| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yaeQ [H]
Identifier: 77457261
GI number: 77457261
Start: 1198414
End: 1198956
Strand: Direct
Name: yaeQ [H]
Synonym: Pfl01_1034
Alternate gene names: 77457261
Gene position: 1198414-1198956 (Clockwise)
Preceding gene: 77457258
Following gene: 77457262
Centisome position: 18.61
GC content: 59.85
Gene sequence:
>543_bases ATGGCCCAGCCGTCCACTACCTACAAATTCGAACTGAACCTCACCGACCTCGACCGTAGCGTCTACGAGAACGTGAAGCA GACTATCGCCCGCCATCCTTCGGAAACCGAAGAACGCATGACCGTGCGGCTGTTGGCCTACGCGCTCTGGTACAACGAGC AACTGTCGTTCGGTCGTGGTCTGTCGGACGTGGATGAACCTGCGCTGTGGGAAAAGAGCCTGGACGACCGTGTCCTGCAC TGGATCGAAGTCGGCCAACCGGACGCCGATCGCTTGACCTGGTGCTCCCGTCGCACCGAGCGCACCAGTCTGCTGGCCTA CGGCAGCCTGCGCGTCTGGGAAGGCAAAGTGATTCCGGCAATCAAGAACCTGAAGAACGTCAACATTGCCGCAGTCCCGC AGGAAGTGCTGGAAACCCTGGCCAAGGACATGCCCCGCGTCATCAAGTGGGACGTAATGATCAGCGAAGGCACGATCTTC GTCACCGATGACCGTGGCCAACACGAAGTCCAGCTCACCTGGCTGCAGGGTGAGCGCGGTTAA
Upstream 100 bases:
>100_bases AGCCGGCTGTCAGTCGCGCAAGGTTGATCGCCATCAATTCGTGGATTGCCTACAGCATCGGTTAGACTTGCCGACTTTCC TCGTATCAAGAAGCTCGTTC
Downstream 100 bases:
>100_bases GTCCGCGCTACTCCGGAAAAATCCCACGTATTCAAGAGAAGCTCCTGTCACCCCATGCGTATCGATCCTCGCCCGTTGCC CGCCACTCTGCCGTTTCTCG
Product: YaeQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAQPSTTYKFELNLTDLDRSVYENVKQTIARHPSETEERMTVRLLAYALWYNEQLSFGRGLSDVDEPALWEKSLDDRVLH WIEVGQPDADRLTWCSRRTERTSLLAYGSLRVWEGKVIPAIKNLKNVNIAAVPQEVLETLAKDMPRVIKWDVMISEGTIF VTDDRGQHEVQLTWLQGERG
Sequences:
>Translated_180_residues MAQPSTTYKFELNLTDLDRSVYENVKQTIARHPSETEERMTVRLLAYALWYNEQLSFGRGLSDVDEPALWEKSLDDRVLH WIEVGQPDADRLTWCSRRTERTSLLAYGSLRVWEGKVIPAIKNLKNVNIAAVPQEVLETLAKDMPRVIKWDVMISEGTIF VTDDRGQHEVQLTWLQGERG >Mature_179_residues AQPSTTYKFELNLTDLDRSVYENVKQTIARHPSETEERMTVRLLAYALWYNEQLSFGRGLSDVDEPALWEKSLDDRVLHW IEVGQPDADRLTWCSRRTERTSLLAYGSLRVWEGKVIPAIKNLKNVNIAAVPQEVLETLAKDMPRVIKWDVMISEGTIFV TDDRGQHEVQLTWLQGERG
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=175, Percent_Identity=33.7142857142857, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20803; Mature: 20672
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPSTTYKFELNLTDLDRSVYENVKQTIARHPSETEERMTVRLLAYALWYNEQLSFGRG CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC LSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGSLRVWEGKVIPA CCCCCCCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHCCCCHHEEEEECCEEEECCCCCHH IKNLKNVNIAAVPQEVLETLAKDMPRVIKWDVMISEGTIFVTDDRGQHEVQLTWLQGERG HHCCCCCCEEECCHHHHHHHHHCCCHHEEEEEEEECCEEEEECCCCCEEEEEEEEECCCC >Mature Secondary Structure AQPSTTYKFELNLTDLDRSVYENVKQTIARHPSETEERMTVRLLAYALWYNEQLSFGRG CCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC LSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGSLRVWEGKVIPA CCCCCCCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHCCCCHHEEEEECCEEEECCCCCHH IKNLKNVNIAAVPQEVLETLAKDMPRVIKWDVMISEGTIFVTDDRGQHEVQLTWLQGERG HHCCCCCCEEECCHHHHHHHHHCCCHHEEEEEEEECCEEEEECCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]