Click here to switch to the map view.

The map label for this gene is 77454661

Identifier: 77454661

GI number: 77454661

Start: 88268

End: 90745

Strand: Direct

Name: 77454661

Synonym: pREL1_0094

Alternate gene names: NA

Gene position: 88268-90745 (Clockwise)

Preceding gene: 77454660

Following gene: 77454662

Centisome position: 32.5

GC content: 60.21

Gene sequence:

>2478_bases
ATGGTTTCTGCACGTGTCTCCAAAGCGCCTGCCAGTTGGAGCCTGAACGTCGATGCCCGCGAAGGTGCGAATCGCAGTGT
CATCGACACACTCCTCGATCGGTATCCACCGCGTGTGGTGCCATCGTCGTGGAAGACGACTGAACTCGGCCGAGCGGCCG
CACTGAAGCGGGTGGAAGCACTCATGATCCGGGCTCCGGGTAGCGAGAACTTTCAGCGCGATGCTGTCCGAGGTGCGGGG
ATGCTTCTGCGGTGGCTGAATTCGTTTCCAGGAAAGAGCTGGCAAGGCCGCTGGAACGGCAGTTGCGTCGCCGAACACGG
TCTCGGATGGGTTTCGATACCGGAAACGTGGATGGACGAACAGGGAGTGCAATCGGTTCGGCCCACAGTCCTGACGCATG
CCCTGATCGGATTGTTCGTCGCGGATCTGATTCGCCCCGATTTACGTTTCGTGGTCCAACTGCACCGGTCGCACTACTGG
CGCGACTGGGCGGCAATCAGCCGAGATCCGAGAGGATTCGAACGACTGGAGGCCGCGGCCGGTGCAGAGACTGCCCAAGC
AATGCAAGGTCGAACTGCACGATGGCAGATCTCCATGTTGATCCTGTCCAAAGGCGGCGGCCTATCCGACATCACCGTCG
GCGACTGCGTCGAACTTCGCCAGGCGGAGCTCGCCGTATGTTCGAGAGGTAAAACGCGCTACCTCTTCTACAAACTTCTC
CACGACATCGGGATCTTCCCACCAGACGCGCCACCGACTTTACGATTCGTCACGGTGTATCGAGGACAGAGCACCGTCGC
AGAACTCGTCGATCGCTTCGACATCGCAAACGCCGACGTCCGGAATCTCCTCGTGGACTATCTGTCCGAACGTCACCCTT
CGCTGGATTACACGACGCTCGACAATCTCTCACGACATTTGGCGCTGCATTTCTGGAAAAACCTGGAGACCACCCATCCC
GGAATCAACTCGCTGCAACTCGACCGCGGCGTAGCCCAGGCATGGAAAGAACGCATGCATTGGAAGGTCAGCCGCCGCCG
ACTCCCCGACGGAACGTACGCCGAGACCCGTAGTCCACGAATGAACTACACCGACATGCTGACAGCTGTGCGCGCGTTCT
ATCTCGACCTGGCGGCGTGGGCAGCACTCGACCCCGCACGGTGGGCGAGGTGGGTAGTGCCGTGCCCGATCGGCCCAGGA
GAGACGAGCGCGAAGAAAATCGGACGCCGACGCAAAGCACGCATGGATCAGCGCACACGAGAGCGACTACCTCGACTGCC
AGAACTGGTGCGTATCGCAGAACAACGAGCCCATGACGCCAGGATGCTCCTCGAGGCCGCTGTTGCAGCATCGCCGGGCT
CCAAATTCACCGTCCTCGGCAAGACCTACACCAAGTCGGACCCATGGTTGAAAGCAAGCGCTGACGGCATTCCGGTCATC
TACGACTCCGAGGGACGAACCATCCGGCTCCGAGAAGCCGAGAACCGAGCATTCTGGGCTCTGGCAACTGTGGAAGTCCT
GCGACACACAGGCGTTCGAATCGAAGAGATGCTCGAAATCAGCCATCACAGCATCACCCAATATCGATTACCCGCCACCG
GAGAGCTCATCCCGCTACTGCAGATAGCACCCTCGAAGACAGACGAGGAACGCCTACTTGTGGTCAGCCCGGACCTCGCC
GACATGCTGTCGACAATCGTGTCCCGAATACGCGGCGCGGACGGAGGAGTACCCCTTGTGCCTCTTTACGACCGGAACGA
ACGTATCTGGGTGGCCCCGGCCCCACTCTTGTTCCAATGGAAATGCGGTGGTCACCACCGCGCGGTATCCGCAGGTTTGA
TCCGCAATGCACTGACCGAACTCATCGATGCGGCAGGAGTGAAGGACGCAGCAGGCGAACCGCTGTACTTCCAGCCCCAT
GATCTGCGCCGAATCTTCGCTACCGACGCCATCATGAACGGCATGCCTCCGCATATCGCTCAAGTTCTGTTGGGGCACAA
GGACATCAACACAACCATGGGATACAAAGCCATCTACCCGGAGGAAGCGATCAACGGTCACCGCGCCTTCATCTCGCGCC
GACGTGCCCTCCGCCCGAGCGAGGAGTACCGCACCCCGACAGATACCGAATGGGATGAGTTTCGCGGACACTTCGAGCGC
CGCAAACTCGCCCTCGGCGAATGCGGCCGCGCCTACGGCACCAGCTGCCAGCATGAACACAGTTGCATCCGGTGCCCTGT
ATTGCGTGTTGATCCCGCACAACGTTTCCGGCTCGTCGAGATACGCGACAACCTTGCTGCCCGAATTGCCGAGGCGGACA
GCGAAGGCTGGATCGGTGAAGCAGAAGGTCTCCGCGTAAGCCTCGTGGCTACCGAGGAAAAGCTCGATCAGATCGATCGA
CGGGCCCGTCGTGCCGTTCAACTCAACATGCCCAGCTTCCCGGACATCGTCGCGCACATCGTCCAACCTCCTGCATGA

Upstream 100 bases:

>100_bases
ACCATGCTCGATACACCGGCAACACCCAATCGCTGCACGCACCGCCAGCGCCGGGCTACAACCCGGCAGTGTTGGACGTA
CTTTTCGGAGGTCGACGCTG

Downstream 100 bases:

>100_bases
CGAGCATGAACCTGATTGGGATGAGCGTGCCGGATCGGGAACCTTCCGTGCCGGGTGCAGCAGCCGGTAGACGGATGGCA
GGTGGTAGCGACCGAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase Family Protein; Site-Specific Recombinase XerD; Phage Integrase; Integrase/Recombinase

Number of amino acids: Translated: 825; Mature: 825

Protein sequence:

>825_residues
MVSARVSKAPASWSLNVDAREGANRSVIDTLLDRYPPRVVPSSWKTTELGRAAALKRVEALMIRAPGSENFQRDAVRGAG
MLLRWLNSFPGKSWQGRWNGSCVAEHGLGWVSIPETWMDEQGVQSVRPTVLTHALIGLFVADLIRPDLRFVVQLHRSHYW
RDWAAISRDPRGFERLEAAAGAETAQAMQGRTARWQISMLILSKGGGLSDITVGDCVELRQAELAVCSRGKTRYLFYKLL
HDIGIFPPDAPPTLRFVTVYRGQSTVAELVDRFDIANADVRNLLVDYLSERHPSLDYTTLDNLSRHLALHFWKNLETTHP
GINSLQLDRGVAQAWKERMHWKVSRRRLPDGTYAETRSPRMNYTDMLTAVRAFYLDLAAWAALDPARWARWVVPCPIGPG
ETSAKKIGRRRKARMDQRTRERLPRLPELVRIAEQRAHDARMLLEAAVAASPGSKFTVLGKTYTKSDPWLKASADGIPVI
YDSEGRTIRLREAENRAFWALATVEVLRHTGVRIEEMLEISHHSITQYRLPATGELIPLLQIAPSKTDEERLLVVSPDLA
DMLSTIVSRIRGADGGVPLVPLYDRNERIWVAPAPLLFQWKCGGHHRAVSAGLIRNALTELIDAAGVKDAAGEPLYFQPH
DLRRIFATDAIMNGMPPHIAQVLLGHKDINTTMGYKAIYPEEAINGHRAFISRRRALRPSEEYRTPTDTEWDEFRGHFER
RKLALGECGRAYGTSCQHEHSCIRCPVLRVDPAQRFRLVEIRDNLAARIAEADSEGWIGEAEGLRVSLVATEEKLDQIDR
RARRAVQLNMPSFPDIVAHIVQPPA

Sequences:

>Translated_825_residues
MVSARVSKAPASWSLNVDAREGANRSVIDTLLDRYPPRVVPSSWKTTELGRAAALKRVEALMIRAPGSENFQRDAVRGAG
MLLRWLNSFPGKSWQGRWNGSCVAEHGLGWVSIPETWMDEQGVQSVRPTVLTHALIGLFVADLIRPDLRFVVQLHRSHYW
RDWAAISRDPRGFERLEAAAGAETAQAMQGRTARWQISMLILSKGGGLSDITVGDCVELRQAELAVCSRGKTRYLFYKLL
HDIGIFPPDAPPTLRFVTVYRGQSTVAELVDRFDIANADVRNLLVDYLSERHPSLDYTTLDNLSRHLALHFWKNLETTHP
GINSLQLDRGVAQAWKERMHWKVSRRRLPDGTYAETRSPRMNYTDMLTAVRAFYLDLAAWAALDPARWARWVVPCPIGPG
ETSAKKIGRRRKARMDQRTRERLPRLPELVRIAEQRAHDARMLLEAAVAASPGSKFTVLGKTYTKSDPWLKASADGIPVI
YDSEGRTIRLREAENRAFWALATVEVLRHTGVRIEEMLEISHHSITQYRLPATGELIPLLQIAPSKTDEERLLVVSPDLA
DMLSTIVSRIRGADGGVPLVPLYDRNERIWVAPAPLLFQWKCGGHHRAVSAGLIRNALTELIDAAGVKDAAGEPLYFQPH
DLRRIFATDAIMNGMPPHIAQVLLGHKDINTTMGYKAIYPEEAINGHRAFISRRRALRPSEEYRTPTDTEWDEFRGHFER
RKLALGECGRAYGTSCQHEHSCIRCPVLRVDPAQRFRLVEIRDNLAARIAEADSEGWIGEAEGLRVSLVATEEKLDQIDR
RARRAVQLNMPSFPDIVAHIVQPPA
>Mature_825_residues
MVSARVSKAPASWSLNVDAREGANRSVIDTLLDRYPPRVVPSSWKTTELGRAAALKRVEALMIRAPGSENFQRDAVRGAG
MLLRWLNSFPGKSWQGRWNGSCVAEHGLGWVSIPETWMDEQGVQSVRPTVLTHALIGLFVADLIRPDLRFVVQLHRSHYW
RDWAAISRDPRGFERLEAAAGAETAQAMQGRTARWQISMLILSKGGGLSDITVGDCVELRQAELAVCSRGKTRYLFYKLL
HDIGIFPPDAPPTLRFVTVYRGQSTVAELVDRFDIANADVRNLLVDYLSERHPSLDYTTLDNLSRHLALHFWKNLETTHP
GINSLQLDRGVAQAWKERMHWKVSRRRLPDGTYAETRSPRMNYTDMLTAVRAFYLDLAAWAALDPARWARWVVPCPIGPG
ETSAKKIGRRRKARMDQRTRERLPRLPELVRIAEQRAHDARMLLEAAVAASPGSKFTVLGKTYTKSDPWLKASADGIPVI
YDSEGRTIRLREAENRAFWALATVEVLRHTGVRIEEMLEISHHSITQYRLPATGELIPLLQIAPSKTDEERLLVVSPDLA
DMLSTIVSRIRGADGGVPLVPLYDRNERIWVAPAPLLFQWKCGGHHRAVSAGLIRNALTELIDAAGVKDAAGEPLYFQPH
DLRRIFATDAIMNGMPPHIAQVLLGHKDINTTMGYKAIYPEEAINGHRAFISRRRALRPSEEYRTPTDTEWDEFRGHFER
RKLALGECGRAYGTSCQHEHSCIRCPVLRVDPAQRFRLVEIRDNLAARIAEADSEGWIGEAEGLRVSLVATEEKLDQIDR
RARRAVQLNMPSFPDIVAHIVQPPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92916; Mature: 92916

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSARVSKAPASWSLNVDAREGANRSVIDTLLDRYPPRVVPSSWKTTELGRAAALKRVEA
CCCCCCCCCCCCEEEECHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
LMIRAPGSENFQRDAVRGAGMLLRWLNSFPGKSWQGRWNGSCVAEHGLGWVSIPETWMDE
HEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHCCCCEEECCHHHCCH
QGVQSVRPTVLTHALIGLFVADLIRPDLRFVVQLHRSHYWRDWAAISRDPRGFERLEAAA
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
GAETAQAMQGRTARWQISMLILSKGGGLSDITVGDCVELRQAELAVCSRGKTRYLFYKLL
CHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HDIGIFPPDAPPTLRFVTVYRGQSTVAELVDRFDIANADVRNLLVDYLSERHPSLDYTTL
HHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH
DNLSRHLALHFWKNLETTHPGINSLQLDRGVAQAWKERMHWKVSRRRLPDGTYAETRSPR
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
MNYTDMLTAVRAFYLDLAAWAALDPARWARWVVPCPIGPGETSAKKIGRRRKARMDQRTR
CCHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
ERLPRLPELVRIAEQRAHDARMLLEAAVAASPGSKFTVLGKTYTKSDPWLKASADGIPVI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEECCCCCCEEECCCCCEEE
YDSEGRTIRLREAENRAFWALATVEVLRHTGVRIEEMLEISHHSITQYRLPATGELIPLL
ECCCCCEEEEEECCCCEEHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCEEEHE
QIAPSKTDEERLLVVSPDLADMLSTIVSRIRGADGGVPLVPLYDRNERIWVAPAPLLFQW
EECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCEEEEE
KCGGHHRAVSAGLIRNALTELIDAAGVKDAAGEPLYFQPHDLRRIFATDAIMNGMPPHIA
ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHH
QVLLGHKDINTTMGYKAIYPEEAINGHRAFISRRRALRPSEEYRTPTDTEWDEFRGHFER
HHHHCCCCCCCCCCCEEECCHHHCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHH
RKLALGECGRAYGTSCQHEHSCIRCPVLRVDPAQRFRLVEIRDNLAARIAEADSEGWIGE
HHHHHHHCCHHHCCCCCCCCCHHCCCEEEECHHHHEEEEEHHHHHHHHHHHCCCCCCCCC
AEGLRVSLVATEEKLDQIDRRARRAVQLNMPSFPDIVAHIVQPPA
CCCCEEEEEECHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MVSARVSKAPASWSLNVDAREGANRSVIDTLLDRYPPRVVPSSWKTTELGRAAALKRVEA
CCCCCCCCCCCCEEEECHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
LMIRAPGSENFQRDAVRGAGMLLRWLNSFPGKSWQGRWNGSCVAEHGLGWVSIPETWMDE
HEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHCCCCEEECCHHHCCH
QGVQSVRPTVLTHALIGLFVADLIRPDLRFVVQLHRSHYWRDWAAISRDPRGFERLEAAA
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
GAETAQAMQGRTARWQISMLILSKGGGLSDITVGDCVELRQAELAVCSRGKTRYLFYKLL
CHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HDIGIFPPDAPPTLRFVTVYRGQSTVAELVDRFDIANADVRNLLVDYLSERHPSLDYTTL
HHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH
DNLSRHLALHFWKNLETTHPGINSLQLDRGVAQAWKERMHWKVSRRRLPDGTYAETRSPR
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
MNYTDMLTAVRAFYLDLAAWAALDPARWARWVVPCPIGPGETSAKKIGRRRKARMDQRTR
CCHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
ERLPRLPELVRIAEQRAHDARMLLEAAVAASPGSKFTVLGKTYTKSDPWLKASADGIPVI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEECCCCCCEEECCCCCEEE
YDSEGRTIRLREAENRAFWALATVEVLRHTGVRIEEMLEISHHSITQYRLPATGELIPLL
ECCCCCEEEEEECCCCEEHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCEEEHE
QIAPSKTDEERLLVVSPDLADMLSTIVSRIRGADGGVPLVPLYDRNERIWVAPAPLLFQW
EECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCEEEEE
KCGGHHRAVSAGLIRNALTELIDAAGVKDAAGEPLYFQPHDLRRIFATDAIMNGMPPHIA
ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHH
QVLLGHKDINTTMGYKAIYPEEAINGHRAFISRRRALRPSEEYRTPTDTEWDEFRGHFER
HHHHCCCCCCCCCCCEEECCHHHCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHH
RKLALGECGRAYGTSCQHEHSCIRCPVLRVDPAQRFRLVEIRDNLAARIAEADSEGWIGE
HHHHHHHCCHHHCCCCCCCCCHHCCCEEEECHHHHEEEEEHHHHHHHHHHHCCCCCCCCC
AEGLRVSLVATEEKLDQIDRRARRAVQLNMPSFPDIVAHIVQPPA
CCCCEEEEEECHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA