| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457282
Identifier: 77457282
GI number: 77457282
Start: 1222600
End: 1223283
Strand: Direct
Name: 77457282
Synonym: Pfl01_1055
Alternate gene names: NA
Gene position: 1222600-1223283 (Clockwise)
Preceding gene: 77457281
Following gene: 77457283
Centisome position: 18.99
GC content: 65.94
Gene sequence:
>684_bases ATGATCCCGTCCGACACCTTGAACGTCACCCACGAAGACGCCCGGGCCATCGACGATTGCTGGAACCGCATCGGCATCCA CGGCGACAAGTCCTGTCCGCTGCTGGATGAGCACATCCATTGCCGCAATTGCTCGGTGTATTCCGCCGCCGCCACGCGCC TGCTCGACCGCTATGCGTTGCAGCAGGACGAGCGCGATCCGGTGGCGATCCAGGTCGAGACCGAGCTGAAGACCCGTTCG CTGCTGATGTTCCGCCTCGGCGAAGAATGGCTCGGTCTGGCCACCCGCAGTCTGGTGGAGGTCGCGCCGTTGCAGGCGAT TCACTCGCTGCCGCACCAGCGCTCCCGGGCCTTGCTCGGCGTGGCGAACGTGCGCGGTGCGCTGGTGGCGTGCCTGTCAC TGGTCGAACTGCTCGATCTCGACAGCAGCGCAGCCCCGGCGACCGGCGCGCGGATCATGCCGCGCATGCTGATCATCGCG GCCCAGGGCGGGCCGGTGGTGGTGCCGGTTGACGAAGTCGACGGGATTCACGCCATCGACGAGCGAATCCTCGACGCCGC GTCACGTTCCGGCGCACAGGCCAGTGCCAAATACACCCGAGGCGTGTTGCCTTTCAAAGGTCGCAGCCTGCGTTGGCTGG ATGAAGAACAGCTGTTGTCCGCCGTGTCCCGGAGCCTCACATGA
Upstream 100 bases:
>100_bases TGGCTGCGTTGCTGCAGGCCCAGGGCGACACGGCCGGCGCCAGACGATTGCAGGAGCGCGCCGCCCGCAGCGGCCGCACC GCCGACAGTGAGCGTAAACG
Downstream 100 bases:
>100_bases CCCCCGAGCAAATGCGCGACGCCTCCTTGCTCGAGCTGTTCAGCCTCGAAGCCGAAGCCCAGACCCAGGTGCTCAGCGCC GGGCTGCTGGCGCTGGAGCG
Product: CheW protein
Products: NA
Alternate protein names: Chemotaxis Signal Transduction Protein; CheW Domain-Containing Protein; Chemotaxis Protein; Signal Transducer CheW-Like Protein; Chemotaxis Signal Transduction Protein CheW; CheW-Like Domain-Containing; Chemotaxis Protein CheW; Chemotaxis-Related Protein; Chemotaxis-Like Protein; CheW Domain-Containing Protein WspD; CheW-Like Domain-Containing Protein
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MIPSDTLNVTHEDARAIDDCWNRIGIHGDKSCPLLDEHIHCRNCSVYSAAATRLLDRYALQQDERDPVAIQVETELKTRS LLMFRLGEEWLGLATRSLVEVAPLQAIHSLPHQRSRALLGVANVRGALVACLSLVELLDLDSSAAPATGARIMPRMLIIA AQGGPVVVPVDEVDGIHAIDERILDAASRSGAQASAKYTRGVLPFKGRSLRWLDEEQLLSAVSRSLT
Sequences:
>Translated_227_residues MIPSDTLNVTHEDARAIDDCWNRIGIHGDKSCPLLDEHIHCRNCSVYSAAATRLLDRYALQQDERDPVAIQVETELKTRS LLMFRLGEEWLGLATRSLVEVAPLQAIHSLPHQRSRALLGVANVRGALVACLSLVELLDLDSSAAPATGARIMPRMLIIA AQGGPVVVPVDEVDGIHAIDERILDAASRSGAQASAKYTRGVLPFKGRSLRWLDEEQLLSAVSRSLT >Mature_227_residues MIPSDTLNVTHEDARAIDDCWNRIGIHGDKSCPLLDEHIHCRNCSVYSAAATRLLDRYALQQDERDPVAIQVETELKTRS LLMFRLGEEWLGLATRSLVEVAPLQAIHSLPHQRSRALLGVANVRGALVACLSLVELLDLDSSAAPATGARIMPRMLIIA AQGGPVVVPVDEVDGIHAIDERILDAASRSGAQASAKYTRGVLPFKGRSLRWLDEEQLLSAVSRSLT
Specific function: Unknown
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24773; Mature: 24773
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSDTLNVTHEDARAIDDCWNRIGIHGDKSCPLLDEHIHCRNCSVYSAAATRLLDRYAL CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHH QQDERDPVAIQVETELKTRSLLMFRLGEEWLGLATRSLVEVAPLQAIHSLPHQRSRALLG HCCCCCCEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VANVRGALVACLSLVELLDLDSSAAPATGARIMPRMLIIAAQGGPVVVPVDEVDGIHAID HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEEEEEECCCCEEEECCCCCCHHHHH ERILDAASRSGAQASAKYTRGVLPFKGRSLRWLDEEQLLSAVSRSLT HHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MIPSDTLNVTHEDARAIDDCWNRIGIHGDKSCPLLDEHIHCRNCSVYSAAATRLLDRYAL CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHH QQDERDPVAIQVETELKTRSLLMFRLGEEWLGLATRSLVEVAPLQAIHSLPHQRSRALLG HCCCCCCEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VANVRGALVACLSLVELLDLDSSAAPATGARIMPRMLIIAAQGGPVVVPVDEVDGIHAID HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEEEEEECCCCEEEECCCCCCHHHHH ERILDAASRSGAQASAKYTRGVLPFKGRSLRWLDEEQLLSAVSRSLT HHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA