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The map label for this gene is yrbD [C]

Identifier: 73542804

GI number: 73542804

Start: 3426166

End: 3426687

Strand: Reverse

Name: yrbD [C]

Synonym: Reut_A3120

Alternate gene names: 73542804

Gene position: 3426687-3426166 (Counterclockwise)

Preceding gene: 73542805

Following gene: 73542803

Centisome position: 90.02

GC content: 63.98

Gene sequence:

>522_bases
ATGAAAAAAAGTGCACTCGATTTCTGGGTGGGGCTGTTCGTGGTAGCAGGGTTTGTTGCCTTGCTGTTTCTTGCCCTGAA
GGTCGGCAACATGAGTGCCTTCACCTTCCAGGAAACCTACGCAGTCGAAGCCCGCTTCGACAACATCGGCGGCCTGAAGC
CGCGCGCGCCGGTCAAGAGCGCTGGCGTGGTGGTGGGGCGTGTGGCGGCGATCCGGTTCGATGACAAGACGTACCAGGCC
ACCGTGGTCATGAACCTGGAAAAGCAGTACCAGTTTCCGAAGGACTCCTCGGCCAAGATCCTGACGTCGGGCCTGCTGGG
CGAGCAGTACATCGGCCTGGAGGCCGGCGGCGATACCGCCATGCTGGCGCAGGGCTCGCGCATCACCATGACGCAGTCGG
CCGTGGTGCTCGAAAACCTGATCGGGCAGTTCCTGTACAACAAGGCTGCCGACGCCGGGGCCGGCGGGGCCAGCAGCGGT
GGTGCGGCGAGCGCGCCGGCTGTGGGCGGAGCCGGCAAATGA

Upstream 100 bases:

>100_bases
GGCCGTGCTTGGGCTGGATTTCCTGCTGACAGCGTTGATGTTCAGTTGATGGGCAACGCACCGGGCCAAACGGCAGGACA
ACGGGTAGAAAGAGATCCCA

Downstream 100 bases:

>100_bases
CCGTTCCTTCGTGCAAGCCGGCGGCCAGGCACGCTGTCCTGGCGTTGGCAGCTGGTGTCCTGATGGGGCTGGCGGGTTGC
GCCACCGGCCCGACCGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKKSALDFWVGLFVVAGFVALLFLALKVGNMSAFTFQETYAVEARFDNIGGLKPRAPVKSAGVVVGRVAAIRFDDKTYQA
TVVMNLEKQYQFPKDSSAKILTSGLLGEQYIGLEAGGDTAMLAQGSRITMTQSAVVLENLIGQFLYNKAADAGAGGASSG
GAASAPAVGGAGK

Sequences:

>Translated_173_residues
MKKSALDFWVGLFVVAGFVALLFLALKVGNMSAFTFQETYAVEARFDNIGGLKPRAPVKSAGVVVGRVAAIRFDDKTYQA
TVVMNLEKQYQFPKDSSAKILTSGLLGEQYIGLEAGGDTAMLAQGSRITMTQSAVVLENLIGQFLYNKAADAGAGGASSG
GAASAPAVGGAGK
>Mature_173_residues
MKKSALDFWVGLFVVAGFVALLFLALKVGNMSAFTFQETYAVEARFDNIGGLKPRAPVKSAGVVVGRVAAIRFDDKTYQA
TVVMNLEKQYQFPKDSSAKILTSGLLGEQYIGLEAGGDTAMLAQGSRITMTQSAVVLENLIGQFLYNKAADAGAGGASSG
GAASAPAVGGAGK

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=173, Percent_Identity=46.242774566474, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 17920; Mature: 17920

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSALDFWVGLFVVAGFVALLFLALKVGNMSAFTFQETYAVEARFDNIGGLKPRAPVKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHEEEEEEECCCCCCCCCCCCCC
AGVVVGRVAAIRFDDKTYQATVVMNLEKQYQFPKDSSAKILTSGLLGEQYIGLEAGGDTA
CCEEEEEEEEEEECCCCEEEEEEEEEHHHCCCCCCCCCHHHHHCCCCCCEEEEECCCCEE
MLAQGSRITMTQSAVVLENLIGQFLYNKAADAGAGGASSGGAASAPAVGGAGK
EEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKSALDFWVGLFVVAGFVALLFLALKVGNMSAFTFQETYAVEARFDNIGGLKPRAPVKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHEEEEEEECCCCCCCCCCCCCC
AGVVVGRVAAIRFDDKTYQATVVMNLEKQYQFPKDSSAKILTSGLLGEQYIGLEAGGDTA
CCEEEEEEEEEEECCCCEEEEEEEEEHHHCCCCCCCCCHHHHHCCCCCCEEEEECCCCEE
MLAQGSRITMTQSAVVLENLIGQFLYNKAADAGAGGASSGGAASAPAVGGAGK
EEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]