| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457162
Identifier: 77457162
GI number: 77457162
Start: 1086217
End: 1086726
Strand: Reverse
Name: 77457162
Synonym: Pfl01_0935
Alternate gene names: NA
Gene position: 1086726-1086217 (Counterclockwise)
Preceding gene: 77457163
Following gene: 77457159
Centisome position: 16.88
GC content: 45.49
Gene sequence:
>510_bases ATGAACATCCTGACGACCGACAAAATCATCCGCTACAGCAAAGTCATATTAATGGCTTACATCAGTTTCTTTGGCGTACT GGTGATGATCCACAATTTCACCGACTATGACTCAAACTACACTTACGTTTCCCATATCCTGAGCATGGACACGACCACCA GCAGTGAAAACATCAAGTATCGAGCCATTGACTCGCCAATGATTCACCACCGGATCTACTGGTTCATCATCACGATGGAA GTCACCTATACGGTGCTGTGCCTGATAGGCACCTATCAGCTATATCGAAACATCAACGCCTCGGCAGAGTTATTTCACGA GGCAAAAAGTTTCTCGATCATGGGAATACTGGCAGCAATATTCATTTACTACGTCTGCCTGCAAACTGTAGGTGTGGAAT GGTTTGACATGGACACCTCTCAATCCTGGAATGCCAAGGACTGGGCACGGCATATTGTTGACTTTATATTCCCGGTGATG ATCTACATCACATTGAAAGTCGAGCGCTGA
Upstream 100 bases:
>100_bases TACACAAATTGAAATTGAACAGCAAACCAATTCAAACAACAGCATTATAAGCTCTCCCTGGCTGCCGAATTATCGACAAA CGCTATGGAGAACTTAAATC
Downstream 100 bases:
>100_bases AGTTCAGCGCTCGTTTATCTCACGCCAACTTTCCTTGTACCGGCGACACTAGCGCCTTCGGTTTACGAAACACCAACACA TTGCCCAGCATCACCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNILTTDKIIRYSKVILMAYISFFGVLVMIHNFTDYDSNYTYVSHILSMDTTTSSENIKYRAIDSPMIHHRIYWFIITME VTYTVLCLIGTYQLYRNINASAELFHEAKSFSIMGILAAIFIYYVCLQTVGVEWFDMDTSQSWNAKDWARHIVDFIFPVM IYITLKVER
Sequences:
>Translated_169_residues MNILTTDKIIRYSKVILMAYISFFGVLVMIHNFTDYDSNYTYVSHILSMDTTTSSENIKYRAIDSPMIHHRIYWFIITME VTYTVLCLIGTYQLYRNINASAELFHEAKSFSIMGILAAIFIYYVCLQTVGVEWFDMDTSQSWNAKDWARHIVDFIFPVM IYITLKVER >Mature_169_residues MNILTTDKIIRYSKVILMAYISFFGVLVMIHNFTDYDSNYTYVSHILSMDTTTSSENIKYRAIDSPMIHHRIYWFIITME VTYTVLCLIGTYQLYRNINASAELFHEAKSFSIMGILAAIFIYYVCLQTVGVEWFDMDTSQSWNAKDWARHIVDFIFPVM IYITLKVER
Specific function: Unknown
COG id: COG5472
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19912; Mature: 19912
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILTTDKIIRYSKVILMAYISFFGVLVMIHNFTDYDSNYTYVSHILSMDTTTSSENIKY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEE RAIDSPMIHHRIYWFIITMEVTYTVLCLIGTYQLYRNINASAELFHEAKSFSIMGILAAI EECCCCHHHHEEEEHEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FIYYVCLQTVGVEWFDMDTSQSWNAKDWARHIVDFIFPVMIYITLKVER HHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MNILTTDKIIRYSKVILMAYISFFGVLVMIHNFTDYDSNYTYVSHILSMDTTTSSENIKY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEE RAIDSPMIHHRIYWFIITMEVTYTVLCLIGTYQLYRNINASAELFHEAKSFSIMGILAAI EECCCCHHHHEEEEHEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FIYYVCLQTVGVEWFDMDTSQSWNAKDWARHIVDFIFPVMIYITLKVER HHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA