Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is dut [H]
Identifier: 73542434
GI number: 73542434
Start: 3019371
End: 3019871
Strand: Direct
Name: dut [H]
Synonym: Reut_A2749
Alternate gene names: 73542434
Gene position: 3019371-3019871 (Clockwise)
Preceding gene: 73542433
Following gene: 73542439
Centisome position: 79.32
GC content: 66.67
Gene sequence:
>501_bases ATGAGCCAACAACTGAACCCGACCGTTGAAATCAAGGTCCTCGACGCCCGCCTGAACGAGTGGGGCCTGCCCGCCTACCA GAGCGACATGGCCGCCGCCATCGACCTGCACGCCTGCGTCGATGCGCCCGTGTCCATCGCCGCGGGCACCGCTGCGCAAC TGGTGCCGGCCGGCATCGCCGTGCATATGGGCAACCCGTACATGGCCGCGACCATCGTGCCGCGCTCGGGGCTGGGCCAC AAGAAGGGGCTGGTGCTCGGCAATTCGATTGGCGTGATCGATGCCGATTACCAGGGCCAGATCATGGTCAGCGTGTGGAA CCGCAACGCGCCGGGTACCGAGCCGATCGTGATTCAGCCCGGAGAGCGCATCGCGCAGATGATGTTTGTGCCCGTGCTGC GCCCGGTGTTCACGACGGTAGAAGAGTTCTCGGAGAGCAGCGAGCGCGGCGCCGGCGGTTTCGGCTCGACAGGCGTGCAC CACGCCAAGGCCAGCGCCTGA
Upstream 100 bases:
>100_bases ACGTACGAACTGCTCGCCGAAGCGTTCGAACTGAATTCCGAAAACTGATGTCCGGCCCGGGCAAGCTGCCCGGCCTGCGA CTGACTGAACCGATCCAGAA
Downstream 100 bases:
>100_bases GCGCCGGCTGGCTTCAGTGCATCAGTCCTGCTGCTCGAACAGCAGGGCCACACCTCCGGCGGCATCCGCCGGAATCAGTG TTTCATGCGGCCCCAAGTCC
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSQQLNPTVEIKVLDARLNEWGLPAYQSDMAAAIDLHACVDAPVSIAAGTAAQLVPAGIAVHMGNPYMAATIVPRSGLGH KKGLVLGNSIGVIDADYQGQIMVSVWNRNAPGTEPIVIQPGERIAQMMFVPVLRPVFTTVEEFSESSERGAGGFGSTGVH HAKASA
Sequences:
>Translated_166_residues MSQQLNPTVEIKVLDARLNEWGLPAYQSDMAAAIDLHACVDAPVSIAAGTAAQLVPAGIAVHMGNPYMAATIVPRSGLGH KKGLVLGNSIGVIDADYQGQIMVSVWNRNAPGTEPIVIQPGERIAQMMFVPVLRPVFTTVEEFSESSERGAGGFGSTGVH HAKASA >Mature_165_residues SQQLNPTVEIKVLDARLNEWGLPAYQSDMAAAIDLHACVDAPVSIAAGTAAQLVPAGIAVHMGNPYMAATIVPRSGLGHK KGLVLGNSIGVIDADYQGQIMVSVWNRNAPGTEPIVIQPGERIAQMMFVPVLRPVFTTVEEFSESSERGAGGFGSTGVHH AKASA
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Escherichia coli, GI1790071, Length=151, Percent_Identity=51.6556291390728, Blast_Score=164, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71988561, Length=167, Percent_Identity=34.7305389221557, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319729, Length=149, Percent_Identity=33.5570469798658, Blast_Score=64, Evalue=1e-11, Organism=Drosophila melanogaster, GI19921126, Length=151, Percent_Identity=34.4370860927152, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24583610, Length=151, Percent_Identity=34.4370860927152, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 17388; Mature: 17257
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQLNPTVEIKVLDARLNEWGLPAYQSDMAAAIDLHACVDAPVSIAAGTAAQLVPAGIA CCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHCCCCEE VHMGNPYMAATIVPRSGLGHKKGLVLGNSIGVIDADYQGQIMVSVWNRNAPGTEPIVIQP EECCCCEEEEEEECCCCCCCCCCEEECCCCCEEECCCCCEEEEEEECCCCCCCCCEEECC GERIAQMMFVPVLRPVFTTVEEFSESSERGAGGFGSTGVHHAKASA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQQLNPTVEIKVLDARLNEWGLPAYQSDMAAAIDLHACVDAPVSIAAGTAAQLVPAGIA CCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHCCCCEE VHMGNPYMAATIVPRSGLGHKKGLVLGNSIGVIDADYQGQIMVSVWNRNAPGTEPIVIQP EECCCCEEEEEEECCCCCCCCCCEEECCCCCEEECCCCCEEEEEEECCCCCCCCCEEECC GERIAQMMFVPVLRPVFTTVEEFSESSERGAGGFGSTGVHHAKASA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA