Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is mutL [H]
Identifier: 73542454
GI number: 73542454
Start: 3036977
End: 3038935
Strand: Direct
Name: mutL [H]
Synonym: Reut_A2769
Alternate gene names: 73542454
Gene position: 3036977-3038935 (Clockwise)
Preceding gene: 73542452
Following gene: 73542455
Centisome position: 79.78
GC content: 67.13
Gene sequence:
>1959_bases ATGCCAGCCTCCGCCTCCCGCACCGCGCAGCCGCCACGGCCGATCCGTCCCCTGCCCGACCAGCTCATCAGCCAGATTGC CGCCGGCGAAGTCGTGGAACGGCCGGCATCCGTGGTCAAGGAACTGCTCGAAAATGCACTCGACGCAGGGACAAGCCAGC TCGGCATCCGGCTCGAAGAAGGCGGCGTGAGGCGCATCGTCATCACGGACAACGGCTGCGGCATTCCGCCCGCCGAACTG CCCGTCGCGCTGATGCGCCATGCCACCAGCAAGATCGCTTCGCTCGACGAACTCGAGGCCGTACTGACCCTCGGTTTCCG CGGCGAGGCCCTTGCATCGATTGCGTCCGTCTCGCAACTCTCGCTGACCAGCCGTACCGCCAGCGACGCGCACGCCACGC AGGTCAGTGCCGATACCGGCGCAATGCAGCCGGCTTCGGGCGGCGTCGGCACCACCGTCGATGTCCAGCATCTCTACTTC AACACGCCAGCGCGCCGAAAGTTCCTCAAATCGGAACAAACAGAGCTAGGTCACTGCCTGGAAATGGTCCGCCGCGTGGC ACTGGCCCGCCCAGACGTGGCCATTTCGGTCCATCACAACGGCAAGCCGCTGGAACACTGGAACGCCGGTGACGTGGCCA CGCGCACCGCACAGGTCCTCGGCAGCGATTTCGCCCGTGCACGGCTGCCGCTCGACGAGGAAGCCGGCGACCTGCATCTG TATGGCTTTGCAGGGTTGCCCACGGCCTCGCGCGGCCGCCCGGACCAGCAGTATTTCTTCGTGAACGGCCGCTTTGTGCG CGACAAGCTGCTTAATCATGCCGTGCGCAGCGCCTACCAGGACGTACTGCATGGCGACCGCTTCCCGTCCTACGTGCTGT GCCTGGACCTGCCGCCGGAAATGGTGGACGTGAACGTCCATCCGTCCAAGATCGAGGTGCGCTTCCGCGAATCGCGCTCC GTGCATCAGTTCGTCTATCACGCCGTGCAGCGCTGTCTCGCGCGCCAGGCTGGTGAGAACGGCGACAGCCTGCACACCGG GACCGACGTCGAAGACGTGCCGGCAGCAGGCGGCGCGGGCGAACTGCGCGAGCCCCGCGCGCCATACGGTGGCACGGCGA GCAGCGGCAGCCAGTGGATCAACTATTCGGCGGCGCGCCAGACCGAACTCGGCATTGCGCAGCCACGCCAGGCTTATCTG GGCATGGTGCGCGAAGCCACCATGCCGCGGCCTTACGTGCCATCGTCCCAGCCGCCCGCGTGGCTCGCCGATGCGCAAGC CGCGCGCGCCGATGAACCGCCGAGCCTGCTCGATGGTGTGGCCCCGGCCCGCATGGCGCTGCCGATTGCGGAAGACGCTA CGGAAGGCGCTGAGGACCACCCGCTCGGCTACGCGATTGCCCAGCTCCACGGCATCTACGTGCTCGCGCAGAACGCGCGG GGCCTTGTGCTCGTCGACATGCACGCGGCGCACGAGCGCATCCTGTACGAGCAGATCAAGGACGCGCTTGATGCACGCGA TCTCGCCGTGCAGCCGCTGCTGCTGCCCGTGACGCTACCGGCAAACCCCGTGGAAATCGGCACTGCCGAAGAACATCGCG AAACGCTCGAACTGCTCGGCTTCGACATCGCTCCCGTATCGCCCACCACGCTCGCGGTGCGTGCCGTGCCGGCGCTGCTG CAGCAGGCCGACGCAGAAGCGCTGGCCCGAGACGTGCTGCGCGACCTGCACTCCTATGGCGGATCCCGAGTGCTGGCCGA GCGCCGCAACGAACTGCTGGCCACGCTGGCCTGCCACAGCGCTGTGCGCGCCAACCGCAAGCTCACGCTGGAAGAGATGA ACGCGCTGCTGCGCCAGATGGAACAGACCGAACGCGCCGACCAGTGCAATCACGGCCGCCCGACGTGGGTTCAGCTGAGC GTGTCTGAGCTCGATCGTCTTTTCCTGCGCGGCCAGTAA
Upstream 100 bases:
>100_bases CACCAAGCGCGACATCATACAAGACCCGCCCGACGCATCGGTCACCTGGCGGGGCTTGCGCGGCCATCTCGCGTGTGGCG CGCCACGTATAATCGCCCGC
Downstream 100 bases:
>100_bases CACCGCGTTTTTCACCGCGTTCGCGCACTACGCCTTGCAGAAGTCCTGATGTCCGCCCTGCCTTCGTCCGAACACCCGCC CGTCGTCTGCCTGCTGGGCC
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 652; Mature: 651
Protein sequence:
>652_residues MPASASRTAQPPRPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGTSQLGIRLEEGGVRRIVITDNGCGIPPAEL PVALMRHATSKIASLDELEAVLTLGFRGEALASIASVSQLSLTSRTASDAHATQVSADTGAMQPASGGVGTTVDVQHLYF NTPARRKFLKSEQTELGHCLEMVRRVALARPDVAISVHHNGKPLEHWNAGDVATRTAQVLGSDFARARLPLDEEAGDLHL YGFAGLPTASRGRPDQQYFFVNGRFVRDKLLNHAVRSAYQDVLHGDRFPSYVLCLDLPPEMVDVNVHPSKIEVRFRESRS VHQFVYHAVQRCLARQAGENGDSLHTGTDVEDVPAAGGAGELREPRAPYGGTASSGSQWINYSAARQTELGIAQPRQAYL GMVREATMPRPYVPSSQPPAWLADAQAARADEPPSLLDGVAPARMALPIAEDATEGAEDHPLGYAIAQLHGIYVLAQNAR GLVLVDMHAAHERILYEQIKDALDARDLAVQPLLLPVTLPANPVEIGTAEEHRETLELLGFDIAPVSPTTLAVRAVPALL QQADAEALARDVLRDLHSYGGSRVLAERRNELLATLACHSAVRANRKLTLEEMNALLRQMEQTERADQCNHGRPTWVQLS VSELDRLFLRGQ
Sequences:
>Translated_652_residues MPASASRTAQPPRPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGTSQLGIRLEEGGVRRIVITDNGCGIPPAEL PVALMRHATSKIASLDELEAVLTLGFRGEALASIASVSQLSLTSRTASDAHATQVSADTGAMQPASGGVGTTVDVQHLYF NTPARRKFLKSEQTELGHCLEMVRRVALARPDVAISVHHNGKPLEHWNAGDVATRTAQVLGSDFARARLPLDEEAGDLHL YGFAGLPTASRGRPDQQYFFVNGRFVRDKLLNHAVRSAYQDVLHGDRFPSYVLCLDLPPEMVDVNVHPSKIEVRFRESRS VHQFVYHAVQRCLARQAGENGDSLHTGTDVEDVPAAGGAGELREPRAPYGGTASSGSQWINYSAARQTELGIAQPRQAYL GMVREATMPRPYVPSSQPPAWLADAQAARADEPPSLLDGVAPARMALPIAEDATEGAEDHPLGYAIAQLHGIYVLAQNAR GLVLVDMHAAHERILYEQIKDALDARDLAVQPLLLPVTLPANPVEIGTAEEHRETLELLGFDIAPVSPTTLAVRAVPALL QQADAEALARDVLRDLHSYGGSRVLAERRNELLATLACHSAVRANRKLTLEEMNALLRQMEQTERADQCNHGRPTWVQLS VSELDRLFLRGQ >Mature_651_residues PASASRTAQPPRPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGTSQLGIRLEEGGVRRIVITDNGCGIPPAELP VALMRHATSKIASLDELEAVLTLGFRGEALASIASVSQLSLTSRTASDAHATQVSADTGAMQPASGGVGTTVDVQHLYFN TPARRKFLKSEQTELGHCLEMVRRVALARPDVAISVHHNGKPLEHWNAGDVATRTAQVLGSDFARARLPLDEEAGDLHLY GFAGLPTASRGRPDQQYFFVNGRFVRDKLLNHAVRSAYQDVLHGDRFPSYVLCLDLPPEMVDVNVHPSKIEVRFRESRSV HQFVYHAVQRCLARQAGENGDSLHTGTDVEDVPAAGGAGELREPRAPYGGTASSGSQWINYSAARQTELGIAQPRQAYLG MVREATMPRPYVPSSQPPAWLADAQAARADEPPSLLDGVAPARMALPIAEDATEGAEDHPLGYAIAQLHGIYVLAQNARG LVLVDMHAAHERILYEQIKDALDARDLAVQPLLLPVTLPANPVEIGTAEEHRETLELLGFDIAPVSPTTLAVRAVPALLQ QADAEALARDVLRDLHSYGGSRVLAERRNELLATLACHSAVRANRKLTLEEMNALLRQMEQTERADQCNHGRPTWVQLSV SELDRLFLRGQ
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=358, Percent_Identity=32.122905027933, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI4505911, Length=327, Percent_Identity=31.1926605504587, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI189458898, Length=327, Percent_Identity=31.1926605504587, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI189458896, Length=379, Percent_Identity=29.023746701847, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI4505913, Length=352, Percent_Identity=28.6931818181818, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI310128478, Length=352, Percent_Identity=28.6931818181818, Blast_Score=135, Evalue=2e-31, Organism=Homo sapiens, GI263191589, Length=265, Percent_Identity=28.3018867924528, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI310128480, Length=295, Percent_Identity=27.4576271186441, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI91992162, Length=267, Percent_Identity=25.8426966292135, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI91992160, Length=267, Percent_Identity=25.8426966292135, Blast_Score=77, Evalue=4e-14, Organism=Escherichia coli, GI1790612, Length=570, Percent_Identity=39.2982456140351, Blast_Score=342, Evalue=6e-95, Organism=Caenorhabditis elegans, GI71991825, Length=328, Percent_Identity=32.9268292682927, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17562796, Length=344, Percent_Identity=26.7441860465116, Blast_Score=133, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6323819, Length=314, Percent_Identity=35.6687898089172, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6324247, Length=342, Percent_Identity=27.7777777777778, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323063, Length=146, Percent_Identity=29.4520547945205, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI17136968, Length=338, Percent_Identity=31.6568047337278, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI17136970, Length=356, Percent_Identity=26.4044943820225, Blast_Score=104, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 70697; Mature: 70566
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASASRTAQPPRPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGTSQLGIRLEE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEC GGVRRIVITDNGCGIPPAELPVALMRHATSKIASLDELEAVLTLGFRGEALASIASVSQL CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SLTSRTASDAHATQVSADTGAMQPASGGVGTTVDVQHLYFNTPARRKFLKSEQTELGHCL HHHHCCCCCHHHHEECCCCCCCCCCCCCCCCEEEEEHEEECCHHHHHHHHHHHHHHHHHH EMVRRVALARPDVAISVHHNGKPLEHWNAGDVATRTAQVLGSDFARARLPLDEEAGDLHL HHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE YGFAGLPTASRGRPDQQYFFVNGRFVRDKLLNHAVRSAYQDVLHGDRFPSYVLCLDLPPE EEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC MVDVNVHPSKIEVRFRESRSVHQFVYHAVQRCLARQAGENGDSLHTGTDVEDVPAAGGAG CEEECCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC ELREPRAPYGGTASSGSQWINYSAARQTELGIAQPRQAYLGMVREATMPRPYVPSSQPPA CCCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC WLADAQAARADEPPSLLDGVAPARMALPIAEDATEGAEDHPLGYAIAQLHGIYVLAQNAR HHHCCHHHCCCCCHHHHHCCCCHHHCCCCHHCCCCCCCCCCHHHHHHHHCEEEEEEECCC GLVLVDMHAAHERILYEQIKDALDARDLAVQPLLLPVTLPANPVEIGTAEEHRETLELLG CEEEEECHHHHHHHHHHHHHHHHCHHHHEECCEEEEEECCCCCCCCCCHHHHHHHHHHHC FDIAPVSPTTLAVRAVPALLQQADAEALARDVLRDLHSYGGSRVLAERRNELLATLACHS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH AVRANRKLTLEEMNALLRQMEQTERADQCNHGRPTWVQLSVSELDRLFLRGQ HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCC >Mature Secondary Structure PASASRTAQPPRPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGTSQLGIRLEE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEC GGVRRIVITDNGCGIPPAELPVALMRHATSKIASLDELEAVLTLGFRGEALASIASVSQL CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SLTSRTASDAHATQVSADTGAMQPASGGVGTTVDVQHLYFNTPARRKFLKSEQTELGHCL HHHHCCCCCHHHHEECCCCCCCCCCCCCCCCEEEEEHEEECCHHHHHHHHHHHHHHHHHH EMVRRVALARPDVAISVHHNGKPLEHWNAGDVATRTAQVLGSDFARARLPLDEEAGDLHL HHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE YGFAGLPTASRGRPDQQYFFVNGRFVRDKLLNHAVRSAYQDVLHGDRFPSYVLCLDLPPE EEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC MVDVNVHPSKIEVRFRESRSVHQFVYHAVQRCLARQAGENGDSLHTGTDVEDVPAAGGAG CEEECCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC ELREPRAPYGGTASSGSQWINYSAARQTELGIAQPRQAYLGMVREATMPRPYVPSSQPPA CCCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC WLADAQAARADEPPSLLDGVAPARMALPIAEDATEGAEDHPLGYAIAQLHGIYVLAQNAR HHHCCHHHCCCCCHHHHHCCCCHHHCCCCHHCCCCCCCCCCHHHHHHHHCEEEEEEECCC GLVLVDMHAAHERILYEQIKDALDARDLAVQPLLLPVTLPANPVEIGTAEEHRETLELLG CEEEEECHHHHHHHHHHHHHHHHCHHHHEECCEEEEEECCCCCCCCCCHHHHHHHHHHHC FDIAPVSPTTLAVRAVPALLQQADAEALARDVLRDLHSYGGSRVLAERRNELLATLACHS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH AVRANRKLTLEEMNALLRQMEQTERADQCNHGRPTWVQLSVSELDRLFLRGQ HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]