Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is aroK [H]
Identifier: 77456638
GI number: 77456638
Start: 466551
End: 467069
Strand: Direct
Name: aroK [H]
Synonym: Pfl01_0410
Alternate gene names: 77456638
Gene position: 466551-467069 (Clockwise)
Preceding gene: 77456637
Following gene: 77456639
Centisome position: 7.25
GC content: 63.39
Gene sequence:
>519_bases GTGCGAAATTTGATTCTTGTAGGACCGATGGGGGCTGGAAAAAGCACCATCGGCCGATTACTGGCCAAAGAGCTGCGCCT GCCGTTCAAGGATTCCGACAAGGAAATTGAACTGCGTACGGGCGCCAATATCCCGTGGATCTTCGACAAGGAAGGCGAGC CCGGCTTTCGTGACCGTGAGCAAGCGATGATCGCCGAGCTGTGCGCGTTCGACGGCGTGGTGCTGGCGACCGGCGGCGGC GCGGTGATGCGCGATGCCAACCGCAAGGCCCTGCACGAGGGCGGGCGGGTGGTGTATCTGCACGCCTCCGTCGAGCAGCA GGTCGGACGCACCTCTCGCGACCGCAACCGGCCGTTGCTGCGCACCGCCAATCCGGAGAAAACTCTGCGCGACCTGCTGG CGATCCGTGATCCGCTCTATCGGGAAATCGCCGATCTGGTGGTAGAAACCGACGAGCGGCCACCGCGCATGGTCGTGCTC GATATTCTCGACCGCCTGGCGCAGCTTCCGCCCCGTTAA
Upstream 100 bases:
>100_bases TTCCGGCGTGATGTGGTTTCGGAGAAAAAATCCGAGCTGCTGGTATTTCTCACTCCGCGTATCATGAATAACCAGGCGAT TGCTGTGAGTCGTTGATTCT
Downstream 100 bases:
>100_bases AGCATCGCTCGAAATGCGCTATCCTCGGCGTCCTGTTACAGCCCGCCGAGGTTGTGGCGGATGGCGAGCGAGCGGCGTCA TACCCGCTATAGGCCGCAGA
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRNLILVGPMGAGKSTIGRLLAKELRLPFKDSDKEIELRTGANIPWIFDKEGEPGFRDREQAMIAELCAFDGVVLATGGG AVMRDANRKALHEGGRVVYLHASVEQQVGRTSRDRNRPLLRTANPEKTLRDLLAIRDPLYREIADLVVETDERPPRMVVL DILDRLAQLPPR
Sequences:
>Translated_172_residues MRNLILVGPMGAGKSTIGRLLAKELRLPFKDSDKEIELRTGANIPWIFDKEGEPGFRDREQAMIAELCAFDGVVLATGGG AVMRDANRKALHEGGRVVYLHASVEQQVGRTSRDRNRPLLRTANPEKTLRDLLAIRDPLYREIADLVVETDERPPRMVVL DILDRLAQLPPR >Mature_172_residues MRNLILVGPMGAGKSTIGRLLAKELRLPFKDSDKEIELRTGANIPWIFDKEGEPGFRDREQAMIAELCAFDGVVLATGGG AVMRDANRKALHEGGRVVYLHASVEQQVGRTSRDRNRPLLRTANPEKTLRDLLAIRDPLYREIADLVVETDERPPRMVVL DILDRLAQLPPR
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=166, Percent_Identity=52.4096385542169, Blast_Score=174, Evalue=3e-45, Organism=Escherichia coli, GI1786587, Length=168, Percent_Identity=34.5238095238095, Blast_Score=93, Evalue=1e-20,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 19275; Mature: 19275
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLILVGPMGAGKSTIGRLLAKELRLPFKDSDKEIELRTGANIPWIFDKEGEPGFRDRE CCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCHHH QAMIAELCAFDGVVLATGGGAVMRDANRKALHEGGRVVYLHASVEQQVGRTSRDRNRPLL HHHHHHHHHHCCEEEEECCCCEECCCCHHHHHCCCCEEEEECCHHHHHCCCCCCCCCCCE RTANPEKTLRDLLAIRDPLYREIADLVVETDERPPRMVVLDILDRLAQLPPR ECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MRNLILVGPMGAGKSTIGRLLAKELRLPFKDSDKEIELRTGANIPWIFDKEGEPGFRDRE CCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCHHH QAMIAELCAFDGVVLATGGGAVMRDANRKALHEGGRVVYLHASVEQQVGRTSRDRNRPLL HHHHHHHHHHCCEEEEECCCCEECCCCHHHHHCCCCEEEEECCHHHHHCCCCCCCCCCCE RTANPEKTLRDLLAIRDPLYREIADLVVETDERPPRMVVLDILDRLAQLPPR ECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA