Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is proX [C]
Identifier: 77456590
GI number: 77456590
Start: 413509
End: 414477
Strand: Direct
Name: proX [C]
Synonym: Pfl01_0362
Alternate gene names: 77456590
Gene position: 413509-414477 (Clockwise)
Preceding gene: 77456589
Following gene: 77456591
Centisome position: 6.42
GC content: 60.78
Gene sequence:
>969_bases ATGAAATCGAACAAGACCCTGCTGACCACCTTGCTTTCCATGGGCCTGCTGGCCAGCGCCGGCGCGACCCAGGCCGCCGG CTGGTGCGAGTCCGGCAAACCGGTGAAATTCGCCGGCCTGAACTGGGAAAGCGGCATGCTGCTGACCGACGTTCTGCAAG TGGTGCTGGAAAAAGGTTACGACTGCAAGACCGACAGCCTGCCGGGCAACTCCATCACCATGGAGAACGCCCTGAGCAGC AACGACATCCAGATCTTCGCCGAAGAATGGGTCGGCCGCAGCGAGGTCTGGAACAAGGCCGAGAAGGCCGGCAAGGTCGT CGGTGTCGGCGCCCCGGTGGTGGGTGCGATCGAAGGCTGGTACGTGCCGCGCTACGTGATCGAAGGCGACGCCAAGCGCA AACTCGAAGCCAAGGCGCCGGACCTGAAAAACATTGCCGACCTGGGCAAATACTCGGCCATCTTCAAGGACGCCGAAGAA CCTTCCAAGGGCCGCTTCTACAACTGCCCGGCCGGCTGGACCTGCGAGCTGGACAACAGCGAAATGCTGAAAAGCTACGG TCTGGAAAACAGCTACACCAACTTCCGTCCGGGCACAGGTCCAGCGCTGGATGCGGCTGTGCTGTCGAGCTACAAGCGTG GCGAGCCGATCCTGTTCTACTACTGGTCGCCAACCCCGCTGATGGGCCAGATCGACGCGGTGAAACTGGAAGAGAAACCG GGCGTCGACAAGACCGTGACCATCAAGGTCGGCCTGTCCAAGACCTTCCACGAGCAAGCGCCGGAACTGGTGGCCGTGCT GGAAAAGGTCAACCTGCCGATCGACCTGCTGAACCAGAACCTGGGCCGCATGGCGAAGGAACGTATCGAGTCGCCAAAAC TGGCGAAAATCTTCCTCAAGGAACATCCTGAAGTCTGGCACGCGTGGGTGAGTGAAGACGCTGCCAAGAAAATCGACGCG GCGCTGTAG
Upstream 100 bases:
>100_bases GGGGCCGGTCGCGCTGCGGCGCAGGCCTGATTTGGACGTGGACAGGGCTGGATGCCTCTTGACTGCCGTAAGCCAATTCA TGATTAGGAGCGTCACAACA
Downstream 100 bases:
>100_bases GTCGAATTCCTCCCGGCCAACCGAGAGGCTGGCCGGGGTGTTCGCCGCAATCGCTTGATTGAGTTTCCTGATTGAGAGCC GCTTATGTTTCCCGAAAGCT
Product: glycine betaine ABC transporter substrate-binding protein
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKSNKTLLTTLLSMGLLASAGATQAAGWCESGKPVKFAGLNWESGMLLTDVLQVVLEKGYDCKTDSLPGNSITMENALSS NDIQIFAEEWVGRSEVWNKAEKAGKVVGVGAPVVGAIEGWYVPRYVIEGDAKRKLEAKAPDLKNIADLGKYSAIFKDAEE PSKGRFYNCPAGWTCELDNSEMLKSYGLENSYTNFRPGTGPALDAAVLSSYKRGEPILFYYWSPTPLMGQIDAVKLEEKP GVDKTVTIKVGLSKTFHEQAPELVAVLEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLKEHPEVWHAWVSEDAAKKIDA AL
Sequences:
>Translated_322_residues MKSNKTLLTTLLSMGLLASAGATQAAGWCESGKPVKFAGLNWESGMLLTDVLQVVLEKGYDCKTDSLPGNSITMENALSS NDIQIFAEEWVGRSEVWNKAEKAGKVVGVGAPVVGAIEGWYVPRYVIEGDAKRKLEAKAPDLKNIADLGKYSAIFKDAEE PSKGRFYNCPAGWTCELDNSEMLKSYGLENSYTNFRPGTGPALDAAVLSSYKRGEPILFYYWSPTPLMGQIDAVKLEEKP GVDKTVTIKVGLSKTFHEQAPELVAVLEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLKEHPEVWHAWVSEDAAKKIDA AL >Mature_322_residues MKSNKTLLTTLLSMGLLASAGATQAAGWCESGKPVKFAGLNWESGMLLTDVLQVVLEKGYDCKTDSLPGNSITMENALSS NDIQIFAEEWVGRSEVWNKAEKAGKVVGVGAPVVGAIEGWYVPRYVIEGDAKRKLEAKAPDLKNIADLGKYSAIFKDAEE PSKGRFYNCPAGWTCELDNSEMLKSYGLENSYTNFRPGTGPALDAAVLSSYKRGEPILFYYWSPTPLMGQIDAVKLEEKP GVDKTVTIKVGLSKTFHEQAPELVAVLEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLKEHPEVWHAWVSEDAAKKIDA AL
Specific function: Member Of A Multicomponent Binding-Protein-Dependent Transport System (The Prou Transporter) Which Serves As The Glycine Betaine/L-Proline Transporter. [C]
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35284; Mature: 35284
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNKTLLTTLLSMGLLASAGATQAAGWCESGKPVKFAGLNWESGMLLTDVLQVVLEKGY CCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCC DCKTDSLPGNSITMENALSSNDIQIFAEEWVGRSEVWNKAEKAGKVVGVGAPVVGAIEGW CCCCCCCCCCCEEHHHCCCCCCEEEEHHHHCCHHHHHHHHHHCCCEEEECCCHHHHHCCC YVPRYVIEGDAKRKLEAKAPDLKNIADLGKYSAIFKDAEEPSKGRFYNCPAGWTCELDNS CCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEECCCH EMLKSYGLENSYTNFRPGTGPALDAAVLSSYKRGEPILFYYWSPTPLMGQIDAVKLEEKP HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCC GVDKTVTIKVGLSKTFHEQAPELVAVLEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLK CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH EHPEVWHAWVSEDAAKKIDAAL HCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSNKTLLTTLLSMGLLASAGATQAAGWCESGKPVKFAGLNWESGMLLTDVLQVVLEKGY CCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCC DCKTDSLPGNSITMENALSSNDIQIFAEEWVGRSEVWNKAEKAGKVVGVGAPVVGAIEGW CCCCCCCCCCCEEHHHCCCCCCEEEEHHHHCCHHHHHHHHHHCCCEEEECCCHHHHHCCC YVPRYVIEGDAKRKLEAKAPDLKNIADLGKYSAIFKDAEEPSKGRFYNCPAGWTCELDNS CCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEECCCH EMLKSYGLENSYTNFRPGTGPALDAAVLSSYKRGEPILFYYWSPTPLMGQIDAVKLEEKP HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCC GVDKTVTIKVGLSKTFHEQAPELVAVLEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLK CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH EHPEVWHAWVSEDAAKKIDAAL HCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA