACGTGGTGGTGATCAGCGACGGCGTGC
TGCCGCTGCCGACCTCGACCATGTCCACAAATGCCGACCCGCAGGCTCGCGCCGCCTGGTTCAAGGACATGTTCCTGGGG
CCGGACGCGTTTGACTGGGCACTCAACGTGCTGGTGGTGCGCAGCGGCGAGCAGATCATTCTGGTCGACGCCGGACTGGG
CGGGCAGTTTCCCGGCTTCCCCCGGGCCGGCCAGTTGCCGAAACGCCTGGAAGCGGCGGGCATTGATCTGGCCAGCGTGA
CTGACATTGTGATCACGCACATGCACATGGACCATGTCGGCGGTCTGCTGGTCGACGAGGTGAAGAGCCGGTTGCGTGCG
GATGTGCGCATTCACGTCTCGGCAAAAGAGGTCGAGTTCTGGGAGACGCCGGACTTCACCCAGACCGTCATGCCGGCGCC
AGTGCCTGACGTTCTGCGCGCGACGGCCAATCAGTTCATCAACGATTACCGCCGCCAGGTGCGCACCTTCGAGGATGAAT
ACGAAGTGGCGCCGGGGGTGGTGGTGAAACTCACCGGCGGGCATACGCCGGGGCACAGCATTGTCTACGTCAACTCGGGC
GGCGAACGCCTGACCTTTGCTGGCGACGCCCTGTTTCCGGTGGCCTTCGAGCATCCGGAATGGCACAACGGTTTCGAGCA
TGATCCTGAAGAGTCGGTGCGTGTTCGCATGCGTCTGATGCGCGAAGCGGCGGCTAGTGGCGAGTGGTTTGTTGCCACCC
ATCTGCCGTTCCCGTCGGTAGGTCGAGTGGCGGTCGATGGCGATGCGTTCCGCTGGATTGCAGCGTTCTGGGATTACTGA

Upstream 100 bases:

>100_bases
GGTCGCGATGCACACTCGATTTCAAGGCGCGCCATTCAGCGCTTGCGCCAGCAAGGGCATTCGTCCGGGAAATTTTGACT
CAGCCAAGAGGAAAGCGACC

Downstream 100 bases:

>100_bases
TCGGCTGTCGGCGGCCCGGCTGCATTCTGCCGGGCTCGATAAAAATCAGGCCCCGCAAGTGATGAGCTTGCGGGGCCTTT
TTTTGCTTTGAGGTTTGTTG

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSTYLNHSNQTNATDDRQASVTRQPFAPAQELVPSRYALQVGDIDVVVISDGVLPLPTSTMSTNADPQARAAWFKDMFLG
PDAFDWALNVLVVRSGEQIILVDAGLGGQFPGFPRAGQLPKRLEAAGIDLASVTDIVITHMHMDHVGGLLVDEVKSRLRA
DVRIHVSAKEVEFWETPDFTQTVMPAPVPDVLRATANQFINDYRRQVRTFEDEYEVAPGVVVKLTGGHTPGHSIVYVNSG
GERLTFAGDALFPVAFEHPEWHNGFEHDPEESVRVRMRLMREAAASGEWFVATHLPFPSVGRVAVDGDAFRWIAAFWDY

Sequences:

>Translated_319_residues
MSTYLNHSNQTNATDDRQASVTRQPFAPAQELVPSRYALQVGDIDVVVISDGVLPLPTSTMSTNADPQARAAWFKDMFLG
PDAFDWALNVLVVRSGEQIILVDAGLGGQFPGFPRAGQLPKRLEAAGIDLASVTDIVITHMHMDHVGGLLVDEVKSRLRA
DVRIHVSAKEVEFWETPDFTQTVMPAPVPDVLRATANQFINDYRRQVRTFEDEYEVAPGVVVKLTGGHTPGHSIVYVNSG
GERLTFAGDALFPVAFEHPEWHNGFEHDPEESVRVRMRLMREAAASGEWFVATHLPFPSVGRVAVDGDAFRWIAAFWDY
>Mature_318_residues
STYLNHSNQTNATDDRQASVTRQPFAPAQELVPSRYALQVGDIDVVVISDGVLPLPTSTMSTNADPQARAAWFKDMFLGP
DAFDWALNVLVVRSGEQIILVDAGLGGQFPGFPRAGQLPKRLEAAGIDLASVTDIVITHMHMDHVGGLLVDEVKSRLRAD
VRIHVSAKEVEFWETPDFTQTVMPAPVPDVLRATANQFINDYRRQVRTFEDEYEVAPGVVVKLTGGHTPGHSIVYVNSGG
ERLTFAGDALFPVAFEHPEWHNGFEHDPEESVRVRMRLMREAAASGEWFVATHLPFPSVGRVAVDGDAFRWIAAFWDY

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 35293; Mature: 35162

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTYLNHSNQTNATDDRQASVTRQPFAPAQELVPSRYALQVGDIDVVVISDGVLPLPTST
CCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCEEEEECCEEEEEEECCCCCCCCCC
MSTNADPQARAAWFKDMFLGPDAFDWALNVLVVRSGEQIILVDAGLGGQFPGFPRAGQLP
CCCCCCCHHHHHHHHHHHCCCCHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCH
KRLEAAGIDLASVTDIVITHMHMDHVGGLLVDEVKSRLRADVRIHVSAKEVEFWETPDFT
HHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCCHH
QTVMPAPVPDVLRATANQFINDYRRQVRTFEDEYEVAPGVVVKLTGGHTPGHSIVYVNSG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCEEEEEECC
GERLTFAGDALFPVAFEHPEWHNGFEHDPEESVRVRMRLMREAAASGEWFVATHLPFPSV
CCEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
GRVAVDGDAFRWIAAFWDY
CEEEECCCHHHHHHHHHCC
>Mature Secondary Structure 
STYLNHSNQTNATDDRQASVTRQPFAPAQELVPSRYALQVGDIDVVVISDGVLPLPTST
CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCEEEEECCEEEEEEECCCCCCCCCC
MSTNADPQARAAWFKDMFLGPDAFDWALNVLVVRSGEQIILVDAGLGGQFPGFPRAGQLP
CCCCCCCHHHHHHHHHHHCCCCHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCH
KRLEAAGIDLASVTDIVITHMHMDHVGGLLVDEVKSRLRADVRIHVSAKEVEFWETPDFT
HHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCCHH
QTVMPAPVPDVLRATANQFINDYRRQVRTFEDEYEVAPGVVVKLTGGHTPGHSIVYVNSG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCEEEEEECC
GERLTFAGDALFPVAFEHPEWHNGFEHDPEESVRVRMRLMREAAASGEWFVATHLPFPSV
CCEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
GRVAVDGDAFRWIAAFWDY
CEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]