| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fecR [H]
Identifier: 77457157
GI number: 77457157
Start: 1079964
End: 1080953
Strand: Direct
Name: fecR [H]
Synonym: Pfl01_0930
Alternate gene names: 77457157
Gene position: 1079964-1080953 (Clockwise)
Preceding gene: 77457156
Following gene: 77457158
Centisome position: 16.77
GC content: 64.34
Gene sequence:
>990_bases GTGAACAACACCGAACGCGTCGTACCGACGCCCGCGCAGGAACAGGCCGCTTTTGCCTGGCTGAGCCTGCTGCACGACCG CCCGAGCACCGGTGATCAACTGACCTTCAGCCAGTGGCTGCACGCTGACCCGGCTCACGCCGAGGCCTACGCCCAGGCGC AGGTGGTTTGGGAATTGAGCGAAGGGCCGGCGCGCACTCTGGCCGATGAAGACGCGCTGGCGTTGCAGGGTTTGCTCAAT GCGATGGACCAACCGCGCCGTGTACCGGTTCGACGCTGGGCCGGCGCGCTGGCCATGGCGGCCTGTCTGTTGTTGATGAT CAGCCTCGGCACAGGTTGGCAGCCGCAGCGCTGGATCGATGATCTGGGCGCCGATTACGTGTCGGCACCGGGCGAGATCC GCACCGTGATCCTCGCCGATCAATCGCAGGTGACGCTGGACGCCGACAGCGCCATCGCCGTGGATTTCAGTCACGGCGAG CGGCATGTGCAACTGCGCCGGGGCGCCGGATTTTTCAGCGTGACTCACACGGGCGATCCTTTTGTGGTGGAGGCCGAGAA AGGCCAGGCGCGAGTGTTGGGCACGCAGTTCGAAGTGCGCCTGCAACCGCAAGGTGCCCAAGTGACAGTGCTGTCCGGAC GCGTCGGCGTGACGCCATCCCGCGATGGCCAACAGCAGGTTCTGACCGCTGGCCAGCAAGTGGCGTACGGCGCAGGCACC GCGGAAAAACTCCACGCCGTGGACAGTGAAGCGCAACTGGCATGGCGTCAGGGCTGGCTGACTTACTACAAGTCGACACT GGCCGATGTGGTGCAGGATCTGCGGCGTTATTACCCCGGGCGCATCGTGTTGCTCAACGACGAACTGGGCGCGCGCAAGG TCAGCGGCAGCTTTCCGAGCAAGGATCCGCAAGCCGTGCTGAATTCGCTGCAAGGGGTGTTGGGATTAGAGCAGCATCAG GTGTTGGGCAAGCTGATCATCCTGCGCTGA
Upstream 100 bases:
>100_bases GCCTGTCCCAAAGCGCTGTGGAAAAACATATGATGCGCGCCCTCGAGGCCTGCAAGGCCAGCCTGCGCGAACCCGCGCCA CGCATGCCAGGGAAAGCACC
Downstream 100 bases:
>100_bases AAATATTTTCAAATTTGTGGTGAGGTAAATCCCGACGCCATCCGTGTAGTGACTGAAACTGCGAGTCATTCGCATCCGTT GCGGTTCTACACAGGTCATG
Product: putative FecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNNTERVVPTPAQEQAAFAWLSLLHDRPSTGDQLTFSQWLHADPAHAEAYAQAQVVWELSEGPARTLADEDALALQGLLN AMDQPRRVPVRRWAGALAMAACLLLMISLGTGWQPQRWIDDLGADYVSAPGEIRTVILADQSQVTLDADSAIAVDFSHGE RHVQLRRGAGFFSVTHTGDPFVVEAEKGQARVLGTQFEVRLQPQGAQVTVLSGRVGVTPSRDGQQQVLTAGQQVAYGAGT AEKLHAVDSEAQLAWRQGWLTYYKSTLADVVQDLRRYYPGRIVLLNDELGARKVSGSFPSKDPQAVLNSLQGVLGLEQHQ VLGKLIILR
Sequences:
>Translated_329_residues MNNTERVVPTPAQEQAAFAWLSLLHDRPSTGDQLTFSQWLHADPAHAEAYAQAQVVWELSEGPARTLADEDALALQGLLN AMDQPRRVPVRRWAGALAMAACLLLMISLGTGWQPQRWIDDLGADYVSAPGEIRTVILADQSQVTLDADSAIAVDFSHGE RHVQLRRGAGFFSVTHTGDPFVVEAEKGQARVLGTQFEVRLQPQGAQVTVLSGRVGVTPSRDGQQQVLTAGQQVAYGAGT AEKLHAVDSEAQLAWRQGWLTYYKSTLADVVQDLRRYYPGRIVLLNDELGARKVSGSFPSKDPQAVLNSLQGVLGLEQHQ VLGKLIILR >Mature_329_residues MNNTERVVPTPAQEQAAFAWLSLLHDRPSTGDQLTFSQWLHADPAHAEAYAQAQVVWELSEGPARTLADEDALALQGLLN AMDQPRRVPVRRWAGALAMAACLLLMISLGTGWQPQRWIDDLGADYVSAPGEIRTVILADQSQVTLDADSAIAVDFSHGE RHVQLRRGAGFFSVTHTGDPFVVEAEKGQARVLGTQFEVRLQPQGAQVTVLSGRVGVTPSRDGQQQVLTAGQQVAYGAGT AEKLHAVDSEAQLAWRQGWLTYYKSTLADVVQDLRRYYPGRIVLLNDELGARKVSGSFPSKDPQAVLNSLQGVLGLEQHQ VLGKLIILR
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=198, Percent_Identity=30.8080808080808, Blast_Score=78, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35887; Mature: 35887
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTERVVPTPAQEQAAFAWLSLLHDRPSTGDQLTFSQWLHADPAHAEAYAQAQVVWELS CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCHHHHHHEEEEEEEEC EGPARTLADEDALALQGLLNAMDQPRRVPVRRWAGALAMAACLLLMISLGTGWQPQRWID CCCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH DLGADYVSAPGEIRTVILADQSQVTLDADSAIAVDFSHGERHVQLRRGAGFFSVTHTGDP HHCCHHHCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCEEEEEECCCCEEEEEECCCC FVVEAEKGQARVLGTQFEVRLQPQGAQVTVLSGRVGVTPSRDGQQQVLTAGQQVAYGAGT EEEECCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCCC AEKLHAVDSEAQLAWRQGWLTYYKSTLADVVQDLRRYYPGRIVLLNDELGARKVSGSFPS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCC KDPQAVLNSLQGVLGLEQHQVLGKLIILR CCHHHHHHHHHHHHCCHHHHHHHHHEECC >Mature Secondary Structure MNNTERVVPTPAQEQAAFAWLSLLHDRPSTGDQLTFSQWLHADPAHAEAYAQAQVVWELS CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCHHHHHHEEEEEEEEC EGPARTLADEDALALQGLLNAMDQPRRVPVRRWAGALAMAACLLLMISLGTGWQPQRWID CCCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH DLGADYVSAPGEIRTVILADQSQVTLDADSAIAVDFSHGERHVQLRRGAGFFSVTHTGDP HHCCHHHCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCEEEEEECCCCEEEEEECCCC FVVEAEKGQARVLGTQFEVRLQPQGAQVTVLSGRVGVTPSRDGQQQVLTAGQQVAYGAGT EEEECCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCCC AEKLHAVDSEAQLAWRQGWLTYYKSTLADVVQDLRRYYPGRIVLLNDELGARKVSGSFPS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCC KDPQAVLNSLQGVLGLEQHQVLGKLIILR CCHHHHHHHHHHHHCCHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]