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The map label for this gene is recJ [H]

Identifier: 77457262

GI number: 77457262

Start: 1199011

End: 1200720

Strand: Direct

Name: recJ [H]

Synonym: Pfl01_1035

Alternate gene names: 77457262

Gene position: 1199011-1200720 (Clockwise)

Preceding gene: 77457261

Following gene: 77457263

Centisome position: 18.62

GC content: 62.87

Gene sequence:

>1710_bases
ATGCGTATCGATCCTCGCCCGTTGCCCGCCACTCTGCCGTTTCTCGGTGAACTGCCACCCCTGCTGACCCGCCTGTATGC
GGCGCGGGGCGTGCAGTCCGAGGCGGAGCTGGACAAGAGCCTGGCGCGGCTGATTCCGTTCCAGCAGCTCAAAGGGATCG
ATGCGGCGGTTGACCTGCTGGTGACAGCGCTGGAGCAGCGGCAGCGGATCCTGATCGTCGGCGATTTCGACGCCGACGGC
GCGACGGCCAGCACCGTGGGCGTGCTCGGTTTGCGCCTGCTGGGCGCGGCGCACGTCGATTATCTGGTGCCAAACCGCTT
CGAATACGGCTACGGCCTGACCCCGGAAATCGTCGAAGTCGCGATGACCCGCGAGCCGCAGTTGCTGATCACCGTCGACA
ACGGTATTTCCAGCGTTGAAGGTGTCGCGGCCGCGAAGCGCCATGGCCTGAAGGTCTTGATTACTGACCACCACTTGCCC
GGCGATGAACTGCCGCAGGCCGATGCACTGGTCAATCCGAACCAGCCCGGCTGCGAGTTCCCGAGCAAGGCGCTGGCCGG
GGTCGGGGTGATTTTCTATGTGTTGATGGCTTTGCGTGCACGTCTGCGCAGCCTTGGCTGGTACGAGAACAAGCCGCAGC
CAAACATCGGCGAACTGCTGGATCTGGTGGCGCTGGGCAGCGTTGCCGACGTGGTGCCGTTGGATGCCAACAACCGGATT
CTGGTGCACCAGGGTCTGGAGCGAATTCGCGCCGGACGTGCGCGGCCGGGGATCAAGGCGATCCTGGAAGTGGCCAAGCG
TGAGGCTTCGCGCATTACGTCTACCGACCTCGGATTTATCGTCGGCCCGCGCCTGAACGCGGCGGGACGTCTGGATGACA
TGAGCCTGGGCATCGAATGCCTGCTGACCCACGACGCTGCGCTGGCCCGGGAAATGGCGGCGCAACTGGACGGCATGAAT
CAGGACCGCAAATCCATCGAGCAAGGCATGCAGCGTGAAGCGCTGGCCCAGCTCAAGGACTTGCCGGTCGAGTCGATGCC
GTTCGGTTTGTGCCTGTTCGATCCGGAATGGCACCAGGGCGTCATCGGTATTCTGGCTTCGCGGATGAAGGAGCGGTATT
TCCGCCCGACCATCGCCTTCGCCGATGCCGGCGACGGCCTGCTCAAGGGCTCGGGCCGTTCGGTGCAGGGTTTCCATATT
CGTGATGCGCTGAGCGTGGTCGCGGCACAACATCCGGATCTGATCAGCAAGTACGGTGGCCATGCGATGGCGGCCGGTCT
GACCTTGCCGCAGGAGAATTTTTCGTTGTTTGCCGAGGCCTTCGACGCCGAGGTGCGTAGGCAACTTCGCGAAGAGGACC
TGACCGGGCGCCTGCTGTCGGACGGCACGCTGGCGGTCGAGGAGTTTCATCTGGAGCTGGCTCGTGCCCTGCGCCACGCC
GGGCCATGGGGCCAGCATTTTCCAGAACCGCTGTTTCACGGGGTGTTCCAGTTGGTCGAGCAGCGGGTTGTGGGTGAGCG
GCACCTGAAAGTGGTGCTGAAAACCGAATGCGGTTCGGTGAAGCTTGATGGCATCGCGTTCGGGATTGATCGCGATATCT
GGCCGAACCCGACGATCAAATGGGTCGAACTGGCTTACAAGCTCGACCTCAACGAGTTTCGCGGCAATGAGACCGTGCAG
TTGATGATTGCTCATATCGAGCCGCGCTAA

Upstream 100 bases:

>100_bases
CCAACACGAAGTCCAGCTCACCTGGCTGCAGGGTGAGCGCGGTTAAGTCCGCGCTACTCCGGAAAAATCCCACGTATTCA
AGAGAAGCTCCTGTCACCCC

Downstream 100 bases:

>100_bases
AGATCATTGCGCCCTTTACTGAAGGGCGCAGGCATCTTCAATTGTGCTGTTTCATTTCGGAACCCTCCCTCATCCCCGGA
TGTCGACTAGGCTCTAAGCA

Product: exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MRIDPRPLPATLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIDAAVDLLVTALEQRQRILIVGDFDADG
ATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEVAMTREPQLLITVDNGISSVEGVAAAKRHGLKVLITDHHLP
GDELPQADALVNPNQPGCEFPSKALAGVGVIFYVLMALRARLRSLGWYENKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKREASRITSTDLGFIVGPRLNAAGRLDDMSLGIECLLTHDAALAREMAAQLDGMN
QDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPEWHQGVIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHI
RDALSVVAAQHPDLISKYGGHAMAAGLTLPQENFSLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKTECGSVKLDGIAFGIDRDIWPNPTIKWVELAYKLDLNEFRGNETVQ
LMIAHIEPR

Sequences:

>Translated_569_residues
MRIDPRPLPATLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIDAAVDLLVTALEQRQRILIVGDFDADG
ATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEVAMTREPQLLITVDNGISSVEGVAAAKRHGLKVLITDHHLP
GDELPQADALVNPNQPGCEFPSKALAGVGVIFYVLMALRARLRSLGWYENKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKREASRITSTDLGFIVGPRLNAAGRLDDMSLGIECLLTHDAALAREMAAQLDGMN
QDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPEWHQGVIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHI
RDALSVVAAQHPDLISKYGGHAMAAGLTLPQENFSLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKTECGSVKLDGIAFGIDRDIWPNPTIKWVELAYKLDLNEFRGNETVQ
LMIAHIEPR
>Mature_569_residues
MRIDPRPLPATLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIDAAVDLLVTALEQRQRILIVGDFDADG
ATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEVAMTREPQLLITVDNGISSVEGVAAAKRHGLKVLITDHHLP
GDELPQADALVNPNQPGCEFPSKALAGVGVIFYVLMALRARLRSLGWYENKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKREASRITSTDLGFIVGPRLNAAGRLDDMSLGIECLLTHDAALAREMAAQLDGMN
QDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPEWHQGVIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHI
RDALSVVAAQHPDLISKYGGHAMAAGLTLPQENFSLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKTECGSVKLDGIAFGIDRDIWPNPTIKWVELAYKLDLNEFRGNETVQ
LMIAHIEPR

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=567, Percent_Identity=56.7901234567901, Blast_Score=651, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62421; Mature: 62421

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDPRPLPATLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIDAAVDLL
CCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHH
VTALEQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
HHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
AMTREPQLLITVDNGISSVEGVAAAKRHGLKVLITDHHLPGDELPQADALVNPNQPGCEF
HHCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PSKALAGVGVIFYVLMALRARLRSLGWYENKPQPNIGELLDLVALGSVADVVPLDANNRI
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCCEE
LVHQGLERIRAGRARPGIKAILEVAKREASRITSTDLGFIVGPRLNAAGRLDDMSLGIEC
EHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHCCEEE
LLTHDAALAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPEWHQG
EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALSVVAAQHPDLISKYGG
HHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCEEHHHHHHHHHHCCCHHHHHCCC
HAMAAGLTLPQENFSLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHC
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKTECGSVKLDGIAFGIDRDIWPNPTIK
CCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCCEEECCEEEECCCCCCCCCCEE
WVELAYKLDLNEFRGNETVQLMIAHIEPR
EEEEEEEECHHHHCCCCEEEEEEEECCCC
>Mature Secondary Structure
MRIDPRPLPATLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIDAAVDLL
CCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHH
VTALEQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
HHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
AMTREPQLLITVDNGISSVEGVAAAKRHGLKVLITDHHLPGDELPQADALVNPNQPGCEF
HHCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PSKALAGVGVIFYVLMALRARLRSLGWYENKPQPNIGELLDLVALGSVADVVPLDANNRI
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCCEE
LVHQGLERIRAGRARPGIKAILEVAKREASRITSTDLGFIVGPRLNAAGRLDDMSLGIEC
EHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHCCEEE
LLTHDAALAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPEWHQG
EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALSVVAAQHPDLISKYGG
HHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCEEHHHHHHHHHHCCCHHHHHCCC
HAMAAGLTLPQENFSLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHC
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKTECGSVKLDGIAFGIDRDIWPNPTIK
CCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCCEEECCEEEECCCCCCCCCCEE
WVELAYKLDLNEFRGNETVQLMIAHIEPR
EEEEEEEECHHHHCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]