Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77456633
Identifier: 77456633
GI number: 77456633
Start: 461682
End: 462746
Strand: Direct
Name: 77456633
Synonym: Pfl01_0405
Alternate gene names: NA
Gene position: 461682-462746 (Clockwise)
Preceding gene: 77456631
Following gene: 77456634
Centisome position: 7.17
GC content: 64.69
Gene sequence:
>1065_bases GTGCTAGGACTCTTCAATAAAAAGGCCAATACGTTACTGGGGATCGACATCAGCTCCACATCGGTCAAGCTGCTGGAGCT GAGCCGTCAGGGTGAGCGCTACCGGGTCGAGGCGTACGCGGTGGAGCCGTTGCCGGCGAACGCCGTGGTCGAAAAGAACA TCGCCGAGCTCGAGGGCGTTGGCCAGGCTCTGTCCCGGGTGCTGGTCAAGGCGCGCACCGGGCTGAAAACCGTGGCGGTG GCGGTGGCTGGATCTGCGGTGATCACCAAGGTCATCGAGATGGACGCCGGGCTGTCCGACGACGAGCTGGAAAACCAGCT CAAGATCGAAGCCGATCAATACATTCCCTATCCGCTGGACGAGGTCGCCATCGACTTCGAAGTCCAGGGCGTTTCGCCGC GCAACCCCGAACGGGTCAACGTGCTGCTGGCCGCCTGTCGCAAGGAAAACGTCGAAGTCCGCGAAGCGGCGCTCGCTCTC GCCGGGCTGACCGCGCGGGTGGTGGATGTAGAGGCGTATGCGCTGGAGCGCTCGTTCGGCCTGCTGGCCACGCAACTGGC CGCGTCCCAGGATCGGTTGACGGTGGCGGTGGTCGACATCGGCGCCACCATGACCACCCTCAGCGTCCTGCACAACGGCC GGATCATCTACACCCGCGAACAACTGTTCGGCGGTCGACAGCTGACCGAGGAAATCCAGCGCCGTTACGGCCTGACCCTT GAGCAGGCGGGGCTCGCCAAAAAGCAGGGCGGCCTGCCGGACGACTACGTCAGTGAGGTGCTGCAGCCATTTCGCGAGGC GCTGGTACAGCAGGTGTCGCGCTCCCTGCAGTTCTTTTTCGCCTCCGGCCAGTACAACGCTGTCGACCACATTCTGCTGG CCGGCGGCACGGCGTCGGTGCCCGGCCTTGACCGGCTGATCGAAGAGCGCCTGCACACCCCGACCCAGGTTGCCAACCCG TTTTCCGACATGGCCTTGAGCAGCAAGGTCAACGCCGGGGCCCTGGCGAGCGATGCGCCGGCCCTGATGATTGCCTGCGG GCTCGCGCTCAGGAGTTTCGACTGA
Upstream 100 bases:
>100_bases TCCGCTGGGGGCGTCATTTGCGCTTCTGTCAAGACGGGGCGAGGGAACGCAATGCGCATTACAGAGTCCGTAACTCACGG AAAGTCATAGGGAATTGGTA
Downstream 100 bases:
>100_bases TGGCGCGGATCAACCTTTTACCCTGGCGCGAGGAGCGTCGCGAAGAACGGCGCAAACGCTTCCTGCTGGCCTTGACCGGT GTGGTGGTCGGTTCGGTGGG
Product: Type IV pilus assembly protein PilM
Products: NA
Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein PilM; Fimbrial Assembly Protein PilM; Type Iv Pilus Assembly Protein Pilm; Tfp Pilus Assembly Protein; Type IV Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Type IV Pili Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Protein FtsA; Type IV Fimbrial Biogenesis Protein PilM; Fimbrial Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Pili Assembly Protein PilM; Type IV Pilus Biogenesis Protein TapM; Type IV Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM; PilM Type IV Pilus Assembly Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein Protein
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MLGLFNKKANTLLGIDISSTSVKLLELSRQGERYRVEAYAVEPLPANAVVEKNIAELEGVGQALSRVLVKARTGLKTVAV AVAGSAVITKVIEMDAGLSDDELENQLKIEADQYIPYPLDEVAIDFEVQGVSPRNPERVNVLLAACRKENVEVREAALAL AGLTARVVDVEAYALERSFGLLATQLAASQDRLTVAVVDIGATMTTLSVLHNGRIIYTREQLFGGRQLTEEIQRRYGLTL EQAGLAKKQGGLPDDYVSEVLQPFREALVQQVSRSLQFFFASGQYNAVDHILLAGGTASVPGLDRLIEERLHTPTQVANP FSDMALSSKVNAGALASDAPALMIACGLALRSFD
Sequences:
>Translated_354_residues MLGLFNKKANTLLGIDISSTSVKLLELSRQGERYRVEAYAVEPLPANAVVEKNIAELEGVGQALSRVLVKARTGLKTVAV AVAGSAVITKVIEMDAGLSDDELENQLKIEADQYIPYPLDEVAIDFEVQGVSPRNPERVNVLLAACRKENVEVREAALAL AGLTARVVDVEAYALERSFGLLATQLAASQDRLTVAVVDIGATMTTLSVLHNGRIIYTREQLFGGRQLTEEIQRRYGLTL EQAGLAKKQGGLPDDYVSEVLQPFREALVQQVSRSLQFFFASGQYNAVDHILLAGGTASVPGLDRLIEERLHTPTQVANP FSDMALSSKVNAGALASDAPALMIACGLALRSFD >Mature_354_residues MLGLFNKKANTLLGIDISSTSVKLLELSRQGERYRVEAYAVEPLPANAVVEKNIAELEGVGQALSRVLVKARTGLKTVAV AVAGSAVITKVIEMDAGLSDDELENQLKIEADQYIPYPLDEVAIDFEVQGVSPRNPERVNVLLAACRKENVEVREAALAL AGLTARVVDVEAYALERSFGLLATQLAASQDRLTVAVVDIGATMTTLSVLHNGRIIYTREQLFGGRQLTEEIQRRYGLTL EQAGLAKKQGGLPDDYVSEVLQPFREALVQQVSRSLQFFFASGQYNAVDHILLAGGTASVPGLDRLIEERLHTPTQVANP FSDMALSSKVNAGALASDAPALMIACGLALRSFD
Specific function: Unknown
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38148; Mature: 38148
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLFNKKANTLLGIDISSTSVKLLELSRQGERYRVEAYAVEPLPANAVVEKNIAELEGV CCCCCCCCCCEEEEEEECCCCEEEHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH GQALSRVLVKARTGLKTVAVAVAGSAVITKVIEMDAGLSDDELENQLKIEADQYIPYPLD HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEECCCCCCCCHH EVAIDFEVQGVSPRNPERVNVLLAACRKENVEVREAALALAGLTARVVDVEAYALERSFG HEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHEEEEHHHHHHHHHHH LLATQLAASQDRLTVAVVDIGATMTTLSVLHNGRIIYTREQLFGGRQLTEEIQRRYGLTL HHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCEEEEEHHHHHCCHHHHHHHHHHHCCCH EQAGLAKKQGGLPDDYVSEVLQPFREALVQQVSRSLQFFFASGQYNAVDHILLAGGTASV HHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEECCCCCC PGLDRLIEERLHTPTQVANPFSDMALSSKVNAGALASDAPALMIACGLALRSFD CHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLGLFNKKANTLLGIDISSTSVKLLELSRQGERYRVEAYAVEPLPANAVVEKNIAELEGV CCCCCCCCCCEEEEEEECCCCEEEHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH GQALSRVLVKARTGLKTVAVAVAGSAVITKVIEMDAGLSDDELENQLKIEADQYIPYPLD HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEECCCCCCCCHH EVAIDFEVQGVSPRNPERVNVLLAACRKENVEVREAALALAGLTARVVDVEAYALERSFG HEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHEEEEHHHHHHHHHHH LLATQLAASQDRLTVAVVDIGATMTTLSVLHNGRIIYTREQLFGGRQLTEEIQRRYGLTL HHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCEEEEEHHHHHCCHHHHHHHHHHHCCCH EQAGLAKKQGGLPDDYVSEVLQPFREALVQQVSRSLQFFFASGQYNAVDHILLAGGTASV HHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEECCCCCC PGLDRLIEERLHTPTQVANPFSDMALSSKVNAGALASDAPALMIACGLALRSFD CHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA