| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is murF [H]
Identifier: 73542667
GI number: 73542667
Start: 3272796
End: 3274196
Strand: Reverse
Name: murF [H]
Synonym: Reut_A2983
Alternate gene names: 73542667
Gene position: 3274196-3272796 (Counterclockwise)
Preceding gene: 73542668
Following gene: 73542666
Centisome position: 86.02
GC content: 68.88
Gene sequence:
>1401_bases ATGAGCGATTCCAAGATGACGAATTTGCAGGAAGCCGCCGGCTGGATTGCCGGCGCGCGTGTTCTGGGCGATGGCACGCA GGCGTTTGCCCGCGTGCATACCGACAGTCGTACGGTCGAGCCGGGCGACCTGTTTGTCGCGCTCAAGGGTGAGCGCTTCG ACGCGCACGATTTCATCGCCGACGTGGTGGCACGCGGTGCTGTCGCCGTACTGGTGAGCCGCGACGTCGATGCCGGCGTG CCGGCCATCGTCGCGCCGGATACGCGCATTGCGCTCGGCGAACTCGGCGCCGGCTGGCGTCGGCAGTTCACGTTGCCGGC CGTCGCGGTGACGGGCAGCAACGGCAAGACCACGGTCAAGGAAATGATCGCGGCGATCTTCGCGGCGGCGGTGGGTGAAG ACCAGCGCCTGGCCACGGGCGGCAACCTGAACAATGATATCGGCCTGCCGCTGACGGTGCTGCGCCTGCGCGCGACGCAC CGGCTGGCCGTGCTTGAACTGGGCATGAACCATCCGGGCGAGACGGTCTACCTGGCCGGCATCGCCCAGCCGACGGTGGC GGTCGTCACCAATGCGCAGCGAGAACATCAGGAATTCATGGTCAGCGTGGAAGCTGTCGCCCACGAGCATGCCGCGGCCA TTGCCGCGCTGCCTGCCGATGGCGTGGCCGTGTTCCCGCTCGACGAAGAAAGCGGCGGCCAGCATGCCGCGATCTGGCGC GCAGCTGCCGGTACGCGGCGCGTGCTCAGCTTCGGCACCGCGGGCGAGGCCGACGTGCAGGCCACGGTGGCGCTCGTCGA CGGCGTGCAGGTGATGCAGGTCCGCGCGCCGGGCCATGCATTCGAGGTGCACCTCGGCCTGCTCGGCACGCACAACGTTC GCAACGCGCTCGCGGCTACCGCCTGCGCGCTGGCGGCCGGCGTGCAGGTGCCGGCTATCCAGCAAGGACTGGCGGCATTC AAGGCTGTCAAAGGCCGGCTGCAGGTCAAGCACACGCCGGGTGGCACCGTGGTGATCGACGACACCTACAACGCCAACCC CGATTCCATGCGCGCCGCGATCGACGTGCTGGCCGGGTTTGCCGCGCCGCGCCTGCTGGTGATCGGCGACATGGGCGAGG TCGGGGACCAGGGGCCGGCGTTCCACACGGAAATCGGCGGCTATGCGCAGGCGCTCGGCATCGAAGCGTTGTGGGCGACG GGCGAACTGGCCACGCATGCCGTGCAGGCATTCGGTGCGCAAGGCAGGCATTTCGAACGGGCGGCGGATCTCGCCCGGGC GCTGGAGGAAGACGCAGGGGGCACGGTGGCGAAGGCTGGCGCCGTGCTGGTGAAGGGATCGCGCTTCATGCGCATGGAAC GGATGGTGGCTGCGCTGGTCGCAGACACTCCCGCTCACTAG
Upstream 100 bases:
>100_bases GCAAGGGCCACGAGGCCACGCAGGAAGCCCATGGCCGCAAGCGGCCGTTCTCGGACCGCGAGCATGTACGCCTGGCCCTC GCCGCGCGGGGGGTATCGGC
Downstream 100 bases:
>100_bases ATAAGTAGAACACGATGTTATTGGCTCTGGCCCAGTGGCTGCAAAACGATTACAGCTTCCTTCGGGTCGTCAACTACCTG ACCTTCCGCGCGGTGATGGC
Product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
Products: NA
Alternate protein names: D-alanyl-D-alanine-adding enzyme; UDP-MurNAc-pentapeptide synthetase [H]
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSDSKMTNLQEAAGWIAGARVLGDGTQAFARVHTDSRTVEPGDLFVALKGERFDAHDFIADVVARGAVAVLVSRDVDAGV PAIVAPDTRIALGELGAGWRRQFTLPAVAVTGSNGKTTVKEMIAAIFAAAVGEDQRLATGGNLNNDIGLPLTVLRLRATH RLAVLELGMNHPGETVYLAGIAQPTVAVVTNAQREHQEFMVSVEAVAHEHAAAIAALPADGVAVFPLDEESGGQHAAIWR AAAGTRRVLSFGTAGEADVQATVALVDGVQVMQVRAPGHAFEVHLGLLGTHNVRNALAATACALAAGVQVPAIQQGLAAF KAVKGRLQVKHTPGGTVVIDDTYNANPDSMRAAIDVLAGFAAPRLLVIGDMGEVGDQGPAFHTEIGGYAQALGIEALWAT GELATHAVQAFGAQGRHFERAADLARALEEDAGGTVAKAGAVLVKGSRFMRMERMVAALVADTPAH
Sequences:
>Translated_466_residues MSDSKMTNLQEAAGWIAGARVLGDGTQAFARVHTDSRTVEPGDLFVALKGERFDAHDFIADVVARGAVAVLVSRDVDAGV PAIVAPDTRIALGELGAGWRRQFTLPAVAVTGSNGKTTVKEMIAAIFAAAVGEDQRLATGGNLNNDIGLPLTVLRLRATH RLAVLELGMNHPGETVYLAGIAQPTVAVVTNAQREHQEFMVSVEAVAHEHAAAIAALPADGVAVFPLDEESGGQHAAIWR AAAGTRRVLSFGTAGEADVQATVALVDGVQVMQVRAPGHAFEVHLGLLGTHNVRNALAATACALAAGVQVPAIQQGLAAF KAVKGRLQVKHTPGGTVVIDDTYNANPDSMRAAIDVLAGFAAPRLLVIGDMGEVGDQGPAFHTEIGGYAQALGIEALWAT GELATHAVQAFGAQGRHFERAADLARALEEDAGGTVAKAGAVLVKGSRFMRMERMVAALVADTPAH >Mature_465_residues SDSKMTNLQEAAGWIAGARVLGDGTQAFARVHTDSRTVEPGDLFVALKGERFDAHDFIADVVARGAVAVLVSRDVDAGVP AIVAPDTRIALGELGAGWRRQFTLPAVAVTGSNGKTTVKEMIAAIFAAAVGEDQRLATGGNLNNDIGLPLTVLRLRATHR LAVLELGMNHPGETVYLAGIAQPTVAVVTNAQREHQEFMVSVEAVAHEHAAAIAALPADGVAVFPLDEESGGQHAAIWRA AAGTRRVLSFGTAGEADVQATVALVDGVQVMQVRAPGHAFEVHLGLLGTHNVRNALAATACALAAGVQVPAIQQGLAAFK AVKGRLQVKHTPGGTVVIDDTYNANPDSMRAAIDVLAGFAAPRLLVIGDMGEVGDQGPAFHTEIGGYAQALGIEALWATG ELATHAVQAFGAQGRHFERAADLARALEEDAGGTVAKAGAVLVKGSRFMRMERMVAALVADTPAH
Specific function: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein [H]
COG id: COG0770
COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786274, Length=431, Percent_Identity=41.0672853828306, Blast_Score=261, Evalue=5e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005863 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.10 [H]
Molecular weight: Translated: 48254; Mature: 48123
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSKMTNLQEAAGWIAGARVLGDGTQAFARVHTDSRTVEPGDLFVALKGERFDAHDFIA CCCCHHCCHHHHHHHHHHHEEECCCHHHHHEEECCCCCCCCCCEEEEEECCCCCHHHHHH DVVARGAVAVLVSRDVDAGVPAIVAPDTRIALGELGAGWRRQFTLPAVAVTGSNGKTTVK HHHHCCEEEEEEECCCCCCCCEEECCCCEEEHHHCCCCCCEEEECCEEEEECCCCCHHHH EMIAAIFAAAVGEDQRLATGGNLNNDIGLPLTVLRLRATHRLAVLELGMNHPGETVYLAG HHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEE IAQPTVAVVTNAQREHQEFMVSVEAVAHEHAAAIAALPADGVAVFPLDEESGGQHAAIWR CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCEEEEEE AAAGTRRVLSFGTAGEADVQATVALVDGVQVMQVRAPGHAFEVHLGLLGTHNVRNALAAT CCCCCHHHEEECCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHH ACALAAGVQVPAIQQGLAAFKAVKGRLQVKHTPGGTVVIDDTYNANPDSMRAAIDVLAGF HHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHH AAPRLLVIGDMGEVGDQGPAFHTEIGGYAQALGIEALWATGELATHAVQAFGAQGRHFER CCCEEEEEECCCCCCCCCCCCHHHHCCHHHHHCCCEEECCCHHHHHHHHHHCCCCCHHHH AADLARALEEDAGGTVAKAGAVLVKGSRFMRMERMVAALVADTPAH HHHHHHHHHHCCCCCEECCCEEEEECHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDSKMTNLQEAAGWIAGARVLGDGTQAFARVHTDSRTVEPGDLFVALKGERFDAHDFIA CCCHHCCHHHHHHHHHHHEEECCCHHHHHEEECCCCCCCCCCEEEEEECCCCCHHHHHH DVVARGAVAVLVSRDVDAGVPAIVAPDTRIALGELGAGWRRQFTLPAVAVTGSNGKTTVK HHHHCCEEEEEEECCCCCCCCEEECCCCEEEHHHCCCCCCEEEECCEEEEECCCCCHHHH EMIAAIFAAAVGEDQRLATGGNLNNDIGLPLTVLRLRATHRLAVLELGMNHPGETVYLAG HHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEE IAQPTVAVVTNAQREHQEFMVSVEAVAHEHAAAIAALPADGVAVFPLDEESGGQHAAIWR CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCEEEEEE AAAGTRRVLSFGTAGEADVQATVALVDGVQVMQVRAPGHAFEVHLGLLGTHNVRNALAAT CCCCCHHHEEECCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHH ACALAAGVQVPAIQQGLAAFKAVKGRLQVKHTPGGTVVIDDTYNANPDSMRAAIDVLAGF HHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHH AAPRLLVIGDMGEVGDQGPAFHTEIGGYAQALGIEALWATGELATHAVQAFGAQGRHFER CCCEEEEEECCCCCCCCCCCCHHHHCCHHHHHCCCEEECCCHHHHHHHHHHCCCCCHHHH AADLARALEEDAGGTVAKAGAVLVKGSRFMRMERMVAALVADTPAH HHHHHHHHHHCCCCCEECCCEEEEECHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]