| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is cmcT [H]
Identifier: 77454670
GI number: 77454670
Start: 99891
End: 101312
Strand: Direct
Name: cmcT [H]
Synonym: pREL1_0103
Alternate gene names: 77454670
Gene position: 99891-101312 (Clockwise)
Preceding gene: 77454668
Following gene: 77454671
Centisome position: 36.78
GC content: 59.0
Gene sequence:
>1422_bases ATGCCTCGAAGTCCGATGAACACCACGCTCGTCGAGGAAAACCGACATCGCTCCGCGAGCATCGCACTCGCAGTGGTGTG TGCCGCGCAGTTCATGGTTGTTCTTGATATCTCGGTGGTGAATGTTGCTCTGCCGTCCATCCGCGAGAGTCTTGGGTTCG ACGCTGGCGGATTGGCATGGGTAGTGAATGCCTACGCATTGACCTTTGCGGGCTTCCTGCTGCTCGGTGGCCGTCTGGCG GATCTTCTGGGGCGCCGACGGGTCTTTTTGATCGGCTTGGCAGTGTTTTCCGGAGCAAGCCTCGCCGGTGGCCTCGTAAA TTCGGCGTCTCTTCTCGTCGTGGCCAGGGCGGTTCAAGGCTTGGGTGCTGCGATCCTCGCGCCAGCGACGCTAACTGTTT TGACCGCCACTTTCCCCGAAGGCCCTCGTCGCACTCGTGCACTGGCCACTTGGACGGCGGTGGGCATCGCAGGCGGTACA GCAGGAAATTTGGTGGGAGGTATCCTCACCGAATATCTGACATGGCGGTCGACGCTGCTGATCAATGTGCCGATCGGGAT GGCTGCAGTGCTGCTGGCTGTTCGCTATATTGCCGCTGATCGTCCCTCTGGGCCGCGTCCACGACTGGACTTCGCTGGAG CAGTCTTGGCGACAGCAGGTCTCGGATCCTTGGCTTACGGTATCGCCCAGGCTGCAGATGATGGTTGGTCGGCAAACTCG ACCATCTCTGGCATTGCGATTGGCGTATCGCTCCTGATCGCCTTCGTCGTCGTCGAAAAATGGGTGACATCGTCACCTCT GATACCGCTGCATATCTTTCGGAACAGGGCAGTCTCCATCGGCAATGTGATCATGCTGCTGGCTGGAGCATGCCTGAACC CGATGTGGTACTTCCTGACTCTGTCCATGCAGAATGTACTCGGCTACAGCCCCGTACAAACAGGTCTGGCCTTTCTGCCT CATACCATTGTCGCGATAGCTATCGGGGTGGGGCTGACTCCCTGGATGATGGGCAGAATTGACGGCCGCTTTCTCATTGC ATCCGGATCGATCGTGGCTGCTGCAGGATTCTGGGTACAAGCCCAACTCGATACCGACAGCGGTTATGTGCAGGGAATCC TTCTGCCCGCCATCATCTTCAGCGTCGGGAGTGGAATACTGAACACTCCCATCACTGCTGCTGTCACCTCAGGGATCCCC GCCGCCGACGCGGGTGCTGCCTCAGGGCTGATGAATACCACCAAACAGATCGGTGGCGCGCTCGGGCTCTCCGTCCTGGT CACTTATGCAGCTACGAGCAGTCTCGACAAGGACGACCTCCTGGCCTCGTACAACGGTGCGTTCTACGCCATTGCGGCAA TCATGATCGTGACGGCACTCTGTGCGCTGGCCTTACCGGCGCACAGGGACCACGCAGAATGA
Upstream 100 bases:
>100_bases CTCCCTGTGTCGGAGGTAGAGCCGGAACTCGACATCTGCAAAAACTCACCTTGGTACGTTTGTATAAGATACAGATGTAC CAAGTTTTGGGGAGTGGCCT
Downstream 100 bases:
>100_bases AACCTCTACCCCGCCAAAGATATACAGCTGAGGTCGAGAACTGATCGCGTGCTGTCCGGTTTTGTGAGATATGACGTGCT GGCCTTGGGAGGCACCGTCA
Product: putative drug resistance efflux protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MPRSPMNTTLVEENRHRSASIALAVVCAAQFMVVLDISVVNVALPSIRESLGFDAGGLAWVVNAYALTFAGFLLLGGRLA DLLGRRRVFLIGLAVFSGASLAGGLVNSASLLVVARAVQGLGAAILAPATLTVLTATFPEGPRRTRALATWTAVGIAGGT AGNLVGGILTEYLTWRSTLLINVPIGMAAVLLAVRYIAADRPSGPRPRLDFAGAVLATAGLGSLAYGIAQAADDGWSANS TISGIAIGVSLLIAFVVVEKWVTSSPLIPLHIFRNRAVSIGNVIMLLAGACLNPMWYFLTLSMQNVLGYSPVQTGLAFLP HTIVAIAIGVGLTPWMMGRIDGRFLIASGSIVAAAGFWVQAQLDTDSGYVQGILLPAIIFSVGSGILNTPITAAVTSGIP AADAGAASGLMNTTKQIGGALGLSVLVTYAATSSLDKDDLLASYNGAFYAIAAIMIVTALCALALPAHRDHAE
Sequences:
>Translated_473_residues MPRSPMNTTLVEENRHRSASIALAVVCAAQFMVVLDISVVNVALPSIRESLGFDAGGLAWVVNAYALTFAGFLLLGGRLA DLLGRRRVFLIGLAVFSGASLAGGLVNSASLLVVARAVQGLGAAILAPATLTVLTATFPEGPRRTRALATWTAVGIAGGT AGNLVGGILTEYLTWRSTLLINVPIGMAAVLLAVRYIAADRPSGPRPRLDFAGAVLATAGLGSLAYGIAQAADDGWSANS TISGIAIGVSLLIAFVVVEKWVTSSPLIPLHIFRNRAVSIGNVIMLLAGACLNPMWYFLTLSMQNVLGYSPVQTGLAFLP HTIVAIAIGVGLTPWMMGRIDGRFLIASGSIVAAAGFWVQAQLDTDSGYVQGILLPAIIFSVGSGILNTPITAAVTSGIP AADAGAASGLMNTTKQIGGALGLSVLVTYAATSSLDKDDLLASYNGAFYAIAAIMIVTALCALALPAHRDHAE >Mature_472_residues PRSPMNTTLVEENRHRSASIALAVVCAAQFMVVLDISVVNVALPSIRESLGFDAGGLAWVVNAYALTFAGFLLLGGRLAD LLGRRRVFLIGLAVFSGASLAGGLVNSASLLVVARAVQGLGAAILAPATLTVLTATFPEGPRRTRALATWTAVGIAGGTA GNLVGGILTEYLTWRSTLLINVPIGMAAVLLAVRYIAADRPSGPRPRLDFAGAVLATAGLGSLAYGIAQAADDGWSANST ISGIAIGVSLLIAFVVVEKWVTSSPLIPLHIFRNRAVSIGNVIMLLAGACLNPMWYFLTLSMQNVLGYSPVQTGLAFLPH TIVAIAIGVGLTPWMMGRIDGRFLIASGSIVAAAGFWVQAQLDTDSGYVQGILLPAIIFSVGSGILNTPITAAVTSGIPA ADAGAASGLMNTTKQIGGALGLSVLVTYAATSSLDKDDLLASYNGAFYAIAAIMIVTALCALALPAHRDHAE
Specific function: Involved in cephamycin export [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=427, Percent_Identity=29.03981264637, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1788710, Length=445, Percent_Identity=27.8651685393258, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI87081983, Length=394, Percent_Identity=27.1573604060914, Blast_Score=133, Evalue=3e-32, Organism=Escherichia coli, GI1790195, Length=421, Percent_Identity=26.603325415677, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI1788392, Length=306, Percent_Identity=31.0457516339869, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6324954, Length=327, Percent_Identity=26.605504587156, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6325455, Length=238, Percent_Identity=28.9915966386555, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323520, Length=431, Percent_Identity=25.2900232018561, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323935, Length=448, Percent_Identity=24.5535714285714, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6322958, Length=361, Percent_Identity=23.8227146814404, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321663, Length=151, Percent_Identity=27.1523178807947, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48605; Mature: 48474
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSPMNTTLVEENRHRSASIALAVVCAAQFMVVLDISVVNVALPSIRESLGFDAGGLAW CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VVNAYALTFAGFLLLGGRLADLLGRRRVFLIGLAVFSGASLAGGLVNSASLLVVARAVQG HHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHCCCHHHCHHHCHHHHHHHHHHHHH LGAAILAPATLTVLTATFPEGPRRTRALATWTAVGIAGGTAGNLVGGILTEYLTWRSTLL CCHHHHCCHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEEE INVPIGMAAVLLAVRYIAADRPSGPRPRLDFAGAVLATAGLGSLAYGIAQAADDGWSANS EECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC TISGIAIGVSLLIAFVVVEKWVTSSPLIPLHIFRNRAVSIGNVIMLLAGACLNPMWYFLT CHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LSMQNVLGYSPVQTGLAFLPHTIVAIAIGVGLTPWMMGRIDGRFLIASGSIVAAAGFWVQ HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCEEEEECEEEE AQLDTDSGYVQGILLPAIIFSVGSGILNTPITAAVTSGIPAADAGAASGLMNTTKQIGGA EEECCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LGLSVLVTYAATSSLDKDDLLASYNGAFYAIAAIMIVTALCALALPAHRDHAE HHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PRSPMNTTLVEENRHRSASIALAVVCAAQFMVVLDISVVNVALPSIRESLGFDAGGLAW CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VVNAYALTFAGFLLLGGRLADLLGRRRVFLIGLAVFSGASLAGGLVNSASLLVVARAVQG HHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHCCCHHHCHHHCHHHHHHHHHHHHH LGAAILAPATLTVLTATFPEGPRRTRALATWTAVGIAGGTAGNLVGGILTEYLTWRSTLL CCHHHHCCHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEEE INVPIGMAAVLLAVRYIAADRPSGPRPRLDFAGAVLATAGLGSLAYGIAQAADDGWSANS EECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC TISGIAIGVSLLIAFVVVEKWVTSSPLIPLHIFRNRAVSIGNVIMLLAGACLNPMWYFLT CHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LSMQNVLGYSPVQTGLAFLPHTIVAIAIGVGLTPWMMGRIDGRFLIASGSIVAAAGFWVQ HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCEEEEECEEEE AQLDTDSGYVQGILLPAIIFSVGSGILNTPITAAVTSGIPAADAGAASGLMNTTKQIGGA EEECCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LGLSVLVTYAATSSLDKDDLLASYNGAFYAIAAIMIVTALCALALPAHRDHAE HHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8440253 [H]