Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457013
Identifier: 77457013
GI number: 77457013
Start: 922344
End: 924533
Strand: Direct
Name: 77457013
Synonym: Pfl01_0786
Alternate gene names: NA
Gene position: 922344-924533 (Clockwise)
Preceding gene: 77457011
Following gene: 77457014
Centisome position: 14.33
GC content: 62.05
Gene sequence:
>2190_bases ATGCACAACGACGGGAATGTAGTGCCTCTGCACAAGGCCACTACCGATCAGGCGACTCACTCGCCGCTCGCCCGCCTGCC TGTGATTCTGCTTCAGGTTCGCGACAAGGCTGCCCAGCGCCTGCGCAACGGTTTGCAGGAGTTGTTCGATAACGCCGACG ACACCCTGTTCGAAATGGCCGATCGGGCACGCAATGACGTCGAACAGAACATTTTTTTCGAAGCCATGCGCGACCTGCGC CTCAAGCGCAAGAACATCGAGCGCGGTTTTCTCGAGCAGTTCTTCGAGGCCTTTGTCGGCCTCACTCAATTCGATCCCGT CCCCACCGTCCTCTCTCATGCTTTGCAGCACGAGGACACGACAGTGCGCACCGATGACATGGAGCGCAACGTCGCGGTCG AGACCATGGTCGGCCGCGTACTGAATCGCGACGGTTTCGCCCTCGATCAACTGACCACGCGATTCAATGCGCTGTTGGGC AAGACCCTGGACGATCATTACAACCCGCTGGGCCCGGCGATGCTTTGCGAATACTTCCTGCAGGCCGGGCGCAACTTGGG GGTGGAGATCAAGGTCAAACTGATCCTGCTCAAACTGTTCGAGCGGTATGTGCTGGCCGATACCGATCAACTCTACGCCG AAGCCAATCAACTGCTGATCGCCACGGGCGTATTGCCCGAGCTCAAGCCGGCACCGGCCCGTCGCGCCATCGATCAGGCC GTGGCCAGCGTGCAGGGCGAATTCGAGGGCGTCGACAAAACCCAGACCGATGCGGGCGTGCAGGAGGTCTTCGCCGCGTT GCAGGAGTTGCTGCTGCACGTGCGCGGCACCGTTGCGCCGACCCTGGAGCCCAGCGCTCCCGCCCAGCCGATTTCCACCC GCGACCTGCTGCGCCTGCTCTCGCACCTGCAGCAATACGTACCGGCGCTGGCAGTGCAGGACGATTTCGATCTGCGCCAT CAACTTGAACAGTTGCTGACCCGGGTCAGCGTGCGCAGCGGCAAATCACGAATCGTCGGCGGGGCGGACGAGGACGTGAT CAATCTGGTGGCGATGGTCTTCGACTGCATCCTCGATGATCGCAACCTGCCGGACTCGCTCAAGGCGCTGATCGCCCGGT TGCAGATCCCGATGTTGAAGGTCGCGGTGATCGACAAAAGCTTCTTCAGCCGCAGCAGCCACCCGGCGCGGCGGCTGCTC AATGAAATTGCCGAGGCGGCGATGGGCTGGGGCGAGTGCGACGGTAATGCGCGCGACAGCCTGTATCTGCGCATCGAACA GGTGGTGCAGCGCCTGCTGGCGGATTTCGTCGATGACCCGGCGATTTTTTCCGAGTTGCTGGCGGATTTCCTCGCCTTCA CCAGTGACGAACGCCGTCGCAGCGAATTGCTTGAACAGCGTTTGCGCGATGCCGAAGAGGGCCGGGCGAAAACTGAACTG GCTCGTCAGCGGGTCGAGCAGGCGTTGAATCAGGCGTTGCTGGGCAAAGTCCTGCCACCGTCGGTAGTGACGTTCGTGCA GGAGGCCTGGAGCAAGGTGTTGCTGCTGACTTGCCTCAAGCACGGCGATCAGTCCGCCGAATGGCATGCCGACGTGCAGA CCATGGAGCAATTGATCTGGAGTGTGCAGCGCCACGACGACGCCGAAGCCGGTCTGCGTCTGTTGGCGCTGGTGCCGGGA TTGCTCAAGTCATTGAGGGACGGCCTGAGCACTTCAGCTTTTGACCCGTTTGCCACCAGCGGCTTTTTCAGTGAGTTGGA AGCGCTGCATGTGCGCCTGCTCGAGCCGTCCAGCGCACCGGATCAGTCCGTGCTGCCGGAAATGATCGAGGTGTCGCAGA CGATTGTCTTGCAGATGGCCGACGACGGTCTCAAGCCACGCACGCCAGCGCGTTTGCCAGCCGACGATGCGGGTCTGCGC CAGGTTGATCAGCTGCGTCTGGGCAGTTGGGTGGCGTTCGAGGAAGACGAAGAACACACCCTGCGCTGCAAACTGGCGGC GATCATCGAGGCGACCGGCAAGTACGTGTTCGTCGACCGTACCGGGATGAAAGTGCTGGAGCGCGAGCGCACCGAACTGG CCCTGGCGTTTCGTCGCGGCGCGGTGCGGACGCTGGACGACACCTTACTGTTCGATCGGGCGCTGGAGTCGGTGCTCGGC AATCTGCGGCGGCTCAATCGCGGCAAGTGA
Upstream 100 bases:
>100_bases CTGACGGCTCTGGCGCCGGGGACAACTTTTGCAAGATAATCCGCCTTGCATTTGACGCCATGACTTTGACGTCGGCGAAT CACCGTTTCAGGAGGCTTGG
Downstream 100 bases:
>100_bases TCGCGCGCCGGGGGCCGATCACGGCATACTGGTCGCCAACACAGTCGGCGTTGAAGGAATCGGTATGCAGTTGGATCCCG CAAGCGGGTGGTGTCACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 729; Mature: 729
Protein sequence:
>729_residues MHNDGNVVPLHKATTDQATHSPLARLPVILLQVRDKAAQRLRNGLQELFDNADDTLFEMADRARNDVEQNIFFEAMRDLR LKRKNIERGFLEQFFEAFVGLTQFDPVPTVLSHALQHEDTTVRTDDMERNVAVETMVGRVLNRDGFALDQLTTRFNALLG KTLDDHYNPLGPAMLCEYFLQAGRNLGVEIKVKLILLKLFERYVLADTDQLYAEANQLLIATGVLPELKPAPARRAIDQA VASVQGEFEGVDKTQTDAGVQEVFAALQELLLHVRGTVAPTLEPSAPAQPISTRDLLRLLSHLQQYVPALAVQDDFDLRH QLEQLLTRVSVRSGKSRIVGGADEDVINLVAMVFDCILDDRNLPDSLKALIARLQIPMLKVAVIDKSFFSRSSHPARRLL NEIAEAAMGWGECDGNARDSLYLRIEQVVQRLLADFVDDPAIFSELLADFLAFTSDERRRSELLEQRLRDAEEGRAKTEL ARQRVEQALNQALLGKVLPPSVVTFVQEAWSKVLLLTCLKHGDQSAEWHADVQTMEQLIWSVQRHDDAEAGLRLLALVPG LLKSLRDGLSTSAFDPFATSGFFSELEALHVRLLEPSSAPDQSVLPEMIEVSQTIVLQMADDGLKPRTPARLPADDAGLR QVDQLRLGSWVAFEEDEEHTLRCKLAAIIEATGKYVFVDRTGMKVLERERTELALAFRRGAVRTLDDTLLFDRALESVLG NLRRLNRGK
Sequences:
>Translated_729_residues MHNDGNVVPLHKATTDQATHSPLARLPVILLQVRDKAAQRLRNGLQELFDNADDTLFEMADRARNDVEQNIFFEAMRDLR LKRKNIERGFLEQFFEAFVGLTQFDPVPTVLSHALQHEDTTVRTDDMERNVAVETMVGRVLNRDGFALDQLTTRFNALLG KTLDDHYNPLGPAMLCEYFLQAGRNLGVEIKVKLILLKLFERYVLADTDQLYAEANQLLIATGVLPELKPAPARRAIDQA VASVQGEFEGVDKTQTDAGVQEVFAALQELLLHVRGTVAPTLEPSAPAQPISTRDLLRLLSHLQQYVPALAVQDDFDLRH QLEQLLTRVSVRSGKSRIVGGADEDVINLVAMVFDCILDDRNLPDSLKALIARLQIPMLKVAVIDKSFFSRSSHPARRLL NEIAEAAMGWGECDGNARDSLYLRIEQVVQRLLADFVDDPAIFSELLADFLAFTSDERRRSELLEQRLRDAEEGRAKTEL ARQRVEQALNQALLGKVLPPSVVTFVQEAWSKVLLLTCLKHGDQSAEWHADVQTMEQLIWSVQRHDDAEAGLRLLALVPG LLKSLRDGLSTSAFDPFATSGFFSELEALHVRLLEPSSAPDQSVLPEMIEVSQTIVLQMADDGLKPRTPARLPADDAGLR QVDQLRLGSWVAFEEDEEHTLRCKLAAIIEATGKYVFVDRTGMKVLERERTELALAFRRGAVRTLDDTLLFDRALESVLG NLRRLNRGK >Mature_729_residues MHNDGNVVPLHKATTDQATHSPLARLPVILLQVRDKAAQRLRNGLQELFDNADDTLFEMADRARNDVEQNIFFEAMRDLR LKRKNIERGFLEQFFEAFVGLTQFDPVPTVLSHALQHEDTTVRTDDMERNVAVETMVGRVLNRDGFALDQLTTRFNALLG KTLDDHYNPLGPAMLCEYFLQAGRNLGVEIKVKLILLKLFERYVLADTDQLYAEANQLLIATGVLPELKPAPARRAIDQA VASVQGEFEGVDKTQTDAGVQEVFAALQELLLHVRGTVAPTLEPSAPAQPISTRDLLRLLSHLQQYVPALAVQDDFDLRH QLEQLLTRVSVRSGKSRIVGGADEDVINLVAMVFDCILDDRNLPDSLKALIARLQIPMLKVAVIDKSFFSRSSHPARRLL NEIAEAAMGWGECDGNARDSLYLRIEQVVQRLLADFVDDPAIFSELLADFLAFTSDERRRSELLEQRLRDAEEGRAKTEL ARQRVEQALNQALLGKVLPPSVVTFVQEAWSKVLLLTCLKHGDQSAEWHADVQTMEQLIWSVQRHDDAEAGLRLLALVPG LLKSLRDGLSTSAFDPFATSGFFSELEALHVRLLEPSSAPDQSVLPEMIEVSQTIVLQMADDGLKPRTPARLPADDAGLR QVDQLRLGSWVAFEEDEEHTLRCKLAAIIEATGKYVFVDRTGMKVLERERTELALAFRRGAVRTLDDTLLFDRALESVLG NLRRLNRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81711; Mature: 81711
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNDGNVVPLHKATTDQATHSPLARLPVILLQVRDKAAQRLRNGLQELFDNADDTLFEMA CCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DRARNDVEQNIFFEAMRDLRLKRKNIERGFLEQFFEAFVGLTQFDPVPTVLSHALQHEDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC TVRTDDMERNVAVETMVGRVLNRDGFALDQLTTRFNALLGKTLDDHYNPLGPAMLCEYFL CEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QAGRNLGVEIKVKLILLKLFERYVLADTDQLYAEANQLLIATGVLPELKPAPARRAIDQA HCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHH VASVQGEFEGVDKTQTDAGVQEVFAALQELLLHVRGTVAPTLEPSAPAQPISTRDLLRLL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH SHLQQYVPALAVQDDFDLRHQLEQLLTRVSVRSGKSRIVGGADEDVINLVAMVFDCILDD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC RNLPDSLKALIARLQIPMLKVAVIDKSFFSRSSHPARRLLNEIAEAAMGWGECDGNARDS CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH LYLRIEQVVQRLLADFVDDPAIFSELLADFLAFTSDERRRSELLEQRLRDAEEGRAKTEL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHH ARQRVEQALNQALLGKVLPPSVVTFVQEAWSKVLLLTCLKHGDQSAEWHADVQTMEQLIW HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SVQRHDDAEAGLRLLALVPGLLKSLRDGLSTSAFDPFATSGFFSELEALHVRLLEPSSAP HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC DQSVLPEMIEVSQTIVLQMADDGLKPRTPARLPADDAGLRQVDQLRLGSWVAFEEDEEHT CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCHH LRCKLAAIIEATGKYVFVDRTGMKVLERERTELALAFRRGAVRTLDDTLLFDRALESVLG HHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH NLRRLNRGK HHHHHCCCC >Mature Secondary Structure MHNDGNVVPLHKATTDQATHSPLARLPVILLQVRDKAAQRLRNGLQELFDNADDTLFEMA CCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DRARNDVEQNIFFEAMRDLRLKRKNIERGFLEQFFEAFVGLTQFDPVPTVLSHALQHEDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC TVRTDDMERNVAVETMVGRVLNRDGFALDQLTTRFNALLGKTLDDHYNPLGPAMLCEYFL CEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QAGRNLGVEIKVKLILLKLFERYVLADTDQLYAEANQLLIATGVLPELKPAPARRAIDQA HCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHH VASVQGEFEGVDKTQTDAGVQEVFAALQELLLHVRGTVAPTLEPSAPAQPISTRDLLRLL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH SHLQQYVPALAVQDDFDLRHQLEQLLTRVSVRSGKSRIVGGADEDVINLVAMVFDCILDD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC RNLPDSLKALIARLQIPMLKVAVIDKSFFSRSSHPARRLLNEIAEAAMGWGECDGNARDS CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH LYLRIEQVVQRLLADFVDDPAIFSELLADFLAFTSDERRRSELLEQRLRDAEEGRAKTEL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHH ARQRVEQALNQALLGKVLPPSVVTFVQEAWSKVLLLTCLKHGDQSAEWHADVQTMEQLIW HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SVQRHDDAEAGLRLLALVPGLLKSLRDGLSTSAFDPFATSGFFSELEALHVRLLEPSSAP HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC DQSVLPEMIEVSQTIVLQMADDGLKPRTPARLPADDAGLRQVDQLRLGSWVAFEEDEEHT CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCHH LRCKLAAIIEATGKYVFVDRTGMKVLERERTELALAFRRGAVRTLDDTLLFDRALESVLG HHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH NLRRLNRGK HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA