| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456925
Identifier: 77456925
GI number: 77456925
Start: 823715
End: 824059
Strand: Reverse
Name: 77456925
Synonym: Pfl01_0697
Alternate gene names: NA
Gene position: 824059-823715 (Counterclockwise)
Preceding gene: 77456931
Following gene: 77456922
Centisome position: 12.8
GC content: 60.0
Gene sequence:
>345_bases ATGCCCGCACCTATCACCGTTCTGCGCGACACACATCCCCTGCCCGTACTCGACGCCTGCAAATGGGAAAAACTCGAGGG CGACCCGCACACCGTCAACCTCAACGCCTATACCAGCGAAGACGGCAGCAAGATCATGGGCACGTGGATCTGCACGCCGG GCAAGTGGCGGGTGGATTACGTGAAGTGGGAGTACTGCCATTTCCAGGAAGGCTACTGCGTGATTACCCCGGACGGCATG GAGCCGATCCATCTGCGCGCCGGCGACATCTTCGTGGTCGAGCCAGGCATGAAGGGCACCTGGGAAGTGGTTGAGACCGT GCGCAAATATTTCGTGTTCGCCTGA
Upstream 100 bases:
>100_bases CCCCAGCGCTTACAGGCATCTGGAGGTCGACCCCAGACACTTCGACAGCCCCCACGAACGCTACGGTGACGGCTCTATTT CCCTCTGGCCTGGAGCCGTC
Downstream 100 bases:
>100_bases TACAAAAAAGCCGGGAAACCACCCGACGTGATTTCCCGGCAACACCTACTGCATCTGAATTGCAGACCTGCGACGAGCAC AGGCCTGACGACGATTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MPAPITVLRDTHPLPVLDACKWEKLEGDPHTVNLNAYTSEDGSKIMGTWICTPGKWRVDYVKWEYCHFQEGYCVITPDGM EPIHLRAGDIFVVEPGMKGTWEVVETVRKYFVFA
Sequences:
>Translated_114_residues MPAPITVLRDTHPLPVLDACKWEKLEGDPHTVNLNAYTSEDGSKIMGTWICTPGKWRVDYVKWEYCHFQEGYCVITPDGM EPIHLRAGDIFVVEPGMKGTWEVVETVRKYFVFA >Mature_113_residues PAPITVLRDTHPLPVLDACKWEKLEGDPHTVNLNAYTSEDGSKIMGTWICTPGKWRVDYVKWEYCHFQEGYCVITPDGME PIHLRAGDIFVVEPGMKGTWEVVETVRKYFVFA
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13060; Mature: 12929
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPITVLRDTHPLPVLDACKWEKLEGDPHTVNLNAYTSEDGSKIMGTWICTPGKWRVDY CCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEE VKWEYCHFQEGYCVITPDGMEPIHLRAGDIFVVEPGMKGTWEVVETVRKYFVFA EEEEEEEECCCEEEECCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHEECC >Mature Secondary Structure PAPITVLRDTHPLPVLDACKWEKLEGDPHTVNLNAYTSEDGSKIMGTWICTPGKWRVDY CCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEE VKWEYCHFQEGYCVITPDGMEPIHLRAGDIFVVEPGMKGTWEVVETVRKYFVFA EEEEEEEECCCEEEECCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA