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The map label for this gene is secF [H]

Identifier: 73542496

GI number: 73542496

Start: 3082007

End: 3082978

Strand: Direct

Name: secF [H]

Synonym: Reut_A2811

Alternate gene names: 73542496

Gene position: 3082007-3082978 (Clockwise)

Preceding gene: 73542495

Following gene: 73542505

Centisome position: 80.97

GC content: 61.32

Gene sequence:

>972_bases
ATGGAATTCTTCCGCATCCGGCGCGACATTCCGTTCATGAAGCACGCGTTGATCTTCAACGTGGTCTCCTTCCTGACGTT
TGCCGCGGCCGTATTCTTCCTGTGGCACAAGGGCTTGCACCTGTCGATCGAATTCACCGGCGGTACGGTGATGGAGGTCA
ACTACCAGCAGGCCGCCGATCTCGAAAAGATCCGCGGCCAGGTGGGCAAGCTCGGCTATACCGACGTGCAGGTGCAGAAC
TTCGGCACCTCGCGCGACGTCATGATCCGCCTGCCGCTGCAGAAGGGTCCGGACGGCAAGCAAGTGACGTCGGCCCAGCA
GAGCGAACAGGTCATGGGCGCACTGCAGGCCGCCACGCCTGACGTGAAGCTGCAACGCGTCGAGTTCGTCGGCCCGCAGG
TCGGCAAGGAACTGGCGACCGATGGCCTGCTGGCGCTGCTGTGCGTGGTCATCGGCATCGTGATCTACTTGTCGTTCCGC
TTCGAGTGGAAGTTCGCGGTGGCGGGCATCATCGCCAACCTGCACGACGTGGTGATCATCCTGGGCTTCTTCGCGTTCTT
CCAGTGGGAATTCTCGCTGTCGGTGCTGGCGGCCATCCTGGCGGTGCTCGGATACTCGGTGAACGAATCCGTCGTGATCT
TTGACCGGATCCGCGAAGCCTTCCGCAAGTACCGCAAGATGACCACGCACGAAGTCATCGACCACGCCATTACGAGCACG
ATGTCGCGGACCATCATCACCCACGGCTCGACCGAAATGATGGTGCTGTCGATGTTCTTCTTCGGCGGCCCCACCCTGCA
CTACTTCGCGCTCGCGCTGACGGTCGGTATCCTGTTCGGCATCTACTCGTCGGTGTTCGTTGCCGCGGCGTTGGCCATGT
GGTTCGGTGTCAAGCGCGAGGACCTGATCAAAGGCGAGAAGAAGGCTGGTGGTACGGATCGCGATGATCCGAACTTCGGG
GCGCAGGCCTGA

Upstream 100 bases:

>100_bases
CCGCAAGAAGAAGCTGCAGAGCGTGGCCATCGGCCAGATCTGGAAACCGGGTGCGGACTCCCCGGTCGCCAAGTAAGCAC
CGATTCATCAGGACAACATC

Downstream 100 bases:

>100_bases
AGCCGGCCTGATGTCCAAATAAAAAAGCGCACCAGCCGGTGCGCTTTTTTGTTGCCCGCGGTAGCAAGTCGCTCAAGCCA
ATTCAGAAAACCGCTCGATC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MEFFRIRRDIPFMKHALIFNVVSFLTFAAAVFFLWHKGLHLSIEFTGGTVMEVNYQQAADLEKIRGQVGKLGYTDVQVQN
FGTSRDVMIRLPLQKGPDGKQVTSAQQSEQVMGALQAATPDVKLQRVEFVGPQVGKELATDGLLALLCVVIGIVIYLSFR
FEWKFAVAGIIANLHDVVIILGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYRKMTTHEVIDHAITST
MSRTIITHGSTEMMVLSMFFFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWFGVKREDLIKGEKKAGGTDRDDPNFG
AQA

Sequences:

>Translated_323_residues
MEFFRIRRDIPFMKHALIFNVVSFLTFAAAVFFLWHKGLHLSIEFTGGTVMEVNYQQAADLEKIRGQVGKLGYTDVQVQN
FGTSRDVMIRLPLQKGPDGKQVTSAQQSEQVMGALQAATPDVKLQRVEFVGPQVGKELATDGLLALLCVVIGIVIYLSFR
FEWKFAVAGIIANLHDVVIILGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYRKMTTHEVIDHAITST
MSRTIITHGSTEMMVLSMFFFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWFGVKREDLIKGEKKAGGTDRDDPNFG
AQA
>Mature_323_residues
MEFFRIRRDIPFMKHALIFNVVSFLTFAAAVFFLWHKGLHLSIEFTGGTVMEVNYQQAADLEKIRGQVGKLGYTDVQVQN
FGTSRDVMIRLPLQKGPDGKQVTSAQQSEQVMGALQAATPDVKLQRVEFVGPQVGKELATDGLLALLCVVIGIVIYLSFR
FEWKFAVAGIIANLHDVVIILGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYRKMTTHEVIDHAITST
MSRTIITHGSTEMMVLSMFFFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWFGVKREDLIKGEKKAGGTDRDDPNFG
AQA

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=294, Percent_Identity=39.1156462585034, Blast_Score=247, Evalue=8e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35972; Mature: 35972

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFRIRRDIPFMKHALIFNVVSFLTFAAAVFFLWHKGLHLSIEFTGGTVMEVNYQQAAD
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECHHHHHH
LEKIRGQVGKLGYTDVQVQNFGTSRDVMIRLPLQKGPDGKQVTSAQQSEQVMGALQAATP
HHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC
DVKLQRVEFVGPQVGKELATDGLLALLCVVIGIVIYLSFRFEWKFAVAGIIANLHDVVII
CCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYRKMTTHEVIDHAITST
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSRTIITHGSTEMMVLSMFFFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWFGVKRE
HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DLIKGEKKAGGTDRDDPNFGAQA
HHHCCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEFFRIRRDIPFMKHALIFNVVSFLTFAAAVFFLWHKGLHLSIEFTGGTVMEVNYQQAAD
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECHHHHHH
LEKIRGQVGKLGYTDVQVQNFGTSRDVMIRLPLQKGPDGKQVTSAQQSEQVMGALQAATP
HHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC
DVKLQRVEFVGPQVGKELATDGLLALLCVVIGIVIYLSFRFEWKFAVAGIIANLHDVVII
CCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYRKMTTHEVIDHAITST
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSRTIITHGSTEMMVLSMFFFGGPTLHYFALALTVGILFGIYSSVFVAAALAMWFGVKRE
HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DLIKGEKKAGGTDRDDPNFGAQA
HHHCCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]