Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is yaeT [H]
Identifier: 77457336
GI number: 77457336
Start: 1282603
End: 1284993
Strand: Direct
Name: yaeT [H]
Synonym: Pfl01_1109
Alternate gene names: 77457336
Gene position: 1282603-1284993 (Clockwise)
Preceding gene: 77457335
Following gene: 77457337
Centisome position: 19.92
GC content: 57.26
Gene sequence:
>2391_bases ATGAAACGTCTGCTGCTAACTGCGGTTCTCACCGTATTGATGATCGCCGAAGTTCACGCCGAGTCCTTCACTATCTCTGA TATTCGCGTCAATGGCCTCCAGCGGGTCTCCGCGGGTAGCGTCTTTGGTGCCTTGCCGTTGAACGTCGGCGAGCAGGCGG ATGATCGTCGCTTGGTGGAATCCACTCGTGCGTTGTTCAAAACCGGTTTCTTTCAAGATATCCAGCTGGGCCGCGAAGGC AACGTTCTGGTGATCACTGTCGTCGAACGTCCCTCGGTCGCCAGCATCGAGATCGAAGGCAACAAGGCGATCTCTACCGA AGACCTGATGAAAGGCCTCAAGCAATCCGGTCTGGCCGAAGGCGAGATCTTCCAGCGCGCGACCCTTGAAGGCGTGCGTA ACGAGCTGCAACGTCAGTACGTTGCACAAGGTCGTTACTCGGCTACCGTCGATACCGAAGTGGTCTCGCAGCCGCGCAAC CGTGTCGGCCTGAAAGTGAAGATCAACGAAGGCACCGTCGCTGCCATTCAGCATATCAACGTGGTGGGCAACACGGTTTT CCCCGAGGAAGACCTGACCGACCTGTTCGAACTGAAAACCACCAACTGGCTGTCGTTCTTCAAGAACGACGACAAGTACG CCCGTGAAAAACTGTCCGGTGACCTGGAGCGTCTGCGTTCCTACTACCTGGACCGCGGCTATATCAACATGGATATCGCT TCGACCCAGGTGTCCATCACCCCGGACAAGAAGCACGTCTACATCACTGTCAACGTCAACGAAGGCGAGAAGTACACCGT TCGTGACGTCAAGCTCAGCGGTGACCTGAAGGTTCCTGAAGATCAGGTCAAGTCCCTGTTGCTGGTGCAGAAAGGCCAGG TGTTCTCGCGCAAGCTGATGACCACCACTTCCGAACTGATCACCCGGCGTCTGGGTAACGAGGGTTACACCTTCGCCAAC GTTAACGGCGTGCCACAACCGCATGACGAAGATCACACCGTCGATATCCTGTTTGCCGTCGATCCGGGCAAGCGTGCCTA CGTCAACCGCATCAACTTCCGTGGCAACACCAAGTCCGAGGACGAAGTGCTGCGCCGTGAAATGCGTCAGATGGAAGGTG GCTGGGCTTCTACTTACCTGATCGATCAGTCCAAGACCCGTCTGGAGCGTCTGGGCTTCTTTAAAGAGGTCAACGTCGAA ACCCCGGCCGTGCCAGGTGTCGACGACCAGGTTGACGTGAACTACAGCGTGGAAGAGCAGGCCTCCGGTTCGATCACCGC CAGCGTCGGTTTCGCCCAAAGTGCCGGTCTGATCCTCGGTGGTTCGATCACCCAGAACAACTTCCTCGGTACCGGTAACC GCGTCAGCGTCGGCCTGACCCGCAGCGAATACCAGAGCCGCTACAACTTTGGCTACGTTGACCCCTACTGGACCGCCGAT GGCGTGAGCCTGGGTTACAACGCGTTCTACCGCACCACCGACTACAAAGACCTTGACGTCGACGTAGCTAGCTACGCGGT AGACAGCCTGGGCGCCGGCGTGAACGTGGGCTACCCGATCAGCGAGACTTCGCGTCTGACCTTTGGTCTGTCCGCTCAAC AGGACAAGATCAAGACCGGTCAATACACCGTTGACGAGATTTTCGACTTCGTTAAGCGTGAAGGCGACAACTACCTGAAC TTCAAGGCTTCGGCCGGCTGGTCCGAATCCACCCTGAACAAGGGTGTATTGCCAACCCGTGGTCGTTCCCAGAGCCTGAC CCTGGAAACCACGATTCCAGGCAGCGACCTGTCGTTCTTCAAGCTCGATTACCGTGGCCAGTTGTTCCAGCCACTGAGCG AAAACTACACCATGCGCCTGCACACCGAGCTGGGTTATGGCGACGGTTACGGTTCGACCGATGGCTTGCCGTTCTATGAA AACTACTATGCTGGTGGTTTCAACTCGGTACGTGGCTTCAAGGACAGCACCCTGGGTCCGCGCAGTACCCCTAGCCGTGG TGCGGATGTGACCGGTAACGCTGGTACGTTGCGTGACCCGGATCAGGATCCGCTGCCGTTCGGTGGTAACGTGTTGATCC AGGGTGGTGTCGAGGTGTTGTTCCCGCTGCCATTCGTCAAGGATCAGCGTTCCCTGCGTACTTCGGTATTCTGGGATGTG GGTAACGTATTCGACTCCAAGTGCGAGAAGACCACCAACGCGACTGTCGGCTCGACTTCTGCCACCCAATGCAACGACAT CAGCCTCAGCAACATGGCCAGCTCCGTCGGTGTCGGTGTGACCTGGGTCACTGCGCTGGGCCCGCTGAGCTTTGCACTGG CGATGCCGATCAAGAAACCGGATGACGCTGAAACTCAAGTGTTCCAATTCTCCCTCGGCCAGACGTTCTAA
Upstream 100 bases:
>100_bases TGGTCAACGATCTGGGTCGTCTGTAACGCTTCGCTGAATTGCGAATCTGCCGCATTTTGCGGCAGTTTGTTTATTGCCAG TTGGAATAAGAAAGGACTTC
Downstream 100 bases:
>100_bases GCGTCTGACCCAAGACAACGACAATGGATTTTGTAGGAGTGCATCGTGCGTAAGTTGACTCAATTGGTTCTCCTGGCCTC CGTACTGGTGGCAGGCCCGG
Product: surface antigen (D15)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 796; Mature: 796
Protein sequence:
>796_residues MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVESTRALFKTGFFQDIQLGREG NVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVSQPRN RVGLKVKINEGTVAAIQHINVVGNTVFPEEDLTDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA STQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKLMTTTSELITRRLGNEGYTFAN VNGVPQPHDEDHTVDILFAVDPGKRAYVNRINFRGNTKSEDEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVE TPAVPGVDDQVDVNYSVEEQASGSITASVGFAQSAGLILGGSITQNNFLGTGNRVSVGLTRSEYQSRYNFGYVDPYWTAD GVSLGYNAFYRTTDYKDLDVDVASYAVDSLGAGVNVGYPISETSRLTFGLSAQQDKIKTGQYTVDEIFDFVKREGDNYLN FKASAGWSESTLNKGVLPTRGRSQSLTLETTIPGSDLSFFKLDYRGQLFQPLSENYTMRLHTELGYGDGYGSTDGLPFYE NYYAGGFNSVRGFKDSTLGPRSTPSRGADVTGNAGTLRDPDQDPLPFGGNVLIQGGVEVLFPLPFVKDQRSLRTSVFWDV GNVFDSKCEKTTNATVGSTSATQCNDISLSNMASSVGVGVTWVTALGPLSFALAMPIKKPDDAETQVFQFSLGQTF
Sequences:
>Translated_796_residues MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVESTRALFKTGFFQDIQLGREG NVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVSQPRN RVGLKVKINEGTVAAIQHINVVGNTVFPEEDLTDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA STQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKLMTTTSELITRRLGNEGYTFAN VNGVPQPHDEDHTVDILFAVDPGKRAYVNRINFRGNTKSEDEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVE TPAVPGVDDQVDVNYSVEEQASGSITASVGFAQSAGLILGGSITQNNFLGTGNRVSVGLTRSEYQSRYNFGYVDPYWTAD GVSLGYNAFYRTTDYKDLDVDVASYAVDSLGAGVNVGYPISETSRLTFGLSAQQDKIKTGQYTVDEIFDFVKREGDNYLN FKASAGWSESTLNKGVLPTRGRSQSLTLETTIPGSDLSFFKLDYRGQLFQPLSENYTMRLHTELGYGDGYGSTDGLPFYE NYYAGGFNSVRGFKDSTLGPRSTPSRGADVTGNAGTLRDPDQDPLPFGGNVLIQGGVEVLFPLPFVKDQRSLRTSVFWDV GNVFDSKCEKTTNATVGSTSATQCNDISLSNMASSVGVGVTWVTALGPLSFALAMPIKKPDDAETQVFQFSLGQTF >Mature_796_residues MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVESTRALFKTGFFQDIQLGREG NVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVSQPRN RVGLKVKINEGTVAAIQHINVVGNTVFPEEDLTDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA STQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKLMTTTSELITRRLGNEGYTFAN VNGVPQPHDEDHTVDILFAVDPGKRAYVNRINFRGNTKSEDEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVE TPAVPGVDDQVDVNYSVEEQASGSITASVGFAQSAGLILGGSITQNNFLGTGNRVSVGLTRSEYQSRYNFGYVDPYWTAD GVSLGYNAFYRTTDYKDLDVDVASYAVDSLGAGVNVGYPISETSRLTFGLSAQQDKIKTGQYTVDEIFDFVKREGDNYLN FKASAGWSESTLNKGVLPTRGRSQSLTLETTIPGSDLSFFKLDYRGQLFQPLSENYTMRLHTELGYGDGYGSTDGLPFYE NYYAGGFNSVRGFKDSTLGPRSTPSRGADVTGNAGTLRDPDQDPLPFGGNVLIQGGVEVLFPLPFVKDQRSLRTSVFWDV GNVFDSKCEKTTNATVGSTSATQCNDISLSNMASSVGVGVTWVTALGPLSFALAMPIKKPDDAETQVFQFSLGQTF
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=822, Percent_Identity=37.5912408759124, Blast_Score=552, Evalue=1e-158,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 87757; Mature: 87757
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVE CCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEECCCCEEEEECCCCCCCCCHHHHHH STRALFKTGFFQDIQLGREGNVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAE HHHHHHHHCCHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCC GEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVSQPRNRVGLKVKINEGTVAAIQHIN CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHCCHHHCCEEEEECCCCEEEEEEEH VVGNTVFPEEDLTDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA HHCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE STQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKLM CEEEEECCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH TTTSELITRRLGNEGYTFANVNGVPQPHDEDHTVDILFAVDPGKRAYVNRINFRGNTKSE HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCH DEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPAVPGVDDQVDVNYSVEEQ HHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCEECCCCCCCCCCCCCCEECCCCCCCC ASGSITASVGFAQSAGLILGGSITQNNFLGTGNRVSVGLTRSEYQSRYNFGYVDPYWTAD CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCC GVSLGYNAFYRTTDYKDLDVDVASYAVDSLGAGVNVGYPISETSRLTFGLSAQQDKIKTG CCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCC QYTVDEIFDFVKREGDNYLNFKASAGWSESTLNKGVLPTRGRSQSLTLETTIPGSDLSFF CEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEE KLDYRGQLFQPLSENYTMRLHTELGYGDGYGSTDGLPFYENYYAGGFNSVRGFKDSTLGP EEECCCCHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC RSTPSRGADVTGNAGTLRDPDQDPLPFGGNVLIQGGVEVLFPLPFVKDQRSLRTSVFWDV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHH GNVFDSKCEKTTNATVGSTSATQCNDISLSNMASSVGVGVTWVTALGPLSFALAMPIKKP HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHEECCCCCC DDAETQVFQFSLGQTF CCCCCEEEEEECCCCC >Mature Secondary Structure MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVE CCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEECCCCEEEEECCCCCCCCCHHHHHH STRALFKTGFFQDIQLGREGNVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAE HHHHHHHHCCHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCC GEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVSQPRNRVGLKVKINEGTVAAIQHIN CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHCCHHHCCEEEEECCCCEEEEEEEH VVGNTVFPEEDLTDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA HHCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE STQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKLM CEEEEECCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH TTTSELITRRLGNEGYTFANVNGVPQPHDEDHTVDILFAVDPGKRAYVNRINFRGNTKSE HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCH DEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPAVPGVDDQVDVNYSVEEQ HHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCEECCCCCCCCCCCCCCEECCCCCCCC ASGSITASVGFAQSAGLILGGSITQNNFLGTGNRVSVGLTRSEYQSRYNFGYVDPYWTAD CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCC GVSLGYNAFYRTTDYKDLDVDVASYAVDSLGAGVNVGYPISETSRLTFGLSAQQDKIKTG CCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCC QYTVDEIFDFVKREGDNYLNFKASAGWSESTLNKGVLPTRGRSQSLTLETTIPGSDLSFF CEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEE KLDYRGQLFQPLSENYTMRLHTELGYGDGYGSTDGLPFYENYYAGGFNSVRGFKDSTLGP EEECCCCHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC RSTPSRGADVTGNAGTLRDPDQDPLPFGGNVLIQGGVEVLFPLPFVKDQRSLRTSVFWDV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHH GNVFDSKCEKTTNATVGSTSATQCNDISLSNMASSVGVGVTWVTALGPLSFALAMPIKKP HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHEECCCCCC DDAETQVFQFSLGQTF CCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA