Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yaeT [H]

Identifier: 77457336

GI number: 77457336

Start: 1282603

End: 1284993

Strand: Direct

Name: yaeT [H]

Synonym: Pfl01_1109

Alternate gene names: 77457336

Gene position: 1282603-1284993 (Clockwise)

Preceding gene: 77457335

Following gene: 77457337

Centisome position: 19.92

GC content: 57.26

Gene sequence:

>2391_bases
ATGAAACGTCTGCTGCTAACTGCGGTTCTCACCGTATTGATGATCGCCGAAGTTCACGCCGAGTCCTTCACTATCTCTGA
TATTCGCGTCAATGGCCTCCAGCGGGTCTCCGCGGGTAGCGTCTTTGGTGCCTTGCCGTTGAACGTCGGCGAGCAGGCGG
ATGATCGTCGCTTGGTGGAATCCACTCGTGCGTTGTTCAAAACCGGTTTCTTTCAAGATATCCAGCTGGGCCGCGAAGGC
AACGTTCTGGTGATCACTGTCGTCGAACGTCCCTCGGTCGCCAGCATCGAGATCGAAGGCAACAAGGCGATCTCTACCGA
AGACCTGATGAAAGGCCTCAAGCAATCCGGTCTGGCCGAAGGCGAGATCTTCCAGCGCGCGACCCTTGAAGGCGTGCGTA
ACGAGCTGCAACGTCAGTACGTTGCACAAGGTCGTTACTCGGCTACCGTCGATACCGAAGTGGTCTCGCAGCCGCGCAAC
CGTGTCGGCCTGAAAGTGAAGATCAACGAAGGCACCGTCGCTGCCATTCAGCATATCAACGTGGTGGGCAACACGGTTTT
CCCCGAGGAAGACCTGACCGACCTGTTCGAACTGAAAACCACCAACTGGCTGTCGTTCTTCAAGAACGACGACAAGTACG
CCCGTGAAAAACTGTCCGGTGACCTGGAGCGTCTGCGTTCCTACTACCTGGACCGCGGCTATATCAACATGGATATCGCT
TCGACCCAGGTGTCCATCACCCCGGACAAGAAGCACGTCTACATCACTGTCAACGTCAACGAAGGCGAGAAGTACACCGT
TCGTGACGTCAAGCTCAGCGGTGACCTGAAGGTTCCTGAAGATCAGGTCAAGTCCCTGTTGCTGGTGCAGAAAGGCCAGG
TGTTCTCGCGCAAGCTGATGACCACCACTTCCGAACTGATCACCCGGCGTCTGGGTAACGAGGGTTACACCTTCGCCAAC
GTTAACGGCGTGCCACAACCGCATGACGAAGATCACACCGTCGATATCCTGTTTGCCGTCGATCCGGGCAAGCGTGCCTA
CGTCAACCGCATCAACTTCCGTGGCAACACCAAGTCCGAGGACGAAGTGCTGCGCCGTGAAATGCGTCAGATGGAAGGTG
GCTGGGCTTCTACTTACCTGATCGATCAGTCCAAGACCCGTCTGGAGCGTCTGGGCTTCTTTAAAGAGGTCAACGTCGAA
ACCCCGGCCGTGCCAGGTGTCGACGACCAGGTTGACGTGAACTACAGCGTGGAAGAGCAGGCCTCCGGTTCGATCACCGC
CAGCGTCGGTTTCGCCCAAAGTGCCGGTCTGATCCTCGGTGGTTCGATCACCCAGAACAACTTCCTCGGTACCGGTAACC
GCGTCAGCGTCGGCCTGACCCGCAGCGAATACCAGAGCCGCTACAACTTTGGCTACGTTGACCCCTACTGGACCGCCGAT
GGCGTGAGCCTGGGTTACAACGCGTTCTACCGCACCACCGACTACAAAGACCTTGACGTCGACGTAGCTAGCTACGCGGT
AGACAGCCTGGGCGCCGGCGTGAACGTGGGCTACCCGATCAGCGAGACTTCGCGTCTGACCTTTGGTCTGTCCGCTCAAC
AGGACAAGATCAAGACCGGTCAATACACCGTTGACGAGATTTTCGACTTCGTTAAGCGTGAAGGCGACAACTACCTGAAC
TTCAAGGCTTCGGCCGGCTGGTCCGAATCCACCCTGAACAAGGGTGTATTGCCAACCCGTGGTCGTTCCCAGAGCCTGAC
CCTGGAAACCACGATTCCAGGCAGCGACCTGTCGTTCTTCAAGCTCGATTACCGTGGCCAGTTGTTCCAGCCACTGAGCG
AAAACTACACCATGCGCCTGCACACCGAGCTGGGTTATGGCGACGGTTACGGTTCGACCGATGGCTTGCCGTTCTATGAA
AACTACTATGCTGGTGGTTTCAACTCGGTACGTGGCTTCAAGGACAGCACCCTGGGTCCGCGCAGTACCCCTAGCCGTGG
TGCGGATGTGACCGGTAACGCTGGTACGTTGCGTGACCCGGATCAGGATCCGCTGCCGTTCGGTGGTAACGTGTTGATCC
AGGGTGGTGTCGAGGTGTTGTTCCCGCTGCCATTCGTCAAGGATCAGCGTTCCCTGCGTACTTCGGTATTCTGGGATGTG
GGTAACGTATTCGACTCCAAGTGCGAGAAGACCACCAACGCGACTGTCGGCTCGACTTCTGCCACCCAATGCAACGACAT
CAGCCTCAGCAACATGGCCAGCTCCGTCGGTGTCGGTGTGACCTGGGTCACTGCGCTGGGCCCGCTGAGCTTTGCACTGG
CGATGCCGATCAAGAAACCGGATGACGCTGAAACTCAAGTGTTCCAATTCTCCCTCGGCCAGACGTTCTAA

Upstream 100 bases:

>100_bases
TGGTCAACGATCTGGGTCGTCTGTAACGCTTCGCTGAATTGCGAATCTGCCGCATTTTGCGGCAGTTTGTTTATTGCCAG
TTGGAATAAGAAAGGACTTC

Downstream 100 bases:

>100_bases
GCGTCTGACCCAAGACAACGACAATGGATTTTGTAGGAGTGCATCGTGCGTAAGTTGACTCAATTGGTTCTCCTGGCCTC
CGTACTGGTGGCAGGCCCGG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 796; Mature: 796

Protein sequence:

>796_residues
MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVESTRALFKTGFFQDIQLGREG
NVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVSQPRN
RVGLKVKINEGTVAAIQHINVVGNTVFPEEDLTDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
STQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKLMTTTSELITRRLGNEGYTFAN
VNGVPQPHDEDHTVDILFAVDPGKRAYVNRINFRGNTKSEDEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVE
TPAVPGVDDQVDVNYSVEEQASGSITASVGFAQSAGLILGGSITQNNFLGTGNRVSVGLTRSEYQSRYNFGYVDPYWTAD
GVSLGYNAFYRTTDYKDLDVDVASYAVDSLGAGVNVGYPISETSRLTFGLSAQQDKIKTGQYTVDEIFDFVKREGDNYLN
FKASAGWSESTLNKGVLPTRGRSQSLTLETTIPGSDLSFFKLDYRGQLFQPLSENYTMRLHTELGYGDGYGSTDGLPFYE
NYYAGGFNSVRGFKDSTLGPRSTPSRGADVTGNAGTLRDPDQDPLPFGGNVLIQGGVEVLFPLPFVKDQRSLRTSVFWDV
GNVFDSKCEKTTNATVGSTSATQCNDISLSNMASSVGVGVTWVTALGPLSFALAMPIKKPDDAETQVFQFSLGQTF

Sequences:

>Translated_796_residues
MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVESTRALFKTGFFQDIQLGREG
NVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVSQPRN
RVGLKVKINEGTVAAIQHINVVGNTVFPEEDLTDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
STQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKLMTTTSELITRRLGNEGYTFAN
VNGVPQPHDEDHTVDILFAVDPGKRAYVNRINFRGNTKSEDEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVE
TPAVPGVDDQVDVNYSVEEQASGSITASVGFAQSAGLILGGSITQNNFLGTGNRVSVGLTRSEYQSRYNFGYVDPYWTAD
GVSLGYNAFYRTTDYKDLDVDVASYAVDSLGAGVNVGYPISETSRLTFGLSAQQDKIKTGQYTVDEIFDFVKREGDNYLN
FKASAGWSESTLNKGVLPTRGRSQSLTLETTIPGSDLSFFKLDYRGQLFQPLSENYTMRLHTELGYGDGYGSTDGLPFYE
NYYAGGFNSVRGFKDSTLGPRSTPSRGADVTGNAGTLRDPDQDPLPFGGNVLIQGGVEVLFPLPFVKDQRSLRTSVFWDV
GNVFDSKCEKTTNATVGSTSATQCNDISLSNMASSVGVGVTWVTALGPLSFALAMPIKKPDDAETQVFQFSLGQTF
>Mature_796_residues
MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVESTRALFKTGFFQDIQLGREG
NVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVSQPRN
RVGLKVKINEGTVAAIQHINVVGNTVFPEEDLTDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
STQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKLMTTTSELITRRLGNEGYTFAN
VNGVPQPHDEDHTVDILFAVDPGKRAYVNRINFRGNTKSEDEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVE
TPAVPGVDDQVDVNYSVEEQASGSITASVGFAQSAGLILGGSITQNNFLGTGNRVSVGLTRSEYQSRYNFGYVDPYWTAD
GVSLGYNAFYRTTDYKDLDVDVASYAVDSLGAGVNVGYPISETSRLTFGLSAQQDKIKTGQYTVDEIFDFVKREGDNYLN
FKASAGWSESTLNKGVLPTRGRSQSLTLETTIPGSDLSFFKLDYRGQLFQPLSENYTMRLHTELGYGDGYGSTDGLPFYE
NYYAGGFNSVRGFKDSTLGPRSTPSRGADVTGNAGTLRDPDQDPLPFGGNVLIQGGVEVLFPLPFVKDQRSLRTSVFWDV
GNVFDSKCEKTTNATVGSTSATQCNDISLSNMASSVGVGVTWVTALGPLSFALAMPIKKPDDAETQVFQFSLGQTF

Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=822, Percent_Identity=37.5912408759124, Blast_Score=552, Evalue=1e-158,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 87757; Mature: 87757

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVE
CCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEECCCCEEEEECCCCCCCCCHHHHHH
STRALFKTGFFQDIQLGREGNVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAE
HHHHHHHHCCHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCC
GEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVSQPRNRVGLKVKINEGTVAAIQHIN
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHCCHHHCCEEEEECCCCEEEEEEEH
VVGNTVFPEEDLTDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
HHCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
STQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKLM
CEEEEECCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH
TTTSELITRRLGNEGYTFANVNGVPQPHDEDHTVDILFAVDPGKRAYVNRINFRGNTKSE
HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCH
DEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPAVPGVDDQVDVNYSVEEQ
HHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCEECCCCCCCCCCCCCCEECCCCCCCC
ASGSITASVGFAQSAGLILGGSITQNNFLGTGNRVSVGLTRSEYQSRYNFGYVDPYWTAD
CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCC
GVSLGYNAFYRTTDYKDLDVDVASYAVDSLGAGVNVGYPISETSRLTFGLSAQQDKIKTG
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
QYTVDEIFDFVKREGDNYLNFKASAGWSESTLNKGVLPTRGRSQSLTLETTIPGSDLSFF
CEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEE
KLDYRGQLFQPLSENYTMRLHTELGYGDGYGSTDGLPFYENYYAGGFNSVRGFKDSTLGP
EEECCCCHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
RSTPSRGADVTGNAGTLRDPDQDPLPFGGNVLIQGGVEVLFPLPFVKDQRSLRTSVFWDV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHH
GNVFDSKCEKTTNATVGSTSATQCNDISLSNMASSVGVGVTWVTALGPLSFALAMPIKKP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHEECCCCCC
DDAETQVFQFSLGQTF
CCCCCEEEEEECCCCC
>Mature Secondary Structure
MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVE
CCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEECCCCEEEEECCCCCCCCCHHHHHH
STRALFKTGFFQDIQLGREGNVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAE
HHHHHHHHCCHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCC
GEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVSQPRNRVGLKVKINEGTVAAIQHIN
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHCCHHHCCEEEEECCCCEEEEEEEH
VVGNTVFPEEDLTDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
HHCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
STQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKLM
CEEEEECCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH
TTTSELITRRLGNEGYTFANVNGVPQPHDEDHTVDILFAVDPGKRAYVNRINFRGNTKSE
HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCH
DEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPAVPGVDDQVDVNYSVEEQ
HHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCEECCCCCCCCCCCCCCEECCCCCCCC
ASGSITASVGFAQSAGLILGGSITQNNFLGTGNRVSVGLTRSEYQSRYNFGYVDPYWTAD
CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCC
GVSLGYNAFYRTTDYKDLDVDVASYAVDSLGAGVNVGYPISETSRLTFGLSAQQDKIKTG
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
QYTVDEIFDFVKREGDNYLNFKASAGWSESTLNKGVLPTRGRSQSLTLETTIPGSDLSFF
CEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEE
KLDYRGQLFQPLSENYTMRLHTELGYGDGYGSTDGLPFYENYYAGGFNSVRGFKDSTLGP
EEECCCCHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
RSTPSRGADVTGNAGTLRDPDQDPLPFGGNVLIQGGVEVLFPLPFVKDQRSLRTSVFWDV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHH
GNVFDSKCEKTTNATVGSTSATQCNDISLSNMASSVGVGVTWVTALGPLSFALAMPIKKP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHEECCCCCC
DDAETQVFQFSLGQTF
CCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA