| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458654
Identifier: 77458654
GI number: 77458654
Start: 2783567
End: 2784469
Strand: Direct
Name: 77458654
Synonym: Pfl01_2429
Alternate gene names: NA
Gene position: 2783567-2784469 (Clockwise)
Preceding gene: 77458653
Following gene: 77458655
Centisome position: 43.23
GC content: 40.75
Gene sequence:
>903_bases ATGGCAGAGACTGTTAAAGCGGTTAAAGCTCATGGCTCCTACGAGGCGCGAGACCTGATTTCGTATCTTTCTATAATTTA CTCACTTTCCGATGAGCCTACTGGTCCACGCTGTTATCGTGGCCAGTCTGTTAGTTCCTGGAAAGTTAAGCCTTCTGTGA TGAGGGAGCTGAGGTCTGATGCGGAACGTCAGATACTTAGCGAACTTTTAGTAGAGGCGCCGAATGAGTTTGGTTCAGAT AAAAGCATGTTTGATAAGTTGGTTCGTGCACAGCATTATAGCCTGCCTACACGACTTCTTGATGTTACTTTAAATCCACT TGTAGGGCTGTACTTTGCGTGCGAAGAAGAGAAATTTCAGTCTGAAGATGGTGTGGTTCAAGTATTTGATTTTCAGAAAG GTAGGGAAAAATTTTCAGACAGTGACACGGTTAGTGTTATATGTAATTTATCTAGACTTTCTGATGTCGAAAAAAAGAAA ATAATTAATAGATACGATGTGGTTGGACCAAGAGTGGCGGATTGGAGCGAGTCGAATAAGAAAATGTTTAGGCTGATGCC TGAGGTGAAGAGGTTGATGCAATTTGTGCGGGTTGAGAAGCCCTATTTTCTAGACAAGATCAATCCATTGGATTTATTCA GGTATTATTTTGTTTATCCTTCAAAAAACAACAGGCGAGTAATAGCTCAATCGGGTGCATTTATAGCTGCTGGGCTTTTG CAATATCATTCGCTCGAACAGTCGGCTGGGCTGAAGCACAAAAAAATTATAATTCCATGTCAATGTAAGAAGAAAATAGT AGCTCAGCTTGATGCTTTGAATATCAACTCAAGAACTATGTTTCCTGAGGTTGAGTTTACTTCAAAATACATAAAGAAGA AGTGGGCCGTTGGTTCGGATTGA
Upstream 100 bases:
>100_bases CGGGGTGGGGAATATTTCTAAAAAGAGGGGGTGGGGTTGTTTCAGAAATAAGCTGTCCCCATAGGTGTTTTATATTAACA GATAATGTAAAGGCTCTATA
Downstream 100 bases:
>100_bases TTTTGTAGATGCTTTACAATTTTTTTCCTCTTATGCCTTAGTTTTCAGAGGTGGGGGAGAAAAGGTTTCTGAAGAGAAGG TGGCAGATTTATTTTCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: FRG Domain-Containing Protein
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAETVKAVKAHGSYEARDLISYLSIIYSLSDEPTGPRCYRGQSVSSWKVKPSVMRELRSDAERQILSELLVEAPNEFGSD KSMFDKLVRAQHYSLPTRLLDVTLNPLVGLYFACEEEKFQSEDGVVQVFDFQKGREKFSDSDTVSVICNLSRLSDVEKKK IINRYDVVGPRVADWSESNKKMFRLMPEVKRLMQFVRVEKPYFLDKINPLDLFRYYFVYPSKNNRRVIAQSGAFIAAGLL QYHSLEQSAGLKHKKIIIPCQCKKKIVAQLDALNINSRTMFPEVEFTSKYIKKKWAVGSD
Sequences:
>Translated_300_residues MAETVKAVKAHGSYEARDLISYLSIIYSLSDEPTGPRCYRGQSVSSWKVKPSVMRELRSDAERQILSELLVEAPNEFGSD KSMFDKLVRAQHYSLPTRLLDVTLNPLVGLYFACEEEKFQSEDGVVQVFDFQKGREKFSDSDTVSVICNLSRLSDVEKKK IINRYDVVGPRVADWSESNKKMFRLMPEVKRLMQFVRVEKPYFLDKINPLDLFRYYFVYPSKNNRRVIAQSGAFIAAGLL QYHSLEQSAGLKHKKIIIPCQCKKKIVAQLDALNINSRTMFPEVEFTSKYIKKKWAVGSD >Mature_299_residues AETVKAVKAHGSYEARDLISYLSIIYSLSDEPTGPRCYRGQSVSSWKVKPSVMRELRSDAERQILSELLVEAPNEFGSDK SMFDKLVRAQHYSLPTRLLDVTLNPLVGLYFACEEEKFQSEDGVVQVFDFQKGREKFSDSDTVSVICNLSRLSDVEKKKI INRYDVVGPRVADWSESNKKMFRLMPEVKRLMQFVRVEKPYFLDKINPLDLFRYYFVYPSKNNRRVIAQSGAFIAAGLLQ YHSLEQSAGLKHKKIIIPCQCKKKIVAQLDALNINSRTMFPEVEFTSKYIKKKWAVGSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34494; Mature: 34363
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETVKAVKAHGSYEARDLISYLSIIYSLSDEPTGPRCYRGQSVSSWKVKPSVMRELRSD CCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AERQILSELLVEAPNEFGSDKSMFDKLVRAQHYSLPTRLLDVTLNPLVGLYFACEEEKFQ HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHC SEDGVVQVFDFQKGREKFSDSDTVSVICNLSRLSDVEKKKIINRYDVVGPRVADWSESNK CCCCEEEEEECHHHHHHCCCCCHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH KMFRLMPEVKRLMQFVRVEKPYFLDKINPLDLFRYYFVYPSKNNRRVIAQSGAFIAAGLL HHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHEEEEEEEECCCCCEEEEECCCHHHHHHH QYHSLEQSAGLKHKKIIIPCQCKKKIVAQLDALNINSRTMFPEVEFTSKYIKKKWAVGSD HHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure AETVKAVKAHGSYEARDLISYLSIIYSLSDEPTGPRCYRGQSVSSWKVKPSVMRELRSD CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AERQILSELLVEAPNEFGSDKSMFDKLVRAQHYSLPTRLLDVTLNPLVGLYFACEEEKFQ HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHC SEDGVVQVFDFQKGREKFSDSDTVSVICNLSRLSDVEKKKIINRYDVVGPRVADWSESNK CCCCEEEEEECHHHHHHCCCCCHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH KMFRLMPEVKRLMQFVRVEKPYFLDKINPLDLFRYYFVYPSKNNRRVIAQSGAFIAAGLL HHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHEEEEEEEECCCCCEEEEECCCHHHHHHH QYHSLEQSAGLKHKKIIIPCQCKKKIVAQLDALNINSRTMFPEVEFTSKYIKKKWAVGSD HHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA