| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is frzE [H]
Identifier: 77457283
GI number: 77457283
Start: 1223280
End: 1225574
Strand: Direct
Name: frzE [H]
Synonym: Pfl01_1056
Alternate gene names: 77457283
Gene position: 1223280-1225574 (Clockwise)
Preceding gene: 77457282
Following gene: 77457284
Centisome position: 19.0
GC content: 65.05
Gene sequence:
>2295_bases ATGACCCCCGAGCAAATGCGCGACGCCTCCTTGCTCGAGCTGTTCAGCCTCGAAGCCGAAGCCCAGACCCAGGTGCTCAG CGCCGGGCTGCTGGCGCTGGAGCGCAATCCGACCCAGGCCGATCAGCTCGAATCGTGCATGCGCGCGGCGCACTCGTTGA AAGGCGCGGCGCGGATCGTCGGCATCGACAGCGGCGTCAGCGTCGCCCACGTGATGGAAGATTGCCTGGTCAGTGCGCAG GAGGGGCGGTTGTTCCTGCGTCCGGAGCATATCGACGCGTTGTTGCAGGGCACCGATTTGCTGATGCGCATCGCCACCCC GGCCAACGGCCCGCAACCGGCGGACATCGAGGCTTATGTGGCGTTGATGGGCGGTTTGCTCGACCCGGCGGCACCGGCCG TGGTGCCCGCCGCTCAGAGCGCACCGCCGATGGCCGAGTTTCAGCTTCAGCCACTGCCGGTGGTTGAGCCAGCGCCGGTT GAAGTCTCGGTCGAGGTGACCGAGCCGGAGCCCGCGCCGCGCAAGAGCAAACGCACCACTGAAGGTGGCGAGCGGGTGCT GCGGGTCACCGCCGAACGCCTGAACAGCCTGCTCGACCTGTCGAGCAAATCCCTGGTGGAAACCCAGCGCCTCAAGCCGC ACCTGGCCACCATGCAGCGCCTCAAACGCATGCAGAACAACGGCCTGCGGGCGCTGGAAAGTCTTAACGTTCATCTCAAG GAACACGCCCTGAGCCTTGAAGCTCAAGAGGCGCTGGAAGACGCGCGACGTTTGCTCGCCGAATCCCAGCAGTTGCTGGC AGAGAAAAACGCCGAACTCGACGAGTTTGCCTGGCAGGCGAGTCAGCGTGCGCAAGTGCTCTATGACACCGCGCTGGCCT GCCGCATGCGGCCGTTCGCCGATGTGCTGTCGGGTCAGGTGCGGATGGTGCGCGACCTCGGCCGCAGCCTCGGCAAGCAG GTGCGGCTGGAGATCGAGGGCGAGAAGACTCAGGTCGACCGCGATGTACTGGAAAAACTCGAAGCACCGCTGACGCACCT GCTGCGCAACGCGGTCGATCACGGCATCGAAACCCCACAGGAACGCCTGCTCAAGGGCAAGCCCGAGGAAGGCCTGATCC GTCTGCGCGCCTCGCATCAGGCCGGTCTGCTGGTGCTGGAACTGAGCGACGACGGCAATGGTGTGGATCTGGAAAAAGTC CGCCGCAGCATCGTCGAACGCCAGTTGTCGCCCGCGGAAACCGCCGCCCAGTTGAGTGAAGAGGAACTGCTGACCTTCCT GTTTCTGCCGGGTTTCAGTCTGCGCGACAAGGTCACCGAAGTGTCGGGTCGTGGCGTCGGTCTCGATGCTGTTCAGCACA TGGTCCGCCAGTTGCGCGGTGCGGTGGTGCTGGAGCAGACGGCGGGCGAGGGCAGTCGTTTCTATCTCGAAGTGCCGCTG ACCCTGTCGGTGGTGCGCAGCCTGGTGGTGGAGGTCGGCGACGAGGCCTATGCCTTCCCGCTGGCGCACATCGAGCGCAT GTGCGACCTGGCGCCGGAGGACATCGTGCAGGTCGAAGGGCGCCAGCATTTCTGGCACGAAGGCCGGCACGTCGGGCTGG TGGCGGCCAGTCAGTTGTTGCAACGCCCGGCCAGCCAGAACAGCGGCGAGACCCTGAAGGTCGTGGTGATCCGCGAGCGT GATGCGATCTACGGCGTGGCGGTCGAGCGCTTCATCGGCGAGCGCACGCTGGTGGTGCTGCCACTGGACGAACGGCTGGG CAAGGTGCAGGACATTTCCGCCGGGGCCTTGCTCGACGATGGCTCGGTGGTGCTGATCGTCGATGTTGAAGACATGCTGC GTTCGGTGGACAAACTGCTCAATACCGGGCGTCTGGAGCGCATTGCCCGCCACGGTAATCAGGCCGCGGAAGCCGCGCGC AAACGGATTCTGGTGGTCGACGACTCGCTGACCGTGCGCGAGCTGCAACGCAAGCTGCTGCTCAATCGCGGCTACGACGT GGCCGTTGCGGTGGACGGCATGGACGGCTGGAACGCCCTGCGCTCCGAGGACTTCGATCTGCTGATCACCGACATTGACA TGCCGCGCATGGACGGCATCGAACTGGTCTCGCTGCTGCGCCGCGACAACCGTCTGCAATCGTTGCCGGTGATGGTGGTG TCCTACAAGGATCGCGAGGAAGATCGCCGCCGTGGACTGGACGCCGGCGCCGACTATTATCTGGCCAAGGCCAGTTTTCA TGACGACGCCCTGCTCGACGCGGTGGTTGAGCTCATCGGAGGAGCGCGGGCATGA
Upstream 100 bases:
>100_bases CCAGTGCCAAATACACCCGAGGCGTGTTGCCTTTCAAAGGTCGCAGCCTGCGTTGGCTGGATGAAGAACAGCTGTTGTCC GCCGTGTCCCGGAGCCTCAC
Downstream 100 bases:
>100_bases AGATCGCAATCGTCAATGACATGCCTCTGGCGGTGGAAGCCCTGCGTCGTGCGCTGGCCTTCGAGCCGGCGCATCAGGTG GTGTGGGTCGCCAGCAACGG
Product: CheA Signal transduction histidine kinase (STHK)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MTPEQMRDASLLELFSLEAEAQTQVLSAGLLALERNPTQADQLESCMRAAHSLKGAARIVGIDSGVSVAHVMEDCLVSAQ EGRLFLRPEHIDALLQGTDLLMRIATPANGPQPADIEAYVALMGGLLDPAAPAVVPAAQSAPPMAEFQLQPLPVVEPAPV EVSVEVTEPEPAPRKSKRTTEGGERVLRVTAERLNSLLDLSSKSLVETQRLKPHLATMQRLKRMQNNGLRALESLNVHLK EHALSLEAQEALEDARRLLAESQQLLAEKNAELDEFAWQASQRAQVLYDTALACRMRPFADVLSGQVRMVRDLGRSLGKQ VRLEIEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIETPQERLLKGKPEEGLIRLRASHQAGLLVLELSDDGNGVDLEKV RRSIVERQLSPAETAAQLSEEELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVVLEQTAGEGSRFYLEVPL TLSVVRSLVVEVGDEAYAFPLAHIERMCDLAPEDIVQVEGRQHFWHEGRHVGLVAASQLLQRPASQNSGETLKVVVIRER DAIYGVAVERFIGERTLVVLPLDERLGKVQDISAGALLDDGSVVLIVDVEDMLRSVDKLLNTGRLERIARHGNQAAEAAR KRILVVDDSLTVRELQRKLLLNRGYDVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVSLLRRDNRLQSLPVMVV SYKDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGGARA
Sequences:
>Translated_764_residues MTPEQMRDASLLELFSLEAEAQTQVLSAGLLALERNPTQADQLESCMRAAHSLKGAARIVGIDSGVSVAHVMEDCLVSAQ EGRLFLRPEHIDALLQGTDLLMRIATPANGPQPADIEAYVALMGGLLDPAAPAVVPAAQSAPPMAEFQLQPLPVVEPAPV EVSVEVTEPEPAPRKSKRTTEGGERVLRVTAERLNSLLDLSSKSLVETQRLKPHLATMQRLKRMQNNGLRALESLNVHLK EHALSLEAQEALEDARRLLAESQQLLAEKNAELDEFAWQASQRAQVLYDTALACRMRPFADVLSGQVRMVRDLGRSLGKQ VRLEIEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIETPQERLLKGKPEEGLIRLRASHQAGLLVLELSDDGNGVDLEKV RRSIVERQLSPAETAAQLSEEELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVVLEQTAGEGSRFYLEVPL TLSVVRSLVVEVGDEAYAFPLAHIERMCDLAPEDIVQVEGRQHFWHEGRHVGLVAASQLLQRPASQNSGETLKVVVIRER DAIYGVAVERFIGERTLVVLPLDERLGKVQDISAGALLDDGSVVLIVDVEDMLRSVDKLLNTGRLERIARHGNQAAEAAR KRILVVDDSLTVRELQRKLLLNRGYDVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVSLLRRDNRLQSLPVMVV SYKDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGGARA >Mature_763_residues TPEQMRDASLLELFSLEAEAQTQVLSAGLLALERNPTQADQLESCMRAAHSLKGAARIVGIDSGVSVAHVMEDCLVSAQE GRLFLRPEHIDALLQGTDLLMRIATPANGPQPADIEAYVALMGGLLDPAAPAVVPAAQSAPPMAEFQLQPLPVVEPAPVE VSVEVTEPEPAPRKSKRTTEGGERVLRVTAERLNSLLDLSSKSLVETQRLKPHLATMQRLKRMQNNGLRALESLNVHLKE HALSLEAQEALEDARRLLAESQQLLAEKNAELDEFAWQASQRAQVLYDTALACRMRPFADVLSGQVRMVRDLGRSLGKQV RLEIEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIETPQERLLKGKPEEGLIRLRASHQAGLLVLELSDDGNGVDLEKVR RSIVERQLSPAETAAQLSEEELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVVLEQTAGEGSRFYLEVPLT LSVVRSLVVEVGDEAYAFPLAHIERMCDLAPEDIVQVEGRQHFWHEGRHVGLVAASQLLQRPASQNSGETLKVVVIRERD AIYGVAVERFIGERTLVVLPLDERLGKVQDISAGALLDDGSVVLIVDVEDMLRSVDKLLNTGRLERIARHGNQAAEAARK RILVVDDSLTVRELQRKLLLNRGYDVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVSLLRRDNRLQSLPVMVVS YKDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGGARA
Specific function: FrzE is involved in a sensory transduction pathway that controls the frequency at which cells reverse their gliding direction. FrzE seems to be capable of autophosphorylating itself on an histidine residue and then to transfer that group to an aspartate r
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=361, Percent_Identity=34.0720221606648, Blast_Score=205, Evalue=7e-54, Organism=Escherichia coli, GI1788191, Length=103, Percent_Identity=37.8640776699029, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788713, Length=101, Percent_Identity=39.6039603960396, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1786599, Length=103, Percent_Identity=34.9514563106796, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR005467 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF02518 HATPase_c; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 84222; Mature: 84090
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEQMRDASLLELFSLEAEAQTQVLSAGLLALERNPTQADQLESCMRAAHSLKGAARIV CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEE GIDSGVSVAHVMEDCLVSAQEGRLFLRPEHIDALLQGTDLLMRIATPANGPQPADIEAYV ECCCCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHH ALMGGLLDPAAPAVVPAAQSAPPMAEFQLQPLPVVEPAPVEVSVEVTEPEPAPRKSKRTT HHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC EGGERVLRVTAERLNSLLDLSSKSLVETQRLKPHLATMQRLKRMQNNGLRALESLNVHLK CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH EHALSLEAQEALEDARRLLAESQQLLAEKNAELDEFAWQASQRAQVLYDTALACRMRPFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH DVLSGQVRMVRDLGRSLGKQVRLEIEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIETPQ HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH ERLLKGKPEEGLIRLRASHQAGLLVLELSDDGNGVDLEKVRRSIVERQLSPAETAAQLSE HHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCH EELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVVLEQTAGEGSRFYLEVPL HHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECH TLSVVRSLVVEVGDEAYAFPLAHIERMCDLAPEDIVQVEGRQHFWHEGRHVGLVAASQLL HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHCCCEEHHHHHHHHH QRPASQNSGETLKVVVIRERDAIYGVAVERFIGERTLVVLPLDERLGKVQDISAGALLDD HCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECHHHCCCHHCCCCCCEECC GSVVLIVDVEDMLRSVDKLLNTGRLERIARHGNQAAEAARKRILVVDDSLTVRELQRKLL CCEEEEEEHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCEEEEECCCCHHHHHHHHHH LNRGYDVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVSLLRRDNRLQSLPVMVV HCCCCEEEEEEECCCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHCCEEEE SYKDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGGARA EECCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TPEQMRDASLLELFSLEAEAQTQVLSAGLLALERNPTQADQLESCMRAAHSLKGAARIV CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEE GIDSGVSVAHVMEDCLVSAQEGRLFLRPEHIDALLQGTDLLMRIATPANGPQPADIEAYV ECCCCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHH ALMGGLLDPAAPAVVPAAQSAPPMAEFQLQPLPVVEPAPVEVSVEVTEPEPAPRKSKRTT HHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC EGGERVLRVTAERLNSLLDLSSKSLVETQRLKPHLATMQRLKRMQNNGLRALESLNVHLK CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH EHALSLEAQEALEDARRLLAESQQLLAEKNAELDEFAWQASQRAQVLYDTALACRMRPFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH DVLSGQVRMVRDLGRSLGKQVRLEIEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIETPQ HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH ERLLKGKPEEGLIRLRASHQAGLLVLELSDDGNGVDLEKVRRSIVERQLSPAETAAQLSE HHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCH EELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVVLEQTAGEGSRFYLEVPL HHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECH TLSVVRSLVVEVGDEAYAFPLAHIERMCDLAPEDIVQVEGRQHFWHEGRHVGLVAASQLL HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHCCCEEHHHHHHHHH QRPASQNSGETLKVVVIRERDAIYGVAVERFIGERTLVVLPLDERLGKVQDISAGALLDD HCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECHHHCCCHHCCCCCCEECC GSVVLIVDVEDMLRSVDKLLNTGRLERIARHGNQAAEAARKRILVVDDSLTVRELQRKLL CCEEEEEEHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCEEEEECCCCHHHHHHHHHH LNRGYDVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVSLLRRDNRLQSLPVMVV HCCCCEEEEEEECCCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHCCEEEE SYKDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGGARA EECCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2165608; 2123853 [H]