Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is maeB [H]
Identifier: 77456631
GI number: 77456631
Start: 457469
End: 458821
Strand: Direct
Name: maeB [H]
Synonym: Pfl01_0403
Alternate gene names: 77456631
Gene position: 457469-458821 (Clockwise)
Preceding gene: 77456630
Following gene: 77456633
Centisome position: 7.11
GC content: 59.87
Gene sequence:
>1353_bases GTGACCGGGCAGTCTTGTGGGGACTTTGCGAGGCGCGTATCCTCGCTGACCAGTCTGTCCAACAGTAAAAAGCGGAATGC CAAAATGTCTGATCTGAAAACTGCCGCTCTCGAATATCATGCCAATCCTCGTCCAGGAAAGCTGAGTGTCGAGCTCACCA AGGCCACTGCTACCGCCCGCGACCTGTCGCTGGCCTACAGCCCCGGCGTAGCTGAACCAGTGCGCGAGATCGCCCGCGAT CCTGAACTGGCCTACAAGTACACCGGCAAGGGCAACCTGGTTGCAGTCATTTCCGATGGCACCGCGATTCTGGGCCTGGG TAACCTCGGCCCACTGGCTTCCAAGCCAGTCATGGAAGGTAAAGGCGTGCTGTTCAAGCGCTTCGCCGGCATCGACGTCT TCGACATTGAAGTCGACTCCGAGAGCCCGCAAGCCTTCATCGACACCGTAAAACGCATTTCCATCACCTTCGGTGGCATC AACCTGGAAGACATCAAGGCACCTGAGTGCTTTGAGATCGAACGCGCTCTGATCGAGCAGTGCGACATTCCGGTCTTCCA CGATGACCAGCACGGCACCGCGATCGTGACCGCTGCGGGCATGATCAACGCCCTGGAAATCGCGGGCAAAACCCTGGCCG ACGCCAAGATCGTCTGCCTGGGCGCTGGCGCCGCCGCCATCTCCTGCATGAAATTGCTGGTGAGCATGGGCGCCAAGGTC GAAAACATCTTCATGGTTGACCGTACCGGCGTGATCCACGCTGGCCGTGACGACCTGAACCAGTACAAGGCTGTGTTCGC TCACCCTACCGAGAAACGCACCCTGGACGACGCCATCGAAGGTGCTGACGTATTCGTCGGCCTGTCGGGTCCAAACCTGC TGAGCGCCGAGCAACTCAAGCGCATGGCAGCCAACCCGATCGTCTTCGCCTGCTCCAACCCGGATCCGGAAATCTCCCCG GAACTGGCTCATGCCACCCGTAACGACGTGATCATGGCCACCGGCCGTTCGGACTACCCGAACCAGGTCAACAACGTGCT GGGCTTCCCGTTCATCTTCCGTGGTGCCCTGGACGTTCGCGCCAAGCGCATCAACGAAGAAATGAAGATCGCTGCCGCCA ACGCCCTGCGCGAACTGGCCAAGCTGCCGGTCCCGCAGGAAGTCTGCGACGCCTACGGCGGTATCTCCCTGGAATTCGGC CGTGAGTACATCATTCCGAAGCCAATGGACAAACGCCTGATCACCGTGATCTCCGACGCCGTGGCCAAGGCCGCGATCGA GACTGGTGTGGCGACCCTGCCGTATCCGAAGAACTACCCGCTGAAAAGCGTGGATGACGTGTTCAACGGCTAA
Upstream 100 bases:
>100_bases ATAAAAAGTTGTAGACATTTTTTCTGTCGATTGTGAACAGTCTAACCCTTGTGCGCCGTGGCTCTTGGCCCAAAGTCGTA GGGCAGGGCGCTTGACAGGG
Downstream 100 bases:
>100_bases GTCGTTGTAGCGCTTCAAGCGAAAGCCCTGACTCGTGAGAGTCGGGGCTTTTTTATGCCTGTTGATTTTGGGGTGATCTT AAGGGCCTCTTCGCGAGCTT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MTGQSCGDFARRVSSLTSLSNSKKRNAKMSDLKTAALEYHANPRPGKLSVELTKATATARDLSLAYSPGVAEPVREIARD PELAYKYTGKGNLVAVISDGTAILGLGNLGPLASKPVMEGKGVLFKRFAGIDVFDIEVDSESPQAFIDTVKRISITFGGI NLEDIKAPECFEIERALIEQCDIPVFHDDQHGTAIVTAAGMINALEIAGKTLADAKIVCLGAGAAAISCMKLLVSMGAKV ENIFMVDRTGVIHAGRDDLNQYKAVFAHPTEKRTLDDAIEGADVFVGLSGPNLLSAEQLKRMAANPIVFACSNPDPEISP ELAHATRNDVIMATGRSDYPNQVNNVLGFPFIFRGALDVRAKRINEEMKIAAANALRELAKLPVPQEVCDAYGGISLEFG REYIIPKPMDKRLITVISDAVAKAAIETGVATLPYPKNYPLKSVDDVFNG
Sequences:
>Translated_450_residues MTGQSCGDFARRVSSLTSLSNSKKRNAKMSDLKTAALEYHANPRPGKLSVELTKATATARDLSLAYSPGVAEPVREIARD PELAYKYTGKGNLVAVISDGTAILGLGNLGPLASKPVMEGKGVLFKRFAGIDVFDIEVDSESPQAFIDTVKRISITFGGI NLEDIKAPECFEIERALIEQCDIPVFHDDQHGTAIVTAAGMINALEIAGKTLADAKIVCLGAGAAAISCMKLLVSMGAKV ENIFMVDRTGVIHAGRDDLNQYKAVFAHPTEKRTLDDAIEGADVFVGLSGPNLLSAEQLKRMAANPIVFACSNPDPEISP ELAHATRNDVIMATGRSDYPNQVNNVLGFPFIFRGALDVRAKRINEEMKIAAANALRELAKLPVPQEVCDAYGGISLEFG REYIIPKPMDKRLITVISDAVAKAAIETGVATLPYPKNYPLKSVDDVFNG >Mature_449_residues TGQSCGDFARRVSSLTSLSNSKKRNAKMSDLKTAALEYHANPRPGKLSVELTKATATARDLSLAYSPGVAEPVREIARDP ELAYKYTGKGNLVAVISDGTAILGLGNLGPLASKPVMEGKGVLFKRFAGIDVFDIEVDSESPQAFIDTVKRISITFGGIN LEDIKAPECFEIERALIEQCDIPVFHDDQHGTAIVTAAGMINALEIAGKTLADAKIVCLGAGAAAISCMKLLVSMGAKVE NIFMVDRTGVIHAGRDDLNQYKAVFAHPTEKRTLDDAIEGADVFVGLSGPNLLSAEQLKRMAANPIVFACSNPDPEISPE LAHATRNDVIMATGRSDYPNQVNNVLGFPFIFRGALDVRAKRINEEMKIAAANALRELAKLPVPQEVCDAYGGISLEFGR EYIIPKPMDKRLITVISDAVAKAAIETGVATLPYPKNYPLKSVDDVFNG
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=405, Percent_Identity=28.1481481481481, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI62420882, Length=345, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI62420880, Length=345, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI239049447, Length=345, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4505145, Length=346, Percent_Identity=27.7456647398844, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI270265879, Length=321, Percent_Identity=28.3489096573209, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1788806, Length=405, Percent_Identity=61.2345679012346, Blast_Score=489, Evalue=1e-139, Organism=Escherichia coli, GI87081919, Length=288, Percent_Identity=28.125, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17537199, Length=346, Percent_Identity=28.6127167630058, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707242, Length=394, Percent_Identity=27.1573604060914, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI78707238, Length=394, Percent_Identity=27.1573604060914, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI78707240, Length=411, Percent_Identity=26.5206812652068, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24646388, Length=347, Percent_Identity=31.4121037463977, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24646386, Length=347, Percent_Identity=31.4121037463977, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI281362674, Length=460, Percent_Identity=27.6086956521739, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI21356279, Length=460, Percent_Identity=27.6086956521739, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI281362672, Length=460, Percent_Identity=27.6086956521739, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 48250; Mature: 48119
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGQSCGDFARRVSSLTSLSNSKKRNAKMSDLKTAALEYHANPRPGKLSVELTKATATAR CCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHH DLSLAYSPGVAEPVREIARDPELAYKYTGKGNLVAVISDGTAILGLGNLGPLASKPVMEG HEEEEECCCCHHHHHHHHCCCCEEEEECCCCCEEEEEECCEEEEEECCCCCCCCCCCCCC KGVLFKRFAGIDVFDIEVDSESPQAFIDTVKRISITFGGINLEDIKAPECFEIERALIEQ CCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHEEEEECCCCHHHCCCCCHHHHHHHHHHH CDIPVFHDDQHGTAIVTAAGMINALEIAGKTLADAKIVCLGAGAAAISCMKLLVSMGAKV CCCCEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCE ENIFMVDRTGVIHAGRDDLNQYKAVFAHPTEKRTLDDAIEGADVFVGLSGPNLLSAEQLK EEEEEEECCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHH RMAANPIVFACSNPDPEISPELAHATRNDVIMATGRSDYPNQVNNVLGFPFIFRGALDVR HHHCCCEEEEECCCCCCCCCHHHHCCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHH AKRINEEMKIAAANALRELAKLPVPQEVCDAYGGISLEFGREYIIPKPMDKRLITVISDA HHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEECCCEECCCCCCCHHHHHHHHHH VAKAAIETGVATLPYPKNYPLKSVDDVFNG HHHHHHHHCCEECCCCCCCCCCHHHHHHCC >Mature Secondary Structure TGQSCGDFARRVSSLTSLSNSKKRNAKMSDLKTAALEYHANPRPGKLSVELTKATATAR CCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHH DLSLAYSPGVAEPVREIARDPELAYKYTGKGNLVAVISDGTAILGLGNLGPLASKPVMEG HEEEEECCCCHHHHHHHHCCCCEEEEECCCCCEEEEEECCEEEEEECCCCCCCCCCCCCC KGVLFKRFAGIDVFDIEVDSESPQAFIDTVKRISITFGGINLEDIKAPECFEIERALIEQ CCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHEEEEECCCCHHHCCCCCHHHHHHHHHHH CDIPVFHDDQHGTAIVTAAGMINALEIAGKTLADAKIVCLGAGAAAISCMKLLVSMGAKV CCCCEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCE ENIFMVDRTGVIHAGRDDLNQYKAVFAHPTEKRTLDDAIEGADVFVGLSGPNLLSAEQLK EEEEEEECCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHH RMAANPIVFACSNPDPEISPELAHATRNDVIMATGRSDYPNQVNNVLGFPFIFRGALDVR HHHCCCEEEEECCCCCCCCCHHHHCCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHH AKRINEEMKIAAANALRELAKLPVPQEVCDAYGGISLEFGREYIIPKPMDKRLITVISDA HHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEECCCEECCCCCCCHHHHHHHHHH VAKAAIETGVATLPYPKNYPLKSVDDVFNG HHHHHHHHCCEECCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]