Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
---|---|
Accession | NC_007492 |
Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is yeaS [C]
Identifier: 77457549
GI number: 77457549
Start: 1496203
End: 1496841
Strand: Direct
Name: yeaS [C]
Synonym: Pfl01_1322
Alternate gene names: 77457549
Gene position: 1496203-1496841 (Clockwise)
Preceding gene: 77457548
Following gene: 77457550
Centisome position: 23.24
GC content: 64.95
Gene sequence:
>639_bases ATGACTCCATCGTTGCTAATGGCCGTGCTGGCCTCCGGTTTCATCTACGGCATCACGCCGGGGCCGGGTGTGCTGGCGGT GTTCGGCATCGGCGCCGCGCGCGGGCGGCGGGCCGGGGCGGGGTTTCTGTGTGGGCATCTGCTGGGCGATGTGATCTGGT GCAGCACTGCGCTGATCGCGATTGTCGGCGCCCGGGAAATCGGCAGCACCGCTTTCGATGTGCTCGGTGTGCTCAGCGGC CTGTACCTGTTCTGGCTCGGCTGGCGTGCAGTGCGGGCCAAACGCAGTAACGGCGAGCAGCCGCAGGGCGCGGCGCGTCA GCCGTTCTGGCACGGCATTCTGTTCGGCCTGACCAACCCCAAGGCCTACCCGGTGGCGGTGGCGACCTTCACTGCGTTGC TGTCGAGCCGCGCCGAACTGCTCAACTGGTCGATGCTGCCGATGCTGATCGCCTTGAGTTTCCTCGGCGGATTGCTCGCC TACGCTATCCTCATTGGCATCGTCGGGGCGCGCCAGGTGCGTACGTTGTACCAGCGTCATGAACTGGCGATCACCCGGTT GTGCGGGATCATGTTCATCGGTTTTGCCATCAACGCGCTGGTGCATGCGCTGCCAGGGCTGATACCGAACAAGGCTTGA
Upstream 100 bases:
>100_bases AAAGCCCTACGCGGGCATGGGTTTTTTCAACGAGCCGTGATCATCCGTTAATCGCTGATATAGACTGGCGGCCACGTTTT CCGGGACTTGCAGGTTTTCC
Downstream 100 bases:
>100_bases AAACAGTCGCAGGGATGCGAGGTCGAGGTCATGGATGGTTGAACAGTGCTGCATTGCCCGGACACCCACGCTGAACCATG GAAAGCCGAGATTCCGCGCC
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: Lysine Exporter Protein LysE/YggA; Transporter-Like Protein; Amino Acid Efflux Protein; LysE Type Translocator; Threonine Efflux Protein; LysE Family Amino Acid Efflux Protein
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTPSLLMAVLASGFIYGITPGPGVLAVFGIGAARGRRAGAGFLCGHLLGDVIWCSTALIAIVGAREIGSTAFDVLGVLSG LYLFWLGWRAVRAKRSNGEQPQGAARQPFWHGILFGLTNPKAYPVAVATFTALLSSRAELLNWSMLPMLIALSFLGGLLA YAILIGIVGARQVRTLYQRHELAITRLCGIMFIGFAINALVHALPGLIPNKA
Sequences:
>Translated_212_residues MTPSLLMAVLASGFIYGITPGPGVLAVFGIGAARGRRAGAGFLCGHLLGDVIWCSTALIAIVGAREIGSTAFDVLGVLSG LYLFWLGWRAVRAKRSNGEQPQGAARQPFWHGILFGLTNPKAYPVAVATFTALLSSRAELLNWSMLPMLIALSFLGGLLA YAILIGIVGARQVRTLYQRHELAITRLCGIMFIGFAINALVHALPGLIPNKA >Mature_211_residues TPSLLMAVLASGFIYGITPGPGVLAVFGIGAARGRRAGAGFLCGHLLGDVIWCSTALIAIVGAREIGSTAFDVLGVLSGL YLFWLGWRAVRAKRSNGEQPQGAARQPFWHGILFGLTNPKAYPVAVATFTALLSSRAELLNWSMLPMLIALSFLGGLLAY AILIGIVGARQVRTLYQRHELAITRLCGIMFIGFAINALVHALPGLIPNKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22458; Mature: 22327
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSLLMAVLASGFIYGITPGPGVLAVFGIGAARGRRAGAGFLCGHLLGDVIWCSTALIA CCHHHHHHHHHCCCEEECCCCCCHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHH IVGAREIGSTAFDVLGVLSGLYLFWLGWRAVRAKRSNGEQPQGAARQPFWHGILFGLTNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCC KAYPVAVATFTALLSSRAELLNWSMLPMLIALSFLGGLLAYAILIGIVGARQVRTLYQRH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELAITRLCGIMFIGFAINALVHALPGLIPNKA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TPSLLMAVLASGFIYGITPGPGVLAVFGIGAARGRRAGAGFLCGHLLGDVIWCSTALIA CHHHHHHHHHCCCEEECCCCCCHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHH IVGAREIGSTAFDVLGVLSGLYLFWLGWRAVRAKRSNGEQPQGAARQPFWHGILFGLTNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCC KAYPVAVATFTALLSSRAELLNWSMLPMLIALSFLGGLLAYAILIGIVGARQVRTLYQRH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELAITRLCGIMFIGFAINALVHALPGLIPNKA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA