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The map label for this gene is rlpA [C]

Identifier: 77457061

GI number: 77457061

Start: 982321

End: 982695

Strand: Reverse

Name: rlpA [C]

Synonym: Pfl01_0834

Alternate gene names: 77457061

Gene position: 982695-982321 (Counterclockwise)

Preceding gene: 77457062

Following gene: 77457060

Centisome position: 15.26

GC content: 64.27

Gene sequence:

>375_bases
ATGAAACGTCTGCTCGGCGCCTGCGCCCTGCTCTCCTTGCTGGCCGGTTGCGCCAGCACCGATGTCATCGACCCGCACGG
TTACGACCAGACCGGCGTCGCCTCCTATTACGGTGCCAAGCACCACGGTAAACGCACCGCCAGCGGCGAAGCGTTCAACC
AGAATTCTTTGACAGCCGCCCACCGCCAGTTGCCGTTCGGCACCCGGGTGAAGGTCACCAACCTGAAAAACGATGAATCC
GTCGTGGTCCGCATCAACGACCGCGGCCCGCACACCCGTGGTCGCCTGATCGATGTTTCACGTGCGGCGGCCGAACAGCT
CGGTATGCTGCGCAGTGGAACCGCCCGCGTTCGGGTCCAGGCCCTCGACGACTGA

Upstream 100 bases:

>100_bases
AGCATGCTCGCGACAGCGCAATTTCAGACACTGCAAAAGTGACTGACGGATCGCCTTCGCCAGCAAGCTCGCTCCCACAT
TGTTATTTGGGAGCTTTCGA

Downstream 100 bases:

>100_bases
TGGAGCGTCCACTATTTTCGGACTGACCGACTTACCCCTGATCAGTGTGATCGAATTGCTCAGCGGGCTGTTCCTGCTGA
TCGCCGGCGCCGAGCTGATG

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKRLLGACALLSLLAGCASTDVIDPHGYDQTGVASYYGAKHHGKRTASGEAFNQNSLTAAHRQLPFGTRVKVTNLKNDES
VVVRINDRGPHTRGRLIDVSRAAAEQLGMLRSGTARVRVQALDD

Sequences:

>Translated_124_residues
MKRLLGACALLSLLAGCASTDVIDPHGYDQTGVASYYGAKHHGKRTASGEAFNQNSLTAAHRQLPFGTRVKVTNLKNDES
VVVRINDRGPHTRGRLIDVSRAAAEQLGMLRSGTARVRVQALDD
>Mature_124_residues
MKRLLGACALLSLLAGCASTDVIDPHGYDQTGVASYYGAKHHGKRTASGEAFNQNSLTAAHRQLPFGTRVKVTNLKNDES
VVVRINDRGPHTRGRLIDVSRAAAEQLGMLRSGTARVRVQALDD

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=101, Percent_Identity=45.5445544554455, Blast_Score=90, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 13340; Mature: 13340

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLGACALLSLLAGCASTDVIDPHGYDQTGVASYYGAKHHGKRTASGEAFNQNSLTAA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHH
HRQLPFGTRVKVTNLKNDESVVVRINDRGPHTRGRLIDVSRAAAEQLGMLRSGTARVRVQ
HHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEE
ALDD
EECC
>Mature Secondary Structure
MKRLLGACALLSLLAGCASTDVIDPHGYDQTGVASYYGAKHHGKRTASGEAFNQNSLTAA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHH
HRQLPFGTRVKVTNLKNDESVVVRINDRGPHTRGRLIDVSRAAAEQLGMLRSGTARVRVQ
HHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEE
ALDD
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]