Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73542482
Identifier: 73542482
GI number: 73542482
Start: 3066825
End: 3067514
Strand: Direct
Name: 73542482
Synonym: Reut_A2797
Alternate gene names: NA
Gene position: 3066825-3067514 (Clockwise)
Preceding gene: 73542481
Following gene: 73542486
Centisome position: 80.57
GC content: 68.12
Gene sequence:
>690_bases ATGAGCCGCCGCGCCGACCGCCTGTTCCAGATCGTCCAGGTCCTGCGCGGGCGCCGCCTGACCACGGCGGCGTTGCTCGC GCAGCGGCTCGGCGTGTCCGAGCGCACGGTCTACCGTGATATCCAGGCGCTGTCGCTGTCGGGCGTGCCGGTCGAGGGCG AGGCCGGTATTGGCTATCGGCTGCGTGCCGATTTCGATGTCCCGCCGCTGATGTTCACCGCCCTCGAAGTCGAAGCGCTG GTGGCCGGCCTTCGCCTGCTCAAGGCCTGGGGCGGTGGTGCGCTCGCGGCCGCCGCCGACCCCGCGCTGGAAAAGCTGAT GGCAGCTCTGCCGCCGCCACGCCGGCTAGCTGCGCAGCAAAGCCGCGTGTTCGCGCCGGAGTATGTCAATCGCGCGCAGG TACGTGAGGCATTCGACGTCGTGCACGGCGCGCTTGGGTCGCAAAGGCTTCTGCTGCTTGACTATTGTGATGCCGAACAG CGCATCACCGAACGCGTGGTGCAGCCGCTCGGCCTGTTTTTCTGGGGCAATGCATGGCTGCTGGCGGCATGGTGCACGAC GCGCACCGACTACCGCAGTTTTCGCCTGGACCGCTGCCGCGAAATCCGCATGCTCGACGACCGCTTCCACGAAACGCCGG ACCGCTCGCTCAACGGCTTTCTGCGCGCGGTGCGGGCCAGTGGCGTATAG
Upstream 100 bases:
>100_bases GGCGACATCGGCCGCATCGCGCATATCGCCGACAGCGAGGGCAACCGCATCGGCCTGCACGAGCCGTTCACGGGCTAATG CCCGCCATACCGGAGGACCG
Downstream 100 bases:
>100_bases CGTGTTTCAGGCAGCCGGATCGGCCAGCAGCGTTTCGATATCCGCGCGGATCTCTTCCGGCTTGGTGATCGACCCGTAGC GCTTGTAGACCGTGCCGTCA
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; DeoR-Family Transcriptional Regulator; HTH Domain Family; Repressor Transcription Regulator Protein; DeoR Family Transriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; HTH Domain Protein; Bacterial Regulatory Protein DeoR Family; Transriptional Regulator DeoR Family; NB-Dependent Receptor
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSRRADRLFQIVQVLRGRRLTTAALLAQRLGVSERTVYRDIQALSLSGVPVEGEAGIGYRLRADFDVPPLMFTALEVEAL VAGLRLLKAWGGGALAAAADPALEKLMAALPPPRRLAAQQSRVFAPEYVNRAQVREAFDVVHGALGSQRLLLLDYCDAEQ RITERVVQPLGLFFWGNAWLLAAWCTTRTDYRSFRLDRCREIRMLDDRFHETPDRSLNGFLRAVRASGV
Sequences:
>Translated_229_residues MSRRADRLFQIVQVLRGRRLTTAALLAQRLGVSERTVYRDIQALSLSGVPVEGEAGIGYRLRADFDVPPLMFTALEVEAL VAGLRLLKAWGGGALAAAADPALEKLMAALPPPRRLAAQQSRVFAPEYVNRAQVREAFDVVHGALGSQRLLLLDYCDAEQ RITERVVQPLGLFFWGNAWLLAAWCTTRTDYRSFRLDRCREIRMLDDRFHETPDRSLNGFLRAVRASGV >Mature_228_residues SRRADRLFQIVQVLRGRRLTTAALLAQRLGVSERTVYRDIQALSLSGVPVEGEAGIGYRLRADFDVPPLMFTALEVEALV AGLRLLKAWGGGALAAAADPALEKLMAALPPPRRLAAQQSRVFAPEYVNRAQVREAFDVVHGALGSQRLLLLDYCDAEQR ITERVVQPLGLFFWGNAWLLAAWCTTRTDYRSFRLDRCREIRMLDDRFHETPDRSLNGFLRAVRASGV
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25636; Mature: 25505
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS51000 HTH_DEOR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRADRLFQIVQVLRGRRLTTAALLAQRLGVSERTVYRDIQALSLSGVPVEGEAGIGYR CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEE LRADFDVPPLMFTALEVEALVAGLRLLKAWGGGALAAAADPALEKLMAALPPPRRLAAQQ EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHH SRVFAPEYVNRAQVREAFDVVHGALGSQRLLLLDYCDAEQRITERVVQPLGLFFWGNAWL HCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHH LAAWCTTRTDYRSFRLDRCREIRMLDDRFHETPDRSLNGFLRAVRASGV HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SRRADRLFQIVQVLRGRRLTTAALLAQRLGVSERTVYRDIQALSLSGVPVEGEAGIGYR CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEE LRADFDVPPLMFTALEVEALVAGLRLLKAWGGGALAAAADPALEKLMAALPPPRRLAAQQ EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHH SRVFAPEYVNRAQVREAFDVVHGALGSQRLLLLDYCDAEQRITERVVQPLGLFFWGNAWL HCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHH LAAWCTTRTDYRSFRLDRCREIRMLDDRFHETPDRSLNGFLRAVRASGV HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA