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The map label for this gene is prtR [H]

Identifier: 77457362

GI number: 77457362

Start: 1313118

End: 1313930

Strand: Direct

Name: prtR [H]

Synonym: Pfl01_1135

Alternate gene names: 77457362

Gene position: 1313118-1313930 (Clockwise)

Preceding gene: 77457359

Following gene: 77457363

Centisome position: 20.4

GC content: 58.3

Gene sequence:

>813_bases
GTGCAAAAACGTCGACTATGCACGATTTATGCAAATCAGCATTTGTCTTCGCGAAAAACTTCAAGCACTATGCGCGTTAT
GCAAAAACGCAACGTATCTACCGTCTTAAGAGCACTGCTCGACCAGCACGGGATCTCCCCCACGGAGCTCCACCGTCGCA
CCGGCGTGCCTCAATCCACGCTCTCGCGAATTCTCAGCGGGAAGATCGTCGATCCTTCGGATAAACACATCTCGAAGATC
GCCGAGTACTTTGCCGTGAGCACCGATCAGTTGCGCGGGCGCGCGGACGTTGCGCCCGCCGCCAACGCCGGACGCGACGA
GTTGCATTCCGAACTCAAGGACATAAGCCTGTGGGACGACGACACCCCCGTCGATGACGACGAGGTGTCGGTGCCCTTTC
TTCGCGAGGTTGAATTGGCTGCTGGATCAGGAAGATTCGTCATCGAAGAGAGCGAGCGCTCGAGCCTGCGCTTCGGCAAG
CGCAGCCTGCGCCATAACGGTGTGCAGTTCGATCAGGCCAAATGCGTGACGGTACGGGGCAACAGCATGTTGCCGGTGCT
GCGCGACGGTGCCACGGTCGGGGTCAACGCGGGCAAGTGCGGGATCGGCGACATCATCGATGGCGACCTTTATGCGATCA
ACCACAACGGTCAATTGCGGGTGAAGCAGCTCTATCGCCTGCCTACCGGTATCCGTCTGCGCAGCTTCAATCGCGATGAA
CACCCGGACGAGGACTACAGCTTCCAGGATATGCAGGAAGAGCAGATCGTCATCCTCGGTCACGTCTTCTGGTGGGGCAT
GTACGCCCGATAA

Upstream 100 bases:

>100_bases
GGCAAAAGCGGGGCAGTCGCCGGGCTTTTCCGCGATGGGCGCAAGGTTACCATGGGCGGTCTGTCGGACGCAGGCATCGC
GGCCGGGTGACATCTATCTG

Downstream 100 bases:

>100_bases
CCTGATTCCTCTCTGACAAAACCCGCCTCGGCGGGTTTTTTTTCGCCTGTAGAAAACCGGGCAACCCTTGATTGGCGGGG
CTTCCATGCATCCGCGCATT

Product: phage repressor

Products: NA

Alternate protein names: Pyocin repressor protein [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MQKRRLCTIYANQHLSSRKTSSTMRVMQKRNVSTVLRALLDQHGISPTELHRRTGVPQSTLSRILSGKIVDPSDKHISKI
AEYFAVSTDQLRGRADVAPAANAGRDELHSELKDISLWDDDTPVDDDEVSVPFLREVELAAGSGRFVIEESERSSLRFGK
RSLRHNGVQFDQAKCVTVRGNSMLPVLRDGATVGVNAGKCGIGDIIDGDLYAINHNGQLRVKQLYRLPTGIRLRSFNRDE
HPDEDYSFQDMQEEQIVILGHVFWWGMYAR

Sequences:

>Translated_270_residues
MQKRRLCTIYANQHLSSRKTSSTMRVMQKRNVSTVLRALLDQHGISPTELHRRTGVPQSTLSRILSGKIVDPSDKHISKI
AEYFAVSTDQLRGRADVAPAANAGRDELHSELKDISLWDDDTPVDDDEVSVPFLREVELAAGSGRFVIEESERSSLRFGK
RSLRHNGVQFDQAKCVTVRGNSMLPVLRDGATVGVNAGKCGIGDIIDGDLYAINHNGQLRVKQLYRLPTGIRLRSFNRDE
HPDEDYSFQDMQEEQIVILGHVFWWGMYAR
>Mature_270_residues
MQKRRLCTIYANQHLSSRKTSSTMRVMQKRNVSTVLRALLDQHGISPTELHRRTGVPQSTLSRILSGKIVDPSDKHISKI
AEYFAVSTDQLRGRADVAPAANAGRDELHSELKDISLWDDDTPVDDDEVSVPFLREVELAAGSGRFVIEESERSSLRFGK
RSLRHNGVQFDQAKCVTVRGNSMLPVLRDGATVGVNAGKCGIGDIIDGDLYAINHNGQLRVKQLYRLPTGIRLRSFNRDE
HPDEDYSFQDMQEEQIVILGHVFWWGMYAR

Specific function: Represses the promoter activity of the prtN gene [H]

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF01381 HTH_3; PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 30431; Mature: 30431

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRRLCTIYANQHLSSRKTSSTMRVMQKRNVSTVLRALLDQHGISPTELHRRTGVPQST
CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHH
LSRILSGKIVDPSDKHISKIAEYFAVSTDQLRGRADVAPAANAGRDELHSELKDISLWDD
HHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
DTPVDDDEVSVPFLREVELAAGSGRFVIEESERSSLRFGKRSLRHNGVQFDQAKCVTVRG
CCCCCCCCCCCCHHHHEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCEECCEEEEEEEC
NSMLPVLRDGATVGVNAGKCGIGDIIDGDLYAINHNGQLRVKQLYRLPTGIRLRSFNRDE
CCCCCEEECCCEEECCCCCCCCCCCCCCCEEEECCCCCEEHHHHHHCCCCCEEECCCCCC
HPDEDYSFQDMQEEQIVILGHVFWWGMYAR
CCCCCCCCCCCCCCCEEEEEEHHHHHHCCC
>Mature Secondary Structure
MQKRRLCTIYANQHLSSRKTSSTMRVMQKRNVSTVLRALLDQHGISPTELHRRTGVPQST
CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHH
LSRILSGKIVDPSDKHISKIAEYFAVSTDQLRGRADVAPAANAGRDELHSELKDISLWDD
HHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
DTPVDDDEVSVPFLREVELAAGSGRFVIEESERSSLRFGKRSLRHNGVQFDQAKCVTVRG
CCCCCCCCCCCCHHHHEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCEECCEEEEEEEC
NSMLPVLRDGATVGVNAGKCGIGDIIDGDLYAINHNGQLRVKQLYRLPTGIRLRSFNRDE
CCCCCEEECCCEEECCCCCCCCCCCCCCCEEEECCCCCEEHHHHHHCCCCCEEECCCCCC
HPDEDYSFQDMQEEQIVILGHVFWWGMYAR
CCCCCCCCCCCCCCCEEEEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444788; 10984043 [H]