Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
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Accession | NC_007435 |
Length | 3,181,762 |
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The map label for this gene is 76817695
Identifier: 76817695
GI number: 76817695
Start: 36048
End: 37535
Strand: Direct
Name: 76817695
Synonym: BURPS1710b_A0015
Alternate gene names: NA
Gene position: 36048-37535 (Clockwise)
Preceding gene: 76818722
Following gene: 76819714
Centisome position: 1.13
GC content: 75.34
Gene sequence:
>1488_bases ATGCGCGCTGCTCGCGCTGATGCTGGCGGCGGGCTGCGCGTCCCCGGGCGACATGTCGCCGTCCGACCATGCGGCGCCGA TGGGCGGCTACGGCCGCGGCGGCGGCAGCGGCGGTGGCGGCGGCTATTGAACGACGGCGCCGCGCGTGAGCTTCGAATCG GACGTCGTCGGCTGGCTGCCGCAGTTGCGCCGCTATGCGCGCGCGCTGACGGGCGACCCCGCGTGGGCCGACGATCTCGT ACAGGACACCGTCGAGCGCGCGTTCTCGCGCATGCGCGCGTTCCGTCCCGACAGCAATCTGCGCGCGTGGCTGTTGACGA TCCTGCGCCATCTGTACATCGATCAGTTGCGCGCGCGCCGCGAATTCGCCGTCGACGACGACGAAGGCCCGTGGCGCACG CTCGAGGCGCCCGCCGGCCAGATCGACGCGCTCGTGCTGCGCGACGTGCAGCGAATGCTGTACCGGCTGCCGCTCGAGCA GCGCGAAGTGCTGCTGCTCGTCTGCGTCGAAGAGTTGAGCTATCAGGACGCGTCGGCGGTGCTCGGCGTGCCGGTCGGCA CCGTGATGTCGCGGCTGTCGCGCGCGCGGGAGCGCATGCGCGCGCTGCTGACCGACGCGCCGCTGCGGCCGCCGCTGTCC CTTACCGCTGCGAGACATCATCGATGAGCGACGATCCCGATCTTTGCGTTGCACCGGAATCCGACGAGCCGGGGCTCCTC GCGCTGTCGGCGTTCGTCGACGGCGAACTGCCGGACGCGCAGAGCCGCGCGATGGCCAGGCGGCTCGCGTCCGATCCGCG CGCGGCCGGCATCGCCGCGCACTATCGCGCGCAGCGTGCGGCGCTGCGCGCGCTGTTCGCCGATCCTGTCGCGCCGCGCC ACGGCCCGTGCGTCGCGTGGCCGGTGCGCACGCCGTGGTGGCGGCGCGCGGCGTTCGCGGGCGGCGCGCTGGCGGCGGGC GTCGCGCTCGGCTGGCTCGGCGGCGCGCTCGCGCCGCGGTTCGCGCCGTCCGCCGCGCTGCAATGGGTCGCGCCTGCGGC CGCGCAACGCGCGTTCGCGCGCGACGCCGATCTCGCCTACGCGCTCTACGCGCCCGATGCGCGGCACCCGGTCGAAATCG CCGCCGGCCGCGACGGCGCGCCGCTCGCGTGGCTGTCGGCGCGCGTCGGCCGCCGGATCGCCGCGCCGTCGCTCCGCGAG TACGGCTTCGCGCTGCTCGGCGCGCGGCTGCTGCCCGGCGCGGGCGGCCCCGCCGCGCAATTCATGTACGAAAACGCGGC AGGCGAGCGGCTCGCGCTGTACGTGAGCGCGTCCGCGCAGCGCGAGGCGGCGGTGCGGCCGTGGCGCGACGGCGGGCGGC ACACCTTCTACTGGGTCAGCGAGCGCACCGCGTACGCGCTCTCCGGCCAGCTCGACGAAGGCCGGCTGCGCACGATCGCG GCCGACGTCTGCGGCGAGCTCGGCGGCCATCCGCAGCGGTGGCGATAG
Upstream 100 bases:
>100_bases ACATGGGGCACCGCCCGCCGCGGCGCGCGCGCGACGCCCGGCCCCGACCGATGCGCCGCCCGGAGGCGGAAATGGAATCG ATACGGATGCTTTCAGCCGC
Downstream 100 bases:
>100_bases CGCGCGAGCCGAGGCGCGACGCCGAGGCCGAGGCCGTCGACGAGTCGATCATACGAGTCGAGCATGGATGCCGCCGGTTC ATTCGCAAGCTTCGCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Regulator; Transmembrane Transcriptional Regulator; Transmembrane Transcription Regulator
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MRAARADAGGGLRVPGRHVAVRPCGADGRLRPRRRQRRWRRLLNDGAARELRIGRRRLAAAVAPLCARADGRPRVGRRSR TGHRRARVLAHARVPSRQQSARVAVDDPAPSVHRSVARAPRIRRRRRRRPVAHARGARRPDRRARAARRAANAVPAAARA ARSAAARLRRRVELSGRVGGARRAGRHRDVAAVARAGAHARAADRRAAAAAAVPYRCETSSMSDDPDLCVAPESDEPGLL ALSAFVDGELPDAQSRAMARRLASDPRAAGIAAHYRAQRAALRALFADPVAPRHGPCVAWPVRTPWWRRAAFAGGALAAG VALGWLGGALAPRFAPSAALQWVAPAAAQRAFARDADLAYALYAPDARHPVEIAAGRDGAPLAWLSARVGRRIAAPSLRE YGFALLGARLLPGAGGPAAQFMYENAAGERLALYVSASAQREAAVRPWRDGGRHTFYWVSERTAYALSGQLDEGRLRTIA ADVCGELGGHPQRWR
Sequences:
>Translated_495_residues MRAARADAGGGLRVPGRHVAVRPCGADGRLRPRRRQRRWRRLLNDGAARELRIGRRRLAAAVAPLCARADGRPRVGRRSR TGHRRARVLAHARVPSRQQSARVAVDDPAPSVHRSVARAPRIRRRRRRRPVAHARGARRPDRRARAARRAANAVPAAARA ARSAAARLRRRVELSGRVGGARRAGRHRDVAAVARAGAHARAADRRAAAAAAVPYRCETSSMSDDPDLCVAPESDEPGLL ALSAFVDGELPDAQSRAMARRLASDPRAAGIAAHYRAQRAALRALFADPVAPRHGPCVAWPVRTPWWRRAAFAGGALAAG VALGWLGGALAPRFAPSAALQWVAPAAAQRAFARDADLAYALYAPDARHPVEIAAGRDGAPLAWLSARVGRRIAAPSLRE YGFALLGARLLPGAGGPAAQFMYENAAGERLALYVSASAQREAAVRPWRDGGRHTFYWVSERTAYALSGQLDEGRLRTIA ADVCGELGGHPQRWR >Mature_495_residues MRAARADAGGGLRVPGRHVAVRPCGADGRLRPRRRQRRWRRLLNDGAARELRIGRRRLAAAVAPLCARADGRPRVGRRSR TGHRRARVLAHARVPSRQQSARVAVDDPAPSVHRSVARAPRIRRRRRRRPVAHARGARRPDRRARAARRAANAVPAAARA ARSAAARLRRRVELSGRVGGARRAGRHRDVAAVARAGAHARAADRRAAAAAAVPYRCETSSMSDDPDLCVAPESDEPGLL ALSAFVDGELPDAQSRAMARRLASDPRAAGIAAHYRAQRAALRALFADPVAPRHGPCVAWPVRTPWWRRAAFAGGALAAG VALGWLGGALAPRFAPSAALQWVAPAAAQRAFARDADLAYALYAPDARHPVEIAAGRDGAPLAWLSARVGRRIAAPSLRE YGFALLGARLLPGAGGPAAQFMYENAAGERLALYVSASAQREAAVRPWRDGGRHTFYWVSERTAYALSGQLDEGRLRTIA ADVCGELGGHPQRWR
Specific function: Unknown
COG id: COG5662
COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53332; Mature: 53332
Theoretical pI: Translated: 12.39; Mature: 12.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAARADAGGGLRVPGRHVAVRPCGADGRLRPRRRQRRWRRLLNDGAARELRIGRRRLAA CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH AVAPLCARADGRPRVGRRSRTGHRRARVLAHARVPSRQQSARVAVDDPAPSVHRSVARAP HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCEEEECCCCCHHHHHHHHHH RIRRRRRRRPVAHARGARRPDRRARAARRAANAVPAAARAARSAAARLRRRVELSGRVGG HHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC ARRAGRHRDVAAVARAGAHARAADRRAAAAAAVPYRCETSSMSDDPDLCVAPESDEPGLL HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEE ALSAFVDGELPDAQSRAMARRLASDPRAAGIAAHYRAQRAALRALFADPVAPRHGPCVAW EEEEHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE PVRTPWWRRAAFAGGALAAGVALGWLGGALAPRFAPSAALQWVAPAAAQRAFARDADLAY CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE ALYAPDARHPVEIAAGRDGAPLAWLSARVGRRIAAPSLREYGFALLGARLLPGAGGPAAQ EEECCCCCCCEEEECCCCCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHHCCCCCCHHHH FMYENAAGERLALYVSASAQREAAVRPWRDGGRHTFYWVSERTAYALSGQLDEGRLRTIA HHHHCCCCCEEEEEEECCCCHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHHHH ADVCGELGGHPQRWR HHHHHHHCCCCCCCC >Mature Secondary Structure MRAARADAGGGLRVPGRHVAVRPCGADGRLRPRRRQRRWRRLLNDGAARELRIGRRRLAA CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH AVAPLCARADGRPRVGRRSRTGHRRARVLAHARVPSRQQSARVAVDDPAPSVHRSVARAP HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCEEEECCCCCHHHHHHHHHH RIRRRRRRRPVAHARGARRPDRRARAARRAANAVPAAARAARSAAARLRRRVELSGRVGG HHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC ARRAGRHRDVAAVARAGAHARAADRRAAAAAAVPYRCETSSMSDDPDLCVAPESDEPGLL HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEE ALSAFVDGELPDAQSRAMARRLASDPRAAGIAAHYRAQRAALRALFADPVAPRHGPCVAW EEEEHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE PVRTPWWRRAAFAGGALAAGVALGWLGGALAPRFAPSAALQWVAPAAAQRAFARDADLAY CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE ALYAPDARHPVEIAAGRDGAPLAWLSARVGRRIAAPSLREYGFALLGARLLPGAGGPAAQ EEECCCCCCCEEEECCCCCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHHCCCCCCHHHH FMYENAAGERLALYVSASAQREAAVRPWRDGGRHTFYWVSERTAYALSGQLDEGRLRTIA HHHHCCCCCEEEEEEECCCCHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHHHH ADVCGELGGHPQRWR HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA