Click here to switch to the map view.

The map label for this gene is rimP [H]

Identifier: 77457004

GI number: 77457004

Start: 911662

End: 912183

Strand: Direct

Name: rimP [H]

Synonym: Pfl01_0777

Alternate gene names: 77457004

Gene position: 911662-912183 (Clockwise)

Preceding gene: 77457003

Following gene: 77457005

Centisome position: 14.16

GC content: 51.92

Gene sequence:

>522_bases
ATGGGCGTTTCGCCCATTTTTTTATTTTGCATAGCATGCACATACATGCACGAGGGGGTTCAGGTGTCGAGCAAGCTAGA
AGAGTTGCAGGCCTTGTTGGCCCCGGTGGTCGTGGCCCTAGGCTATGAATGCTGGGGTATTGAGTTTTCGGCTCAAGGTC
GCCACTCAATGTTGCGCGTTTATATCGATAAGGAAGGCGGCGTACTGGTGGACGATTGCGCCATCGTCAGCCGTCAGATC
AGCGGTGTGCTGGATGTTGAAGATCCGATTTCCGTTGAATACACCCTTGAAGTTTCCTCGCCAGGCATGGAACGCCCACT
GTTCACTCTTGAGCAGTTTGCCAAATATGTCGGTGAACAAGTGAAGATCAAGCTGCGCTCGCCTTTTGAAGGTCGACGCA
ACTTTCAGGGCCTTCTGCGCGGTGTAGAAGAGCAGGACGTCGTGGTGCAGGTGGAAAACCATGAGTTCCTGTTGCCGATC
GATATGATCGACAAGGCCAACATTATTCCCAGTTTTGACTGA

Upstream 100 bases:

>100_bases
GGTTCAAATCCGGCCCCCGCAACCAGTTTAAGGAGCCCCTTTTAAGGGGCTTTTTGTTAGCTGGACACTTTCAACGCCGC
TGTTCGACGGCGTTTCAAGG

Downstream 100 bases:

>100_bases
GACGCGGATCCCGCGGATCCAATGGCTTGCGAAAGGCGAGGCGTACGATGAGCAAAGAAGTACTGCTGGTTGTTGAGTCG
GTATCCAATGAAAAGGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MGVSPIFLFCIACTYMHEGVQVSSKLEELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKEGGVLVDDCAIVSRQI
SGVLDVEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKLRSPFEGRRNFQGLLRGVEEQDVVVQVENHEFLLPI
DMIDKANIIPSFD

Sequences:

>Translated_173_residues
MGVSPIFLFCIACTYMHEGVQVSSKLEELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKEGGVLVDDCAIVSRQI
SGVLDVEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKLRSPFEGRRNFQGLLRGVEEQDVVVQVENHEFLLPI
DMIDKANIIPSFD
>Mature_172_residues
GVSPIFLFCIACTYMHEGVQVSSKLEELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKEGGVLVDDCAIVSRQIS
GVLDVEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKLRSPFEGRRNFQGLLRGVEEQDVVVQVENHEFLLPID
MIDKANIIPSFD

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=49.0066225165563, Blast_Score=151, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 19369; Mature: 19237

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSPIFLFCIACTYMHEGVQVSSKLEELQALLAPVVVALGYECWGIEFSAQGRHSMLRV
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCEEECCCCCCEEEEE
YIDKEGGVLVDDCAIVSRQISGVLDVEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQ
EEECCCCEEEHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCE
VKIKLRSPFEGRRNFQGLLRGVEEQDVVVQVENHEFLLPIDMIDKANIIPSFD
EEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
GVSPIFLFCIACTYMHEGVQVSSKLEELQALLAPVVVALGYECWGIEFSAQGRHSMLRV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCEEECCCCCCEEEEE
YIDKEGGVLVDDCAIVSRQISGVLDVEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQ
EEECCCCEEEHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCE
VKIKLRSPFEGRRNFQGLLRGVEEQDVVVQVENHEFLLPIDMIDKANIIPSFD
EEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA