Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457308
Identifier: 77457308
GI number: 77457308
Start: 1251378
End: 1252772
Strand: Direct
Name: 77457308
Synonym: Pfl01_1081
Alternate gene names: NA
Gene position: 1251378-1252772 (Clockwise)
Preceding gene: 77457307
Following gene: 77457312
Centisome position: 19.44
GC content: 57.42
Gene sequence:
>1395_bases ATGAAGAAACCGCCGGTATTGAAAGGTCGGGCCGATCCGGTCTTTGAGTTGTTGATGCGCGCGCCTCACAAGCAGCGTCT GGCGGACTATCTTGCGTTGCTCAAGCCGCTGGATGATCACGGGCGGTATCTGCCTTTTGAGGATTTGCGGTATCGCTGGG CCAGCGGGCTGGATTCGCGTTTGTGTTGGGCGTTGGTCAAGAAGGCGCGGGCCGCTCAGTACATTCATCTTCTGCCTTTG GGGGAGCCGGCCCAGTGGGGGAAGTTTGTGCCGACGCCAACCGCGCAGAAGGCCCTTTCAGTGGTTGATCGGCAAACCAC GACGGCGTCGCTGGAGTACATGACCAGCCAGATAGGCGAGCGGGCGCATTTCAGTTATTTGCTTAACGATTTGATCGAGG ATGAGGCGATCAGCAGCAGTCAGCTGGAAGGCGCCGCGACCACTACCCGTGTTGCCAAGGACATGCTCAAGCAACGGCGC CAGCCCCGGACGCCGGATGAGCGGATGGTCATGGGTAATTTCCGGATGATGAATTTCGCTTGGGAAAAGCGTTACGAGCC TTTGAGCGTGGAGTTGATTGCGTCGATGCATCGGGTCGGTGTCGAGGGTATTGATGACGAGCAGTACGACCCCGGGCTTT TCAGGACCAACGATGAAGTGGTGGTGCAGGACGGCGAAGGGAATACCGTCCACTCGCCACCGCCTGCCGCCGGATTAGTG AGGCGACTGGATTTGCTCTCGCAGTGGATCAATCAACCACAGGGTTCACCTCGGCAAAAAAACTACCTGCATCCGCTGAT CAAGGCGATCACGCTGCACTTTGCCCTGGGCTATGAACATCCCTTTCGCGATGGCAACGGGCGGGTCGCCAGGGCGCTGT TTTACTGGCTCATGTTCAAGCACGAGTTTTCGGCATTCCGCTATATCGCGATCAGTCTTTTACTGCGCAACGCGCCGGTA AAGTACGGGCGGTCGTATTTGCACAGCGAAGCTGATGAGCTCGACCTGACGTACTTCATCGAGTTTCAGTGTTCGGTGAT TTTGCGGGCGGTGGAGGGTTTTACCGACGCGTACCGCAAGCGTGTGGCGTACAGCGAAGGCTTCGAGCGCTGGCTGACCT GTTCGGGCTTTTTTGATCGGCTGACAGAGCGGCAGCGGGCGATTTATCAGGTGGCCAGGAGCGGGGTGGCGAAGGAGTTC ACGGCGGGGAACGTCAAGGAGCATCTTGGTTGTGCCTACAACACAGCGGTGTTGACGTTGAGCGGGTTGGTTGAGCTGCA GGTTTTCGAGAAGAAGAAAATGGGACGCGAGTGGGTGTACTTTTTACGTGTGTCTGCTGGCGACGGATTGAACAACGGGA GTGAGAAAACTCACTCCCGTGTGGTGCCGGTTTAG
Upstream 100 bases:
>100_bases TGTCGTCTCCTACGTTTTTTTCAGACGCCTCCGATATTGAGTCGCTGTGTTGGCGGTGCTGTACTCGAGGCTGTTTTTCA GCCTTGGTTGAGCAGCGTTG
Downstream 100 bases:
>100_bases AGCGTACCGAACACTTTCTTCGCCAGACTCGTCGCCGCAGCGGCCGGGTTCTTGCGGATGGTTTCTTCCTGTTTGCCGAT CATTTCGAACAGGCCGTTGA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Xin-Antitoxin System Toxin Component Fic Family; Filamentation Induced By Camp Protein Fic; Regulatory Protein
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MKKPPVLKGRADPVFELLMRAPHKQRLADYLALLKPLDDHGRYLPFEDLRYRWASGLDSRLCWALVKKARAAQYIHLLPL GEPAQWGKFVPTPTAQKALSVVDRQTTTASLEYMTSQIGERAHFSYLLNDLIEDEAISSSQLEGAATTTRVAKDMLKQRR QPRTPDERMVMGNFRMMNFAWEKRYEPLSVELIASMHRVGVEGIDDEQYDPGLFRTNDEVVVQDGEGNTVHSPPPAAGLV RRLDLLSQWINQPQGSPRQKNYLHPLIKAITLHFALGYEHPFRDGNGRVARALFYWLMFKHEFSAFRYIAISLLLRNAPV KYGRSYLHSEADELDLTYFIEFQCSVILRAVEGFTDAYRKRVAYSEGFERWLTCSGFFDRLTERQRAIYQVARSGVAKEF TAGNVKEHLGCAYNTAVLTLSGLVELQVFEKKKMGREWVYFLRVSAGDGLNNGSEKTHSRVVPV
Sequences:
>Translated_464_residues MKKPPVLKGRADPVFELLMRAPHKQRLADYLALLKPLDDHGRYLPFEDLRYRWASGLDSRLCWALVKKARAAQYIHLLPL GEPAQWGKFVPTPTAQKALSVVDRQTTTASLEYMTSQIGERAHFSYLLNDLIEDEAISSSQLEGAATTTRVAKDMLKQRR QPRTPDERMVMGNFRMMNFAWEKRYEPLSVELIASMHRVGVEGIDDEQYDPGLFRTNDEVVVQDGEGNTVHSPPPAAGLV RRLDLLSQWINQPQGSPRQKNYLHPLIKAITLHFALGYEHPFRDGNGRVARALFYWLMFKHEFSAFRYIAISLLLRNAPV KYGRSYLHSEADELDLTYFIEFQCSVILRAVEGFTDAYRKRVAYSEGFERWLTCSGFFDRLTERQRAIYQVARSGVAKEF TAGNVKEHLGCAYNTAVLTLSGLVELQVFEKKKMGREWVYFLRVSAGDGLNNGSEKTHSRVVPV >Mature_464_residues MKKPPVLKGRADPVFELLMRAPHKQRLADYLALLKPLDDHGRYLPFEDLRYRWASGLDSRLCWALVKKARAAQYIHLLPL GEPAQWGKFVPTPTAQKALSVVDRQTTTASLEYMTSQIGERAHFSYLLNDLIEDEAISSSQLEGAATTTRVAKDMLKQRR QPRTPDERMVMGNFRMMNFAWEKRYEPLSVELIASMHRVGVEGIDDEQYDPGLFRTNDEVVVQDGEGNTVHSPPPAAGLV RRLDLLSQWINQPQGSPRQKNYLHPLIKAITLHFALGYEHPFRDGNGRVARALFYWLMFKHEFSAFRYIAISLLLRNAPV KYGRSYLHSEADELDLTYFIEFQCSVILRAVEGFTDAYRKRVAYSEGFERWLTCSGFFDRLTERQRAIYQVARSGVAKEF TAGNVKEHLGCAYNTAVLTLSGLVELQVFEKKKMGREWVYFLRVSAGDGLNNGSEKTHSRVVPV
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53071; Mature: 53071
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPPVLKGRADPVFELLMRAPHKQRLADYLALLKPLDDHGRYLPFEDLRYRWASGLDSR CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHH LCWALVKKARAAQYIHLLPLGEPAQWGKFVPTPTAQKALSVVDRQTTTASLEYMTSQIGE HHHHHHHHHHHHCEEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAHFSYLLNDLIEDEAISSSQLEGAATTTRVAKDMLKQRRQPRTPDERMVMGNFRMMNFA HHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHEEECCHHEEHHH WEKRYEPLSVELIASMHRVGVEGIDDEQYDPGLFRTNDEVVVQDGEGNTVHSPPPAAGLV HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCHHHHH RRLDLLSQWINQPQGSPRQKNYLHPLIKAITLHFALGYEHPFRDGNGRVARALFYWLMFK HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH HEFSAFRYIAISLLLRNAPVKYGRSYLHSEADELDLTYFIEFQCSVILRAVEGFTDAYRK HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH RVAYSEGFERWLTCSGFFDRLTERQRAIYQVARSGVAKEFTAGNVKEHLGCAYNTAVLTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCCHHHHHHHHH SGLVELQVFEKKKMGREWVYFLRVSAGDGLNNGSEKTHSRVVPV HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MKKPPVLKGRADPVFELLMRAPHKQRLADYLALLKPLDDHGRYLPFEDLRYRWASGLDSR CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHH LCWALVKKARAAQYIHLLPLGEPAQWGKFVPTPTAQKALSVVDRQTTTASLEYMTSQIGE HHHHHHHHHHHHCEEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAHFSYLLNDLIEDEAISSSQLEGAATTTRVAKDMLKQRRQPRTPDERMVMGNFRMMNFA HHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHEEECCHHEEHHH WEKRYEPLSVELIASMHRVGVEGIDDEQYDPGLFRTNDEVVVQDGEGNTVHSPPPAAGLV HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCHHHHH RRLDLLSQWINQPQGSPRQKNYLHPLIKAITLHFALGYEHPFRDGNGRVARALFYWLMFK HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH HEFSAFRYIAISLLLRNAPVKYGRSYLHSEADELDLTYFIEFQCSVILRAVEGFTDAYRK HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH RVAYSEGFERWLTCSGFFDRLTERQRAIYQVARSGVAKEFTAGNVKEHLGCAYNTAVLTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCCHHHHHHHHH SGLVELQVFEKKKMGREWVYFLRVSAGDGLNNGSEKTHSRVVPV HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA