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The map label for this gene is ywcH [H]

Identifier: 77456931

GI number: 77456931

Start: 831185

End: 832321

Strand: Reverse

Name: ywcH [H]

Synonym: Pfl01_0703

Alternate gene names: 77456931

Gene position: 832321-831185 (Counterclockwise)

Preceding gene: 77456939

Following gene: 77456925

Centisome position: 12.93

GC content: 62.62

Gene sequence:

>1137_bases
ATGCAATTCGGGATCTACACCGTTGGCGACGTCACACAAGACCCTACCAACGCCCGTACCCCCAGCGAATCCGAGCGCAT
CCAGGCCACCCTGCAAATTGCGCAGAAGGCCGAAGACATCGGACTGGACGTGTTCGCCACCGGCGAGCACCACAATCCCC
CGTTCATCACCTCCTCTCCCACCACACTGCTGGCCTACATCGCCGCCAAGACCCAACGCATCATTCTTTCGACGTCCACC
ACCCTGATCAGCACCAACGACCCGGTACGCCTGGCCGAAGAATATTCGCTGTTGCAGAACCTCTGCGGCGGCCGCATGGA
CCTGATGCTCGGCCGGGGCAACACCGCGCCGGTCTATCCCTGGTTCGGCAAAAGCATCGCCGACGGCCTGCCACTGGCGA
TGGAAAACTATCGCCTGCTGCACCGGCTCTGGCGCGAAGAAGACCTCAACTGGAGCGGACGCTTTCGCACCCCGCTGAAA
AATTTCACCTCGATCCCGCGGCCCCTCGATGACCTGCCGCCCTTCGTCTGGCACGGCTCGATCCGCACCCCGGAAATCGC
CGAGCAGGCGGCGTATTACGGCGACGGTTTTTTCGCCAGCCACATCCTCTGGCCCCGTGAGCATTTCATGGCGCTGGTCG
AGTTCTACCGCGCGCGGTTTGCCCATTACGGTCACGGCACGCCGGAGCAGGCGATTGTCGGTCTCGGCGGGCACATTTTC
ATGCGCCGCAACTCGCAGGATGCGCGCCGGGAGTTCCGTCCCTATTTCGACAACGCCCCGGTGTACGGCCATGGCCCGTC
CCTGGAAGAGTTCATGGAAATGACCCCGCTGGCCGTCGGCAGCCCTCAGGAAATCATCGACAAAACCCTGACCTTCCGCG
AGTACTTCGGCGACTATCAGCGCCAGCTGTTCCTGTTCGACCATGGCGGCATTCCGCTGAAAACCGTGCTGGAACAACTC
GACATGTTCGGCAAGGAAGTCTTGCCGGTGCTGCGTGAAGAAACCCGCAAACGCCGCTCGCCGCTGGCGGCCGAAGCGCC
GACCCACGCCAATCGCCTGGCCCGTTTGCAAATTCCGTCGGCCGATCCACGCGCTACGGTCAAAGCTGCCGAACTCGACA
GCGTGACCGGCCACTGA

Upstream 100 bases:

>100_bases
TGCGATTGTACGTGTACAGGCGTACATTTCAAGTGCCGCGACGATTCATTCTTCGCGGCAAGGGTTTCAAACACACCTTT
ACCCAAGGCAAGGAGGCTTT

Downstream 100 bases:

>100_bases
CCCTGTGGGAGCGAGCAGGCTCGCTCCCACACTTGATCAGGCAGCGCCTTTCAACGGGCGCTGCGCATCCATCGCCACCA
CCACATCATCGTGGATCAAA

Product: luciferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MQFGIYTVGDVTQDPTNARTPSESERIQATLQIAQKAEDIGLDVFATGEHHNPPFITSSPTTLLAYIAAKTQRIILSTST
TLISTNDPVRLAEEYSLLQNLCGGRMDLMLGRGNTAPVYPWFGKSIADGLPLAMENYRLLHRLWREEDLNWSGRFRTPLK
NFTSIPRPLDDLPPFVWHGSIRTPEIAEQAAYYGDGFFASHILWPREHFMALVEFYRARFAHYGHGTPEQAIVGLGGHIF
MRRNSQDARREFRPYFDNAPVYGHGPSLEEFMEMTPLAVGSPQEIIDKTLTFREYFGDYQRQLFLFDHGGIPLKTVLEQL
DMFGKEVLPVLREETRKRRSPLAAEAPTHANRLARLQIPSADPRATVKAAELDSVTGH

Sequences:

>Translated_378_residues
MQFGIYTVGDVTQDPTNARTPSESERIQATLQIAQKAEDIGLDVFATGEHHNPPFITSSPTTLLAYIAAKTQRIILSTST
TLISTNDPVRLAEEYSLLQNLCGGRMDLMLGRGNTAPVYPWFGKSIADGLPLAMENYRLLHRLWREEDLNWSGRFRTPLK
NFTSIPRPLDDLPPFVWHGSIRTPEIAEQAAYYGDGFFASHILWPREHFMALVEFYRARFAHYGHGTPEQAIVGLGGHIF
MRRNSQDARREFRPYFDNAPVYGHGPSLEEFMEMTPLAVGSPQEIIDKTLTFREYFGDYQRQLFLFDHGGIPLKTVLEQL
DMFGKEVLPVLREETRKRRSPLAAEAPTHANRLARLQIPSADPRATVKAAELDSVTGH
>Mature_378_residues
MQFGIYTVGDVTQDPTNARTPSESERIQATLQIAQKAEDIGLDVFATGEHHNPPFITSSPTTLLAYIAAKTQRIILSTST
TLISTNDPVRLAEEYSLLQNLCGGRMDLMLGRGNTAPVYPWFGKSIADGLPLAMENYRLLHRLWREEDLNWSGRFRTPLK
NFTSIPRPLDDLPPFVWHGSIRTPEIAEQAAYYGDGFFASHILWPREHFMALVEFYRARFAHYGHGTPEQAIVGLGGHIF
MRRNSQDARREFRPYFDNAPVYGHGPSLEEFMEMTPLAVGSPQEIIDKTLTFREYFGDYQRQLFLFDHGGIPLKTVLEQL
DMFGKEVLPVLREETRKRRSPLAAEAPTHANRLARLQIPSADPRATVKAAELDSVTGH

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 42757; Mature: 42757

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFGIYTVGDVTQDPTNARTPSESERIQATLQIAQKAEDIGLDVFATGEHHNPPFITSSP
CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEECCCH
TTLLAYIAAKTQRIILSTSTTLISTNDPVRLAEEYSLLQNLCGGRMDLMLGRGNTAPVYP
HHHHHHHHHHCCEEEEEECEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
WFGKSIADGLPLAMENYRLLHRLWREEDLNWSGRFRTPLKNFTSIPRPLDDLPPFVWHGS
CCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHCCCCEEECC
IRTPEIAEQAAYYGDGFFASHILWPREHFMALVEFYRARFAHYGHGTPEQAIVGLGGHIF
CCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCEEE
MRRNSQDARREFRPYFDNAPVYGHGPSLEEFMEMTPLAVGSPQEIIDKTLTFREYFGDYQ
EECCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHH
RQLFLFDHGGIPLKTVLEQLDMFGKEVLPVLREETRKRRSPLAAEAPTHANRLARLQIPS
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEECCC
ADPRATVKAAELDSVTGH
CCCCCEEEHHHCCCCCCC
>Mature Secondary Structure
MQFGIYTVGDVTQDPTNARTPSESERIQATLQIAQKAEDIGLDVFATGEHHNPPFITSSP
CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEECCCH
TTLLAYIAAKTQRIILSTSTTLISTNDPVRLAEEYSLLQNLCGGRMDLMLGRGNTAPVYP
HHHHHHHHHHCCEEEEEECEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
WFGKSIADGLPLAMENYRLLHRLWREEDLNWSGRFRTPLKNFTSIPRPLDDLPPFVWHGS
CCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHCCCCEEECC
IRTPEIAEQAAYYGDGFFASHILWPREHFMALVEFYRARFAHYGHGTPEQAIVGLGGHIF
CCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCEEE
MRRNSQDARREFRPYFDNAPVYGHGPSLEEFMEMTPLAVGSPQEIIDKTLTFREYFGDYQ
EECCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHH
RQLFLFDHGGIPLKTVLEQLDMFGKEVLPVLREETRKRRSPLAAEAPTHANRLARLQIPS
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEECCC
ADPRATVKAAELDSVTGH
CCCCCEEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]