| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yigZ [C]
Identifier: 77456910
GI number: 77456910
Start: 797079
End: 797660
Strand: Reverse
Name: yigZ [C]
Synonym: Pfl01_0682
Alternate gene names: 77456910
Gene position: 797660-797079 (Counterclockwise)
Preceding gene: 77456911
Following gene: 77456909
Centisome position: 12.39
GC content: 63.75
Gene sequence:
>582_bases ATGCCATTCACCCTCAGCGGCTTTTGCGAATTCCGCGAAGAGATTCGCAAAAGCCGCTTCATCACCTTCGCCGCGCCGAT CACCAGCCCCGCTGAGGCGCAAGCCTTCATCGAGCAGCACAGCGACTTGAACGCTTCGCACAATTGCTGGGCGTGGAAAC TCGGCGATCAGTACCGCAGCAACGACGACGGCGAACCCGGTGGCAGTGCCGGGCGGCCGATCCTCGCAGCCATCGAAGCG CAGGACTGCGATCAGGTCGCGGTGCTGGTGATCCGCTGGTACGGCGGCATTCAGCTGGGCACCGGCGGCCTGGCCCGGGC CTATGGCGGCGGCGCCAACAAGTGCCTGCAAGCCGCGCCGAAGATCGAGTTGATCAGCCGCGTGCCCGTGCATTGCGCCT GCGCCTTTGGCGAACTGGCGCTGGTGAAGCTGCGGGTCGCGGATCTGGGCGGATTGGTGATCGAAGAAAACTTCACCGCC AATGGTGTCGAGCTGCAACTGGCCGTGAGCGAAGCGCACATCGAGCTGTTGCAAAACCAGTTGGCCGATCTGAGCCGTGG GCGCATCCTGCTGCAACGTTGA
Upstream 100 bases:
>100_bases GCAGCAAGTTGACCAAACAGGATATGGAAGACGCCGGCAACAACCTGATCCGCATCATCCTCAAAGGCTGCGGCCTCACT TCTTCTATATAAGTCGTTTT
Downstream 100 bases:
>100_bases AGCCCCGCCATGTTTTAGGGCACAAGCCGATTTGCTTATACACGTGACTTGCCCACATCCGCTGTGCACCCGGCTGTGGA TAACCTGAGCACAGGAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPFTLSGFCEFREEIRKSRFITFAAPITSPAEAQAFIEQHSDLNASHNCWAWKLGDQYRSNDDGEPGGSAGRPILAAIEA QDCDQVAVLVIRWYGGIQLGTGGLARAYGGGANKCLQAAPKIELISRVPVHCACAFGELALVKLRVADLGGLVIEENFTA NGVELQLAVSEAHIELLQNQLADLSRGRILLQR
Sequences:
>Translated_193_residues MPFTLSGFCEFREEIRKSRFITFAAPITSPAEAQAFIEQHSDLNASHNCWAWKLGDQYRSNDDGEPGGSAGRPILAAIEA QDCDQVAVLVIRWYGGIQLGTGGLARAYGGGANKCLQAAPKIELISRVPVHCACAFGELALVKLRVADLGGLVIEENFTA NGVELQLAVSEAHIELLQNQLADLSRGRILLQR >Mature_192_residues PFTLSGFCEFREEIRKSRFITFAAPITSPAEAQAFIEQHSDLNASHNCWAWKLGDQYRSNDDGEPGGSAGRPILAAIEAQ DCDQVAVLVIRWYGGIQLGTGGLARAYGGGANKCLQAAPKIELISRVPVHCACAFGELALVKLRVADLGGLVIEENFTAN GVELQLAVSEAHIELLQNQLADLSRGRILLQR
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=188, Percent_Identity=36.7021276595745, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 20863; Mature: 20732
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTLSGFCEFREEIRKSRFITFAAPITSPAEAQAFIEQHSDLNASHNCWAWKLGDQYRS CCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCC NDDGEPGGSAGRPILAAIEAQDCDQVAVLVIRWYGGIQLGTGGLARAYGGGANKCLQAAP CCCCCCCCCCCCCEEEEECCCCCCHHEEEEEEECCCEEECCCCHHHHCCCCHHHHHHHCC KIELISRVPVHCACAFGELALVKLRVADLGGLVIEENFTANGVELQLAVSEAHIELLQNQ CHHHHHCCCHHEEEHHCCEEEEEEEEECCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHH LADLSRGRILLQR HHHHHCCEEEECC >Mature Secondary Structure PFTLSGFCEFREEIRKSRFITFAAPITSPAEAQAFIEQHSDLNASHNCWAWKLGDQYRS CCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCC NDDGEPGGSAGRPILAAIEAQDCDQVAVLVIRWYGGIQLGTGGLARAYGGGANKCLQAAP CCCCCCCCCCCCCEEEEECCCCCCHHEEEEEEECCCEEECCCCHHHHCCCCHHHHHHHCC KIELISRVPVHCACAFGELALVKLRVADLGGLVIEENFTANGVELQLAVSEAHIELLQNQ CHHHHHCCCHHEEEHHCCEEEEEEEEECCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHH LADLSRGRILLQR HHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]