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The map label for this gene is yfdE [H]

Identifier: 77457541

GI number: 77457541

Start: 1489164

End: 1490357

Strand: Direct

Name: yfdE [H]

Synonym: Pfl01_1314

Alternate gene names: 77457541

Gene position: 1489164-1490357 (Clockwise)

Preceding gene: 77457540

Following gene: 77457542

Centisome position: 23.13

GC content: 64.49

Gene sequence:

>1194_bases
ATGACTGCCCCTTTGAGTGCGATCAAAGTGATCGAAATCGGCACCCTGATCGCTGCGCCGTTTGCCGCGCGCATGCTCGC
CGAATTCGGCGCCGAAGTGATCAAGATCGAAGCCATGGGTCAGGGCGACCCGCTGCGCAAATGGCGCAAGCTGCACGAAG
GGACGTCGCTGTGGTGGTACCTGCAATCGCGCAACAAGAAATCCCTGGCGCTCAATCTGAAATCCGCCGAAGGCATCGAG
CTGGTCAAGCAACTGGCGCGCGATGCCGACGTGATCATCGAAAACCTGCGCCCCGGCGCCCTGGAAAAACTTGGCCTGGG
CTGGAACGTGCTGCACGGCCTGAACCCCAACTTGACCCTGGTGCGCATTTCCGGCTACGGCCAGACCGGCCCCTACCGTG
ACCGCCCCGGTTTCGGTGCGATCGGCGAGGCCATGGGGGGCATTCGCTACACCACCGGCACTCCCGGTTCACCGCCGGCG
CGGGTCGGAGTCAGCCTCGGCGACTCACTGGCTTCGCTGCACGCGGTGATCGGCGCGCTGATGTCGCTGCTGCGGGTCAA
GACCGGGCAGGGCGGCGGGCAGGTTGTCGATGTGTCGCTGGCCGAAAGCGTGTTCAACGTCATGGAAAGCCTGGTGCCGG
AATACGACATGCTCGGCCATGTCCGCGAACGCAGTGGCGGCGCGTTGCCGGGCATCGCACCTTCCAATACTTACCTCACG
GCTGACGGCGCCTACGTGGTGATCGCCGGCAACAGCGACCCGATCTACAAGCGCCTGATGCAGGTGATCGGTCGGGATGA
TCTGGCCGAAGCCGAAGAATTCGCCCACAACGACGGTCGTGCCGCAAAGAGCGGTCTGCTCGACGCTGCCATCACCCACT
GGACGAGCAGCCTGCCGATCGATGACGTATTGGCGGCGCTGGAAGCCGCCGAAGTGCCGGCTGGCCGCATCTACTCGGTG
GCCGATATCGTTGCCGATCCGCACTATCAGGCCCGGGACATGTTGCTTGACGCCGCGTTGCCCGGCGGGGCGACCGTGAA
GATGCCGGGCATCGTGCCCAAACTCTCGGAAACCCCCGGTGGTGTGAACTGGTCGGGCCCCGGCCTCGGTCAGCACACCG
ATGGCATCCTCGCCGGTCTCGGCCTGACCGCTTCTGACATCGAACGCCTGAAAAACCGGGGGGTGGTGCAATGA

Upstream 100 bases:

>100_bases
TTCGCGTTTGGCGAACGGCCGTTGCCGAGTGACGGCTGGATCGCAGCCATGACGTTCCTCTAGCCTTGGCCGCAATTCCA
AGAACAAGAGGTACCCCGCG

Downstream 100 bases:

>100_bases
TCAGCGATTACTCGCAGACCCTGATCGTCCAGGAAGTCTCGCCCCGGGACGGCCTGCAGATCGAGCCGACCTGGGTCGAG
ACCGAAGACAAGATCGCCCT

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTAPLSAIKVIEIGTLIAAPFAARMLAEFGAEVIKIEAMGQGDPLRKWRKLHEGTSLWWYLQSRNKKSLALNLKSAEGIE
LVKQLARDADVIIENLRPGALEKLGLGWNVLHGLNPNLTLVRISGYGQTGPYRDRPGFGAIGEAMGGIRYTTGTPGSPPA
RVGVSLGDSLASLHAVIGALMSLLRVKTGQGGGQVVDVSLAESVFNVMESLVPEYDMLGHVRERSGGALPGIAPSNTYLT
ADGAYVVIAGNSDPIYKRLMQVIGRDDLAEAEEFAHNDGRAAKSGLLDAAITHWTSSLPIDDVLAALEAAEVPAGRIYSV
ADIVADPHYQARDMLLDAALPGGATVKMPGIVPKLSETPGGVNWSGPGLGQHTDGILAGLGLTASDIERLKNRGVVQ

Sequences:

>Translated_397_residues
MTAPLSAIKVIEIGTLIAAPFAARMLAEFGAEVIKIEAMGQGDPLRKWRKLHEGTSLWWYLQSRNKKSLALNLKSAEGIE
LVKQLARDADVIIENLRPGALEKLGLGWNVLHGLNPNLTLVRISGYGQTGPYRDRPGFGAIGEAMGGIRYTTGTPGSPPA
RVGVSLGDSLASLHAVIGALMSLLRVKTGQGGGQVVDVSLAESVFNVMESLVPEYDMLGHVRERSGGALPGIAPSNTYLT
ADGAYVVIAGNSDPIYKRLMQVIGRDDLAEAEEFAHNDGRAAKSGLLDAAITHWTSSLPIDDVLAALEAAEVPAGRIYSV
ADIVADPHYQARDMLLDAALPGGATVKMPGIVPKLSETPGGVNWSGPGLGQHTDGILAGLGLTASDIERLKNRGVVQ
>Mature_396_residues
TAPLSAIKVIEIGTLIAAPFAARMLAEFGAEVIKIEAMGQGDPLRKWRKLHEGTSLWWYLQSRNKKSLALNLKSAEGIEL
VKQLARDADVIIENLRPGALEKLGLGWNVLHGLNPNLTLVRISGYGQTGPYRDRPGFGAIGEAMGGIRYTTGTPGSPPAR
VGVSLGDSLASLHAVIGALMSLLRVKTGQGGGQVVDVSLAESVFNVMESLVPEYDMLGHVRERSGGALPGIAPSNTYLTA
DGAYVVIAGNSDPIYKRLMQVIGRDDLAEAEEFAHNDGRAAKSGLLDAAITHWTSSLPIDDVLAALEAAEVPAGRIYSVA
DIVADPHYQARDMLLDAALPGGATVKMPGIVPKLSETPGGVNWSGPGLGQHTDGILAGLGLTASDIERLKNRGVVQ

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=375, Percent_Identity=31.2, Blast_Score=185, Evalue=5e-47,
Organism=Homo sapiens, GI300863124, Length=403, Percent_Identity=31.0173697270471, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI13376042, Length=403, Percent_Identity=27.5434243176179, Blast_Score=128, Evalue=9e-30,
Organism=Homo sapiens, GI300863126, Length=151, Percent_Identity=41.0596026490066, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI266456254, Length=401, Percent_Identity=25.4364089775561, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI42794625, Length=401, Percent_Identity=25.4364089775561, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI266458393, Length=298, Percent_Identity=29.1946308724832, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI266458397, Length=260, Percent_Identity=30, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI266458395, Length=128, Percent_Identity=34.375, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI42822893, Length=128, Percent_Identity=34.375, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI87082093, Length=353, Percent_Identity=32.0113314447592, Blast_Score=191, Evalue=7e-50,
Organism=Escherichia coli, GI1788717, Length=427, Percent_Identity=27.6346604215457, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1786222, Length=404, Percent_Identity=27.7227722772277, Blast_Score=135, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI115535051, Length=313, Percent_Identity=30.9904153354633, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI32564160, Length=274, Percent_Identity=30.6569343065693, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24648431, Length=402, Percent_Identity=31.592039800995, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24585488, Length=360, Percent_Identity=27.2222222222222, Blast_Score=104, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 41813; Mature: 41682

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPLSAIKVIEIGTLIAAPFAARMLAEFGAEVIKIEAMGQGDPLRKWRKLHEGTSLWWY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE
LQSRNKKSLALNLKSAEGIELVKQLARDADVIIENLRPGALEKLGLGWNVLHGLNPNLTL
EECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCCCEEE
VRISGYGQTGPYRDRPGFGAIGEAMGGIRYTTGTPGSPPARVGVSLGDSLASLHAVIGAL
EEEECCCCCCCCCCCCCCCCHHHHHCCEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHH
MSLLRVKTGQGGGQVVDVSLAESVFNVMESLVPEYDMLGHVRERSGGALPGIAPSNTYLT
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEE
ADGAYVVIAGNSDPIYKRLMQVIGRDDLAEAEEFAHNDGRAAKSGLLDAAITHWTSSLPI
ECCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCH
DDVLAALEAAEVPAGRIYSVADIVADPHYQARDMLLDAALPGGATVKMPGIVPKLSETPG
HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC
GVNWSGPGLGQHTDGILAGLGLTASDIERLKNRGVVQ
CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
TAPLSAIKVIEIGTLIAAPFAARMLAEFGAEVIKIEAMGQGDPLRKWRKLHEGTSLWWY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE
LQSRNKKSLALNLKSAEGIELVKQLARDADVIIENLRPGALEKLGLGWNVLHGLNPNLTL
EECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCCCEEE
VRISGYGQTGPYRDRPGFGAIGEAMGGIRYTTGTPGSPPARVGVSLGDSLASLHAVIGAL
EEEECCCCCCCCCCCCCCCCHHHHHCCEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHH
MSLLRVKTGQGGGQVVDVSLAESVFNVMESLVPEYDMLGHVRERSGGALPGIAPSNTYLT
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEE
ADGAYVVIAGNSDPIYKRLMQVIGRDDLAEAEEFAHNDGRAAKSGLLDAAITHWTSSLPI
ECCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCH
DDVLAALEAAEVPAGRIYSVADIVADPHYQARDMLLDAALPGGATVKMPGIVPKLSETPG
HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC
GVNWSGPGLGQHTDGILAGLGLTASDIERLKNRGVVQ
CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]