| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is yiiP [C]
Identifier: 73542928
GI number: 73542928
Start: 3558869
End: 3559798
Strand: Reverse
Name: yiiP [C]
Synonym: Reut_A3245
Alternate gene names: 73542928
Gene position: 3559798-3558869 (Counterclockwise)
Preceding gene: 73542929
Following gene: 73542927
Centisome position: 93.52
GC content: 66.99
Gene sequence:
>930_bases ATGCCTATCCAGGACATTCCTTCCGGCCCGGGCGCCGACGCGCACGCCGATTACCTTGCTGGCCGGCGCAGCACGCTGGT CAGTGTCGCCGTCAATATCGGCCTGAGCGTGGCCCAGGCCGTGGCGGGTTTATGGGCAGGCTCGCAGGCGCTGCTGGCGG ACGCGCTGCATTCACTGTCGGACCTCCTGTCCGACTTCGTGGTGCTGCTGGCCGGACATCACGGCCGCAAGGGCCCGGAT GCCGATCACCAGTACGGCCATCGCCGTTACGAAACCGCCGCGTCGCTGCTGCTCGGCTGCTTGCTGCTCGCGGTGGGCGT CGGCATGCTATGGGCGGCGGTCGGCAAGATCCAGCATCCGCAGGGCGCGCAGGCGGTCAAGCCGATCGCGCTGTGGGTTG CCGTGGTGGCGTTGCTGTCCAAGGAACTGCTGTTTCGCTACATGCTGGCCGTCGCCAAGCGCGTGCGCTCCGGCATGCTG GTGGCCAATGCGTGGCACGCGCGCTCGGACGCCGCATCTTCGCTGGTGGTGGCGTTTGGCGTCGGCGGCAACCTGCTTGG CTATCACGTGCTGGATCCGGTCGCCGCAATCGTAGTGGGCCTGATGGTGTCGCGCATGGGCTGCAAGTTTGGCTGGGATG CGCTCAACGACCTGATGGACCGCGCCGCCGACACCGAGACCGTGGGCGCGATCCGGCAGACCATGCTCGAAACCCCGGGC GTACTCGGCGTGCACGACCTGCGCACGCGCAAGATGGGCGACCAGGTGCTGGTCGACGTGCATCTCGAGATCAACGCCAA CCTGACCGTGGCGGAAGGCCACGCGATCGCAGCGGAAGCACATCAACGCACGGTGGACCGCCACCACGTGCTGAGCGTGA TGACACACGTCGATCCCGTATACGCCCCTCCAAAGGAAGCCCGTAGCTGA
Upstream 100 bases:
>100_bases AGGCCCTGCGAGGCTTTACGCCGCAGGAGCAAGAGCAACTGATTGCACTGCTGCAGCGCGTGCGCGCCAATTTGGTCGAC GCCGTGGAGCGCTGAGTACG
Downstream 100 bases:
>100_bases GGGCCTGTGGATATCTTCGCCCTGCCCTGGGGATAACTGCATGGGAAGGCTGTGATCCGCCTGGGGGTGCACTGTGGGGC GTATACGTACAACGTTTACC
Product: cation efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPIQDIPSGPGADAHADYLAGRRSTLVSVAVNIGLSVAQAVAGLWAGSQALLADALHSLSDLLSDFVVLLAGHHGRKGPD ADHQYGHRRYETAASLLLGCLLLAVGVGMLWAAVGKIQHPQGAQAVKPIALWVAVVALLSKELLFRYMLAVAKRVRSGML VANAWHARSDAASSLVVAFGVGGNLLGYHVLDPVAAIVVGLMVSRMGCKFGWDALNDLMDRAADTETVGAIRQTMLETPG VLGVHDLRTRKMGDQVLVDVHLEINANLTVAEGHAIAAEAHQRTVDRHHVLSVMTHVDPVYAPPKEARS
Sequences:
>Translated_309_residues MPIQDIPSGPGADAHADYLAGRRSTLVSVAVNIGLSVAQAVAGLWAGSQALLADALHSLSDLLSDFVVLLAGHHGRKGPD ADHQYGHRRYETAASLLLGCLLLAVGVGMLWAAVGKIQHPQGAQAVKPIALWVAVVALLSKELLFRYMLAVAKRVRSGML VANAWHARSDAASSLVVAFGVGGNLLGYHVLDPVAAIVVGLMVSRMGCKFGWDALNDLMDRAADTETVGAIRQTMLETPG VLGVHDLRTRKMGDQVLVDVHLEINANLTVAEGHAIAAEAHQRTVDRHHVLSVMTHVDPVYAPPKEARS >Mature_308_residues PIQDIPSGPGADAHADYLAGRRSTLVSVAVNIGLSVAQAVAGLWAGSQALLADALHSLSDLLSDFVVLLAGHHGRKGPDA DHQYGHRRYETAASLLLGCLLLAVGVGMLWAAVGKIQHPQGAQAVKPIALWVAVVALLSKELLFRYMLAVAKRVRSGMLV ANAWHARSDAASSLVVAFGVGGNLLGYHVLDPVAAIVVGLMVSRMGCKFGWDALNDLMDRAADTETVGAIRQTMLETPGV LGVHDLRTRKMGDQVLVDVHLEINANLTVAEGHAIAAEAHQRTVDRHHVLSVMTHVDPVYAPPKEARS
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=275, Percent_Identity=25.8181818181818, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1786966, Length=244, Percent_Identity=26.2295081967213, Blast_Score=66, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6325032, Length=246, Percent_Identity=29.2682926829268, Blast_Score=113, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6323831, Length=226, Percent_Identity=29.2035398230088, Blast_Score=96, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 32735; Mature: 32604
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQDIPSGPGADAHADYLAGRRSTLVSVAVNIGLSVAQAVAGLWAGSQALLADALHSLS CCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH DLLSDFVVLLAGHHGRKGPDADHQYGHRRYETAASLLLGCLLLAVGVGMLWAAVGKIQHP HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QGAQAVKPIALWVAVVALLSKELLFRYMLAVAKRVRSGMLVANAWHARSDAASSLVVAFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHEEEEEC VGGNLLGYHVLDPVAAIVVGLMVSRMGCKFGWDALNDLMDRAADTETVGAIRQTMLETPG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC VLGVHDLRTRKMGDQVLVDVHLEINANLTVAEGHAIAAEAHQRTVDRHHVLSVMTHVDPV CCCHHHHHHHHCCCEEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC YAPPKEARS CCCCHHCCC >Mature Secondary Structure PIQDIPSGPGADAHADYLAGRRSTLVSVAVNIGLSVAQAVAGLWAGSQALLADALHSLS CCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH DLLSDFVVLLAGHHGRKGPDADHQYGHRRYETAASLLLGCLLLAVGVGMLWAAVGKIQHP HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QGAQAVKPIALWVAVVALLSKELLFRYMLAVAKRVRSGMLVANAWHARSDAASSLVVAFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHEEEEEC VGGNLLGYHVLDPVAAIVVGLMVSRMGCKFGWDALNDLMDRAADTETVGAIRQTMLETPG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC VLGVHDLRTRKMGDQVLVDVHLEINANLTVAEGHAIAAEAHQRTVDRHHVLSVMTHVDPV CCCHHHHHHHHCCCEEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC YAPPKEARS CCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]