| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456875
Identifier: 77456875
GI number: 77456875
Start: 757865
End: 759055
Strand: Reverse
Name: 77456875
Synonym: Pfl01_0647
Alternate gene names: NA
Gene position: 759055-757865 (Counterclockwise)
Preceding gene: 77456876
Following gene: 77456874
Centisome position: 11.79
GC content: 64.9
Gene sequence:
>1191_bases ATGAGCCAGAGCCTGAGCCAGACCTTTCTCGCCATCACCCGCAACACCACCGATCTCGAGTGGCTGCAAGGCGCGCTGGC GCCGCTGGGCCAGGTGGTCAGCGCCGGTGGCGGCAGCCTCGACGAACTGCTGGCGCTGGTCGACGTGACCTTCGCCAGCC TGGTGTTCGTCGGCCTCGACCGTGAACATCTGGTGGCCCAGAGTGCGTTGATCGAAGGCGTGCTCGAAGCCAAGCCGATG CTGGCGATCGTCGCCCTCGGTGACGGCATGGACAATCAATTGGTGCTCAACGCGATGCGCGCCGGTGCCCGGGATTTCGT GGCCTACGGCTCGCGCTCCAGCGAAGTCGCCGGGCTGGTGCGACGGCTGAGCAAACGCCTGCCGGCGGTGACGCCGAACG CCCAGCTCGGCGGATTGACGGTTCTGTACAGCATTCAGAACAACGCCGACGGTGCGCTGCTGGCCAATCACATGGCGCTG GTGGTGCAGAAGAGCGGCCAGCAGACCTTGCTGCTTGACCTTGGCCTGCCGCGCGGCGACAGCCTGGCCCTGCTGGGGCT GGAGAGTTCGTTTCATTTCGGCGATGCGTTACGTCATTTGCGTCGCCTCGACGCAACGCTGATCGACAGCGCCTTCACCA GTGCCGAGGCCGGGTTGCGCATTCTCGCCTATGCCCCCGGCGACGAACCGCTGGAACGCACCAGCGCTGCCGAGCTGTAC ATGTTGCTCAGCGCCCTGCGCCAGCACTTCCAGCACATCGTGGTGAACCTCACCGGCCAGCCCGACAGCGAAGCGCTGCG CACCTTCGTCAGCCATTGCGACAAGCTGCTGTGGTACACCGACCAGAACGTCCTCGACTGCCGACGCAACCTCGCAGTGC TCAATCTGTGGCGCGAAAAAGGCATGAAGCTTGATCACGGCCGGCTGCTGGTGGATCGCTACCTGCGCAATGTCGCGCCG GACTCCGACACCCTCGGCAGGACCTTCGGCCTGGAAGTCATCGCAGTGCTGGCCTACAGCCCGGAAGTGCGCCTGAATGC CAAGAACCAGGGCGTGACCCTGTTCGAACTCGCCCCGCGCGAAGCCATCAGCCAGAGTCTGCGCACCCTCGGCGAACGAC TGGCCAAGCGCTCCGAAGGCCTGGCCAAACCCAAAGTCACCTGGTTCGATCGCTTGCGAGGCAGCTCATGA
Upstream 100 bases:
>100_bases CGTCGTTGCCCGGCGAGAAACTGCGCAATTACGACCCGAACTGGTATCGCCTGTACTTCCTGGAAAACGGCAACTTCGAT AAACGCAGCGGGTTATCGCA
Downstream 100 bases:
>100_bases GCAGCGAGCAATTGTTTGGCGGGCCGCAGCGCAACGCCACCGGCAACACCGACCACGACGGCCTGAAACTGGTGCTGCAC CGCTACATCATCGACGCCAT
Product: pilus assembly protein CpaE
Products: NA
Alternate protein names: Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Response Regulator Receiver Domain-Containing Protein; Pilus Assembly Protein; Response Receiver Involved In Pilum Assembly; Flp Pilus Assembly ATPase; Flp Pilus Assembly Protein ATPase CpaE; Response Regulator Receiver Domain Protein; Fimbriae Assembly Protein; Response Regulator; Flp Pilus Assembly Protein ATPase CpaE-Like; Pilus Assembly Protein CpaE-Like Protein; Flp Pilus Assembly Protein; Pilus Assembly Protein CpaE-Like; Flp Pilus Assembly Protein ATPase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSQSLSQTFLAITRNTTDLEWLQGALAPLGQVVSAGGGSLDELLALVDVTFASLVFVGLDREHLVAQSALIEGVLEAKPM LAIVALGDGMDNQLVLNAMRAGARDFVAYGSRSSEVAGLVRRLSKRLPAVTPNAQLGGLTVLYSIQNNADGALLANHMAL VVQKSGQQTLLLDLGLPRGDSLALLGLESSFHFGDALRHLRRLDATLIDSAFTSAEAGLRILAYAPGDEPLERTSAAELY MLLSALRQHFQHIVVNLTGQPDSEALRTFVSHCDKLLWYTDQNVLDCRRNLAVLNLWREKGMKLDHGRLLVDRYLRNVAP DSDTLGRTFGLEVIAVLAYSPEVRLNAKNQGVTLFELAPREAISQSLRTLGERLAKRSEGLAKPKVTWFDRLRGSS
Sequences:
>Translated_396_residues MSQSLSQTFLAITRNTTDLEWLQGALAPLGQVVSAGGGSLDELLALVDVTFASLVFVGLDREHLVAQSALIEGVLEAKPM LAIVALGDGMDNQLVLNAMRAGARDFVAYGSRSSEVAGLVRRLSKRLPAVTPNAQLGGLTVLYSIQNNADGALLANHMAL VVQKSGQQTLLLDLGLPRGDSLALLGLESSFHFGDALRHLRRLDATLIDSAFTSAEAGLRILAYAPGDEPLERTSAAELY MLLSALRQHFQHIVVNLTGQPDSEALRTFVSHCDKLLWYTDQNVLDCRRNLAVLNLWREKGMKLDHGRLLVDRYLRNVAP DSDTLGRTFGLEVIAVLAYSPEVRLNAKNQGVTLFELAPREAISQSLRTLGERLAKRSEGLAKPKVTWFDRLRGSS >Mature_395_residues SQSLSQTFLAITRNTTDLEWLQGALAPLGQVVSAGGGSLDELLALVDVTFASLVFVGLDREHLVAQSALIEGVLEAKPML AIVALGDGMDNQLVLNAMRAGARDFVAYGSRSSEVAGLVRRLSKRLPAVTPNAQLGGLTVLYSIQNNADGALLANHMALV VQKSGQQTLLLDLGLPRGDSLALLGLESSFHFGDALRHLRRLDATLIDSAFTSAEAGLRILAYAPGDEPLERTSAAELYM LLSALRQHFQHIVVNLTGQPDSEALRTFVSHCDKLLWYTDQNVLDCRRNLAVLNLWREKGMKLDHGRLLVDRYLRNVAPD SDTLGRTFGLEVIAVLAYSPEVRLNAKNQGVTLFELAPREAISQSLRTLGERLAKRSEGLAKPKVTWFDRLRGSS
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43101; Mature: 42970
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLSQTFLAITRNTTDLEWLQGALAPLGQVVSAGGGSLDELLALVDVTFASLVFVGLD CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC REHLVAQSALIEGVLEAKPMLAIVALGDGMDNQLVLNAMRAGARDFVAYGSRSSEVAGLV HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHH RRLSKRLPAVTPNAQLGGLTVLYSIQNNADGALLANHMALVVQKSGQQTLLLDLGLPRGD HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHEEEEECCCCEEEEEEECCCCCC SLALLGLESSFHFGDALRHLRRLDATLIDSAFTSAEAGLRILAYAPGDEPLERTSAAELY CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH MLLSALRQHFQHIVVNLTGQPDSEALRTFVSHCDKLLWYTDQNVLDCRRNLAVLNLWREK HHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHC GMKLDHGRLLVDRYLRNVAPDSDTLGRTFGLEVIAVLAYSPEVRLNAKNQGVTLFELAPR CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCH EAISQSLRTLGERLAKRSEGLAKPKVTWFDRLRGSS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC >Mature Secondary Structure SQSLSQTFLAITRNTTDLEWLQGALAPLGQVVSAGGGSLDELLALVDVTFASLVFVGLD CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC REHLVAQSALIEGVLEAKPMLAIVALGDGMDNQLVLNAMRAGARDFVAYGSRSSEVAGLV HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHH RRLSKRLPAVTPNAQLGGLTVLYSIQNNADGALLANHMALVVQKSGQQTLLLDLGLPRGD HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHEEEEECCCCEEEEEEECCCCCC SLALLGLESSFHFGDALRHLRRLDATLIDSAFTSAEAGLRILAYAPGDEPLERTSAAELY CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH MLLSALRQHFQHIVVNLTGQPDSEALRTFVSHCDKLLWYTDQNVLDCRRNLAVLNLWREK HHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHC GMKLDHGRLLVDRYLRNVAPDSDTLGRTFGLEVIAVLAYSPEVRLNAKNQGVTLFELAPR CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCH EAISQSLRTLGERLAKRSEGLAKPKVTWFDRLRGSS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA