| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is hisD
Identifier: 73542795
GI number: 73542795
Start: 3418292
End: 3419629
Strand: Reverse
Name: hisD
Synonym: Reut_A3111
Alternate gene names: 73542795
Gene position: 3419629-3418292 (Counterclockwise)
Preceding gene: 73542796
Following gene: 73542794
Centisome position: 89.84
GC content: 66.89
Gene sequence:
>1338_bases ATGAACGCAACCGAAATGGAAAACGTGTCGATCCGCCGGCTCGATTCAAGCGATCCGCGCTTCGCGCAAGCGCTGCGCGA GGTGCTGGCCTTCGAGGCCGGCGAGGACGAGGCCATCGACCGCGCCGTGGCGCAGATCCTGGCCGACGTGAAGGATCGCG GCGACGCCGCGGTACTCGAATACACGCAGCGGTTTGACCGGGTCGAGGCGGCGTCGATGGGCGCGCTGGAAATCTCGCAA AGCGAACTCGAAGCTGCGCTCGAAGACCTGGAGCCGAAGCGCCGCGCCGCGCTGGAAGCCGCCGCCGCGCGCGTGCGTGC CTACCACGAGAAGCAGAAGATCGAATGCGGCAGTCATAGCTGGGAATACACCGAGGCCGATGGCACCATGCTGGGCCAGA AGGTGACGCCGCTGGACCGCGTCGGCATCTACGTGCCGGGCGGCAAGGCCGCGTACCCGTCGTCGGTGCTGATGAATGCG ATTCCCGCGCGCGTCGCGGGCGTCAAGGAAATCATCATGGTCGTGCCCACGCCGGGCGGCGTGCGCAATGAACTGGTGCT GGCGGCTGCGCAGATCGCTGGTGTCGACCGCGTGTTCACCATCGGCGGCGCGCAGGCGGTTGGCGCGCTGGCCTACGGTA CGGCGACGCTGCCGCAGGTCGACAAGATCGTCGGCCCCGGCAACGCCTATGTGGCCGCAGCCAAGCGCCGCGTGTTCGGC ACCGTGGGCATCGACATGATCGCCGGCCCGTCGGAGATCCTGGTGATCTGCGACGGTACGACTGATCCGGACTGGGTGGC GATGGACCTGTTCTCGCAGGCCGAGCACGATGAACTCGCGCAGTCGATCCTGCTGTGCCCGGACGCCGACTACATCGCGC AGGTCGAGGCAAGTATCCAGCGCCAGCTCGACAGCATGCCACGCCGCGAGGTGATCGCCGCATCGATTTCAGGCCGTGGC GCGCTGATCAAGGTGCGCGACATGGAAGAAGCTTGCGAGATCGCCAACGCGATCGCGCCCGAGCACCTCGAGATCTCGGC CGAGAACCCGCGCCAGTGGAGCGAGAAGATCCGCCACGCCGGCGCCATTTTCCTGGGTCGCTATACCAGCGAGTCGCTCG GCGACTACTGCGCGGGGCCGAACCACGTGCTGCCGACTTCGCGCACCGCTCGCTTCTCGTCGCCGCTGGGCGTGTACGAC TTCCAGAAGCGTTCAAGCCTGATCGAGGTCAGCGAGGGCGGGGCGCAGATGCTGGGCCAGATCGCGGCCGAACTTGCATA TGGCGAAGGCCTGCAGGCCCACGCGCGCAGCGCCGAGTACCGTTTCAAGCGTAGTTGA
Upstream 100 bases:
>100_bases CTGAAGCTCAAGCGCGAACGGCTGACGCCGATTCTCGACGCGTTCGAGAAGGCATCGGCGGCGCTGGCCTGAGGCCTGCG TCCCAGATAGGAATGGAGTC
Downstream 100 bases:
>100_bases ACCCATTGCTGCCGCAGCGTTGCGGCAGCCCATACAGGAGCATCCATGTCAGTCGTAGACCCTTCCCTGATCGAGCGAAT CATCCGTGACGACGTGCGCG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH 1
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MNATEMENVSIRRLDSSDPRFAQALREVLAFEAGEDEAIDRAVAQILADVKDRGDAAVLEYTQRFDRVEAASMGALEISQ SELEAALEDLEPKRRAALEAAAARVRAYHEKQKIECGSHSWEYTEADGTMLGQKVTPLDRVGIYVPGGKAAYPSSVLMNA IPARVAGVKEIIMVVPTPGGVRNELVLAAAQIAGVDRVFTIGGAQAVGALAYGTATLPQVDKIVGPGNAYVAAAKRRVFG TVGIDMIAGPSEILVICDGTTDPDWVAMDLFSQAEHDELAQSILLCPDADYIAQVEASIQRQLDSMPRREVIAASISGRG ALIKVRDMEEACEIANAIAPEHLEISAENPRQWSEKIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYD FQKRSSLIEVSEGGAQMLGQIAAELAYGEGLQAHARSAEYRFKRS
Sequences:
>Translated_445_residues MNATEMENVSIRRLDSSDPRFAQALREVLAFEAGEDEAIDRAVAQILADVKDRGDAAVLEYTQRFDRVEAASMGALEISQ SELEAALEDLEPKRRAALEAAAARVRAYHEKQKIECGSHSWEYTEADGTMLGQKVTPLDRVGIYVPGGKAAYPSSVLMNA IPARVAGVKEIIMVVPTPGGVRNELVLAAAQIAGVDRVFTIGGAQAVGALAYGTATLPQVDKIVGPGNAYVAAAKRRVFG TVGIDMIAGPSEILVICDGTTDPDWVAMDLFSQAEHDELAQSILLCPDADYIAQVEASIQRQLDSMPRREVIAASISGRG ALIKVRDMEEACEIANAIAPEHLEISAENPRQWSEKIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYD FQKRSSLIEVSEGGAQMLGQIAAELAYGEGLQAHARSAEYRFKRS >Mature_445_residues MNATEMENVSIRRLDSSDPRFAQALREVLAFEAGEDEAIDRAVAQILADVKDRGDAAVLEYTQRFDRVEAASMGALEISQ SELEAALEDLEPKRRAALEAAAARVRAYHEKQKIECGSHSWEYTEADGTMLGQKVTPLDRVGIYVPGGKAAYPSSVLMNA IPARVAGVKEIIMVVPTPGGVRNELVLAAAQIAGVDRVFTIGGAQAVGALAYGTATLPQVDKIVGPGNAYVAAAKRRVFG TVGIDMIAGPSEILVICDGTTDPDWVAMDLFSQAEHDELAQSILLCPDADYIAQVEASIQRQLDSMPRREVIAASISGRG ALIKVRDMEEACEIANAIAPEHLEISAENPRQWSEKIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYD FQKRSSLIEVSEGGAQMLGQIAAELAYGEGLQAHARSAEYRFKRS
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=410, Percent_Identity=41.9512195121951, Blast_Score=301, Evalue=7e-83, Organism=Saccharomyces cerevisiae, GI6319819, Length=415, Percent_Identity=36.144578313253, Blast_Score=248, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX1_CUPPJ (Q46WL2)
Other databases:
- EMBL: CP000090 - RefSeq: YP_297315.1 - ProteinModelPortal: Q46WL2 - SMR: Q46WL2 - GeneID: 3611937 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A3111 - NMPDR: fig|264198.3.peg.3551 - HOGENOM: HBG329596 - OMA: LDAHKNA - ProtClustDB: PRK00877 - BioCyc: REUT264198:REUT_A3111-MONOMER - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 47889; Mature: 47889
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 341-341 ACT_SITE 342-342 BINDING 144-144 BINDING 205-205 BINDING 228-228 BINDING 251-251 BINDING 273-273 BINDING 276-276 BINDING 342-342 BINDING 375-375 BINDING 429-429 BINDING 434-434
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATEMENVSIRRLDSSDPRFAQALREVLAFEAGEDEAIDRAVAQILADVKDRGDAAVLE CCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH YTQRFDRVEAASMGALEISQSELEAALEDLEPKRRAALEAAAARVRAYHEKQKIECGSHS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WEYTEADGTMLGQKVTPLDRVGIYVPGGKAAYPSSVLMNAIPARVAGVKEIIMVVPTPGG CEEECCCCCCCCCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCC VRNELVLAAAQIAGVDRVFTIGGAQAVGALAYGTATLPQVDKIVGPGNAYVAAAKRRVFG CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHE TVGIDMIAGPSEILVICDGTTDPDWVAMDLFSQAEHDELAQSILLCPDADYIAQVEASIQ ECCHHEECCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH RQLDSMPRREVIAASISGRGALIKVRDMEEACEIANAIAPEHLEISAENPRQWSEKIRHA HHHHCCCHHHHHEEECCCCCCEEEEECHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHC GAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFQKRSSLIEVSEGGAQMLGQ CEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCHHHHHHH IAAELAYGEGLQAHARSAEYRFKRS HHHHHHHCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MNATEMENVSIRRLDSSDPRFAQALREVLAFEAGEDEAIDRAVAQILADVKDRGDAAVLE CCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH YTQRFDRVEAASMGALEISQSELEAALEDLEPKRRAALEAAAARVRAYHEKQKIECGSHS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WEYTEADGTMLGQKVTPLDRVGIYVPGGKAAYPSSVLMNAIPARVAGVKEIIMVVPTPGG CEEECCCCCCCCCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCC VRNELVLAAAQIAGVDRVFTIGGAQAVGALAYGTATLPQVDKIVGPGNAYVAAAKRRVFG CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHE TVGIDMIAGPSEILVICDGTTDPDWVAMDLFSQAEHDELAQSILLCPDADYIAQVEASIQ ECCHHEECCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH RQLDSMPRREVIAASISGRGALIKVRDMEEACEIANAIAPEHLEISAENPRQWSEKIRHA HHHHCCCHHHHHEEECCCCCCEEEEECHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHC GAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFQKRSSLIEVSEGGAQMLGQ CEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCHHHHHHH IAAELAYGEGLQAHARSAEYRFKRS HHHHHHHCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA