| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457372
Identifier: 77457372
GI number: 77457372
Start: 1321833
End: 1322999
Strand: Direct
Name: 77457372
Synonym: Pfl01_1145
Alternate gene names: NA
Gene position: 1321833-1322999 (Clockwise)
Preceding gene: 77457371
Following gene: 77457373
Centisome position: 20.53
GC content: 60.75
Gene sequence:
>1167_bases ATGGCTGAGGTTCTGAACTTCGAGCACAACGGCATTACCGTCAATGCCACCGAGTCCCCCGAGGCCATGGGTGGCCTGGG TGACAACGTCATCGGTCTGGTCGGCACCGCGCCGAAAGCCGATCCGCTGATTCCGCGCAACGCACCGTTTCGCATCAACA GCTTCACTACCCACGCGCTGCTCGATCCGACCGGCTCGGAAGAGGGCACCCTGTACCATGCGGTTTACCAGATCCTCAAA GTGGTCAAGGTGCCGGTGTACGTGGTGATCGTCGAAGCGGGCGCAACCCCGGCCGATACCGTCAACGCGGTGATCGGCGG CGTTGATCCAACCACCGGTCGCAAACTCGGTCTGGCCGCACTGGGCAGTGTCCCGGAAGACCTGACCATCATCGGCGCGC CGGGCTTCACCGGCACCAAGGCTGTGGCCAGCGAGTTCGCCTCGTTCGGCAAGCGCATCAAGGCCCGTGTGGTGCTGGAC GGCAAGGACGTCTCGGTTGCCGACCAAGTGCTGTACAGCCAGGAGCTGGGCGGTGCGGATCTGGGTTTTGATCGTTGCCT GGTGGTGCACAACATGCCGGCCGTGTACTCGAAAGCGGCGAAGAAAAACGTGTTCCTCGCGCCATCGAGCCTGGCGATTG CCGCGCTGGCCAAGGTCAAGCAATGGGAAAGCCCGGGCAACCAGGTGACCTACGCCGAAGACGTGTCCCGGGTCGTTGAG TACAACATCCTCGACACCTCCACCGAAGGCGATCTGCTTAACCGCTACGGCGTCAGCTATTACGCCCGCACCATCCTTGG CGGCTTCTCGCTGCTGGGCAACCGTTCGATCACCGGCAAGTTCATCAGCTACGTCGGTCTTGAAGACGCCATCAGCCGCA AGCTGGTGAAGGCCGGCCAGAAAGCCATGGCGAAGAACCTGACCAAGTCGTTCATGGATCAGGAAGTCAAACGCATCAAC GACTGGCTGCAAACCCTGGTCGCCGACGAAACCATTCCCGGCGGCAGCGTATATCTGCACCCGGAACTCAACAGCGTCGA GAAGTACAAGAACGGCACCTGGTACGTGGTCATCGACTACGGCCGCTACGCGCCGAACGAACACATGGTTTATCAACTCA ACGCCCGCGATGAAATCATCGAGCAGTTCCTGGAGGACGTTCTCTAA
Upstream 100 bases:
>100_bases TCGACGTCGAAGCCAGCGCATTGCACAGCGCCGGTCGACTGGAGCTGAAAACACCTACCACCAAGGCCGTGAAGGCCGCT GCCAAGAAGGCTGACTGACT
Downstream 100 bases:
>100_bases TGTTTACCAACCGCGTAAGACAGGCCATCGCGGCCACCCTGCAAGGCCTGCCGCTGTCGGCGACCGTGGAGGAATTCACT CCGCCGAAGATCGACTTCGA
Product: Phage tail sheath protein FI-like
Products: NA
Alternate protein names: Phage Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein; Phage Tail-Like Protein; Tail Sheath Protein FI
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MAEVLNFEHNGITVNATESPEAMGGLGDNVIGLVGTAPKADPLIPRNAPFRINSFTTHALLDPTGSEEGTLYHAVYQILK VVKVPVYVVIVEAGATPADTVNAVIGGVDPTTGRKLGLAALGSVPEDLTIIGAPGFTGTKAVASEFASFGKRIKARVVLD GKDVSVADQVLYSQELGGADLGFDRCLVVHNMPAVYSKAAKKNVFLAPSSLAIAALAKVKQWESPGNQVTYAEDVSRVVE YNILDTSTEGDLLNRYGVSYYARTILGGFSLLGNRSITGKFISYVGLEDAISRKLVKAGQKAMAKNLTKSFMDQEVKRIN DWLQTLVADETIPGGSVYLHPELNSVEKYKNGTWYVVIDYGRYAPNEHMVYQLNARDEIIEQFLEDVL
Sequences:
>Translated_388_residues MAEVLNFEHNGITVNATESPEAMGGLGDNVIGLVGTAPKADPLIPRNAPFRINSFTTHALLDPTGSEEGTLYHAVYQILK VVKVPVYVVIVEAGATPADTVNAVIGGVDPTTGRKLGLAALGSVPEDLTIIGAPGFTGTKAVASEFASFGKRIKARVVLD GKDVSVADQVLYSQELGGADLGFDRCLVVHNMPAVYSKAAKKNVFLAPSSLAIAALAKVKQWESPGNQVTYAEDVSRVVE YNILDTSTEGDLLNRYGVSYYARTILGGFSLLGNRSITGKFISYVGLEDAISRKLVKAGQKAMAKNLTKSFMDQEVKRIN DWLQTLVADETIPGGSVYLHPELNSVEKYKNGTWYVVIDYGRYAPNEHMVYQLNARDEIIEQFLEDVL >Mature_387_residues AEVLNFEHNGITVNATESPEAMGGLGDNVIGLVGTAPKADPLIPRNAPFRINSFTTHALLDPTGSEEGTLYHAVYQILKV VKVPVYVVIVEAGATPADTVNAVIGGVDPTTGRKLGLAALGSVPEDLTIIGAPGFTGTKAVASEFASFGKRIKARVVLDG KDVSVADQVLYSQELGGADLGFDRCLVVHNMPAVYSKAAKKNVFLAPSSLAIAALAKVKQWESPGNQVTYAEDVSRVVEY NILDTSTEGDLLNRYGVSYYARTILGGFSLLGNRSITGKFISYVGLEDAISRKLVKAGQKAMAKNLTKSFMDQEVKRIND WLQTLVADETIPGGSVYLHPELNSVEKYKNGTWYVVIDYGRYAPNEHMVYQLNARDEIIEQFLEDVL
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41876; Mature: 41745
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVLNFEHNGITVNATESPEAMGGLGDNVIGLVGTAPKADPLIPRNAPFRINSFTTHAL CCCCEEECCCCEEEECCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCEEEEE LDPTGSEEGTLYHAVYQILKVVKVPVYVVIVEAGATPADTVNAVIGGVDPTTGRKLGLAA ECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCEECHHH LGSVPEDLTIIGAPGFTGTKAVASEFASFGKRIKARVVLDGKDVSVADQVLYSQELGGAD HCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCC LGFDRCLVVHNMPAVYSKAAKKNVFLAPSSLAIAALAKVKQWESPGNQVTYAEDVSRVVE CCCCCEEEEECCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH YNILDTSTEGDLLNRYGVSYYARTILGGFSLLGNRSITGKFISYVGLEDAISRKLVKAGQ EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHH KAMAKNLTKSFMDQEVKRINDWLQTLVADETIPGGSVYLHPELNSVEKYKNGTWYVVIDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCEEEEEEC GRYAPNEHMVYQLNARDEIIEQFLEDVL CCCCCCCCEEEEECCHHHHHHHHHHHCC >Mature Secondary Structure AEVLNFEHNGITVNATESPEAMGGLGDNVIGLVGTAPKADPLIPRNAPFRINSFTTHAL CCCEEECCCCEEEECCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCEEEEE LDPTGSEEGTLYHAVYQILKVVKVPVYVVIVEAGATPADTVNAVIGGVDPTTGRKLGLAA ECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCEECHHH LGSVPEDLTIIGAPGFTGTKAVASEFASFGKRIKARVVLDGKDVSVADQVLYSQELGGAD HCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCC LGFDRCLVVHNMPAVYSKAAKKNVFLAPSSLAIAALAKVKQWESPGNQVTYAEDVSRVVE CCCCCEEEEECCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH YNILDTSTEGDLLNRYGVSYYARTILGGFSLLGNRSITGKFISYVGLEDAISRKLVKAGQ EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHH KAMAKNLTKSFMDQEVKRINDWLQTLVADETIPGGSVYLHPELNSVEKYKNGTWYVVIDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCEEEEEEC GRYAPNEHMVYQLNARDEIIEQFLEDVL CCCCCCCCEEEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA