Click here to switch to the map view.

The map label for this gene is ydjH [C]

Identifier: 75674417

GI number: 75674417

Start: 248739

End: 249740

Strand: Direct

Name: ydjH [C]

Synonym: Nwi_0218

Alternate gene names: 75674417

Gene position: 248739-249740 (Clockwise)

Preceding gene: 75674414

Following gene: 75674422

Centisome position: 7.31

GC content: 65.47

Gene sequence:

>1002_bases
ATGGCTGCAGCGAAATACGACGTGCTTGCGATCGGCAATGCGATTTTCGACGTTCTGGTGCGAACCGATGAGGGGTTTCT
CGCCGCCCACGGCATGACCAAGGGCGGAATGGCGTTGATCGACGAAGCGCGCGCGGCCTCGATCTATGCCGACATGGGGC
CTGCGACCGAAATGTCGGGCGGTTCGGCCGCGAACACCATCGTCGGTCTCGCGGGGTTCGGGGCCCGCACCGCCTATGTC
GGCAAGGTGAAGGATGACCAGATCGGCCGCCTCTATATTCACGATATTCGCGCCGCGAAGGTGGCCTTCGATACGCCGCC
GGCATCCGACGGTCCCGCCACCGGCTGTTCCTACATACTGGTGACGCCGGACGGCGAGCGCACCATGAATACCTATCTCG
GCGCGGCGCAGGATCTGTCGTCGGCCGATATCGATCCGGACGCCGTCGCGGCGTCGTCGATCCTCTATCTCGAAGGCTAT
CTGTGGGACCCCAAAGCCGCCAAGGAGGCGTTCCTGAAGGCCTCGCGGATCGCGCATGACGCCGGCCGGCAAGTCGCGCT
GACCCTGTCGGATGCGTTCTGCGTCGATCGCTATCGTGACGAGTTTCTTGCATTGATGCGCGACGGCACCGTCGATCTGA
TCTTCGCCAACGAGTCTGAACTGCACTCGCTCTACCAGACGTCCGACTTCGATACGGCGCTGGCCCAGCTACGCCAGGAC
ATCGCGCTCGGCGTCGTCACCCGCAGCGAGAAGGGCTGCGTGGTCGCGACGGAGGGCGGCGTTGTCGCGGTGCCGGCGTG
TCCGATCGACAATCTGGTCGATACCACGGGAGCCGGCGATCTGTTCGCGGCGGGGTTTCTGTTCGGACTGGTGCGCGGCG
CGAGCCACGAAGACGCGGGGCGGCTCGGCGCGCTCGCCGCCGCCGAGGTGATCCAGCACATCGGCGCGCGGCCGCAGGTG
TCGCTCAAGGAACTGGCGCAAGCGAATCGGCTGCCGGTATAG

Upstream 100 bases:

>100_bases
CTTGATGGCATGGAAGCGCCATGATAGGCGGCACCTTCACGGGCCGGGAGTCTGAGCGGATTCCTCACCATACCGCAATT
GCCGCGACGGGATATTTTTA

Downstream 100 bases:

>100_bases
GGGAGCGAAGCGCTCGATCCATGTTTTGACGCGTTGTCTGTCGGCGAATCGGTAATCCACTTCGCCGGAAAATGCTCTGA
AACGATCAGTTTTCCGGCAG

Product: PfkB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MAAAKYDVLAIGNAIFDVLVRTDEGFLAAHGMTKGGMALIDEARAASIYADMGPATEMSGGSAANTIVGLAGFGARTAYV
GKVKDDQIGRLYIHDIRAAKVAFDTPPASDGPATGCSYILVTPDGERTMNTYLGAAQDLSSADIDPDAVAASSILYLEGY
LWDPKAAKEAFLKASRIAHDAGRQVALTLSDAFCVDRYRDEFLALMRDGTVDLIFANESELHSLYQTSDFDTALAQLRQD
IALGVVTRSEKGCVVATEGGVVAVPACPIDNLVDTTGAGDLFAAGFLFGLVRGASHEDAGRLGALAAAEVIQHIGARPQV
SLKELAQANRLPV

Sequences:

>Translated_333_residues
MAAAKYDVLAIGNAIFDVLVRTDEGFLAAHGMTKGGMALIDEARAASIYADMGPATEMSGGSAANTIVGLAGFGARTAYV
GKVKDDQIGRLYIHDIRAAKVAFDTPPASDGPATGCSYILVTPDGERTMNTYLGAAQDLSSADIDPDAVAASSILYLEGY
LWDPKAAKEAFLKASRIAHDAGRQVALTLSDAFCVDRYRDEFLALMRDGTVDLIFANESELHSLYQTSDFDTALAQLRQD
IALGVVTRSEKGCVVATEGGVVAVPACPIDNLVDTTGAGDLFAAGFLFGLVRGASHEDAGRLGALAAAEVIQHIGARPQV
SLKELAQANRLPV
>Mature_332_residues
AAAKYDVLAIGNAIFDVLVRTDEGFLAAHGMTKGGMALIDEARAASIYADMGPATEMSGGSAANTIVGLAGFGARTAYVG
KVKDDQIGRLYIHDIRAAKVAFDTPPASDGPATGCSYILVTPDGERTMNTYLGAAQDLSSADIDPDAVAASSILYLEGYL
WDPKAAKEAFLKASRIAHDAGRQVALTLSDAFCVDRYRDEFLALMRDGTVDLIFANESELHSLYQTSDFDTALAQLRQDI
ALGVVTRSEKGCVVATEGGVVAVPACPIDNLVDTTGAGDLFAAGFLFGLVRGASHEDAGRLGALAAAEVIQHIGARPQVS
LKELAQANRLPV

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=281, Percent_Identity=26.3345195729537, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790193, Length=277, Percent_Identity=29.6028880866426, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322565, Length=331, Percent_Identity=26.8882175226586, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 34846; Mature: 34714

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAKYDVLAIGNAIFDVLVRTDEGFLAAHGMTKGGMALIDEARAASIYADMGPATEMSG
CCCCCCHHEEHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHEEEECCCCCCCCCC
GSAANTIVGLAGFGARTAYVGKVKDDQIGRLYIHDIRAAKVAFDTPPASDGPATGCSYIL
CCCHHHEEEECCCCCCEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEE
VTPDGERTMNTYLGAAQDLSSADIDPDAVAASSILYLEGYLWDPKAAKEAFLKASRIAHD
ECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHHH
AGRQVALTLSDAFCVDRYRDEFLALMRDGTVDLIFANESELHSLYQTSDFDTALAQLRQD
CCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHH
IALGVVTRSEKGCVVATEGGVVAVPACPIDNLVDTTGAGDLFAAGFLFGLVRGASHEDAG
HHEEEEEECCCCEEEEECCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCH
RLGALAAAEVIQHIGARPQVSLKELAQANRLPV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
AAAKYDVLAIGNAIFDVLVRTDEGFLAAHGMTKGGMALIDEARAASIYADMGPATEMSG
CCCCCHHEEHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHEEEECCCCCCCCCC
GSAANTIVGLAGFGARTAYVGKVKDDQIGRLYIHDIRAAKVAFDTPPASDGPATGCSYIL
CCCHHHEEEECCCCCCEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEE
VTPDGERTMNTYLGAAQDLSSADIDPDAVAASSILYLEGYLWDPKAAKEAFLKASRIAHD
ECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHHH
AGRQVALTLSDAFCVDRYRDEFLALMRDGTVDLIFANESELHSLYQTSDFDTALAQLRQD
CCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHH
IALGVVTRSEKGCVVATEGGVVAVPACPIDNLVDTTGAGDLFAAGFLFGLVRGASHEDAG
HHEEEEEECCCCEEEEECCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCH
RLGALAAAEVIQHIGARPQVSLKELAQANRLPV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]