Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is sugE [H]
Identifier: 73542293
GI number: 73542293
Start: 2859612
End: 2859938
Strand: Direct
Name: sugE [H]
Synonym: Reut_A2608
Alternate gene names: 73542293
Gene position: 2859612-2859938 (Clockwise)
Preceding gene: 73542292
Following gene: 73542294
Centisome position: 75.12
GC content: 67.28
Gene sequence:
>327_bases ATGTCCTGGATCTTGCTGGCCTGTGCCGGCCTGCTGGAAGTTGCTTTCGCCTTTGGCATGAAGTGGTCCGCCGGCTTCAG CCGGCTGTGGCCGAGCCTCTTTGCCGCGCTCACCGGACTCAGCAGCATCGTGCTGCTGACGATGGCCCTGCGCGCCTTGC CGGTGGGCACGGCCTACGCGGTCTGGACCGGCATCGGCGCCGCCGGCACGGCGCTGCTGGGCATGGCATTGCTTGGCGAG CCGGCATCACCGGCCCGCATTGGCTGCGTGGCTCTGATCTTGTGCGGCGTGATCGGGCTGAAGCTGGTTTCAGCCGATCC GTCCTGA
Upstream 100 bases:
>100_bases CATCGCCGTCCTGTTCGTCCGCACGCTGTATCGGCTGTCCACGCACCGCCTGCTGGTCGGTTGACGGCGCCCTTCCTCTC AACGCAACGCCTTTACCACG
Downstream 100 bases:
>100_bases CACAGCGGCAAAGGCCCGCGACAACACAGAACCCATGCCACTGATCGAAACCGCTGAACGCGTACTGTTCCTGGGCCTGC TTCGCAGCCACGGGCACGTC
Product: small multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSWILLACAGLLEVAFAFGMKWSAGFSRLWPSLFAALTGLSSIVLLTMALRALPVGTAYAVWTGIGAAGTALLGMALLGE PASPARIGCVALILCGVIGLKLVSADPS
Sequences:
>Translated_108_residues MSWILLACAGLLEVAFAFGMKWSAGFSRLWPSLFAALTGLSSIVLLTMALRALPVGTAYAVWTGIGAAGTALLGMALLGE PASPARIGCVALILCGVIGLKLVSADPS >Mature_107_residues SWILLACAGLLEVAFAFGMKWSAGFSRLWPSLFAALTGLSSIVLLTMALRALPVGTAYAVWTGIGAAGTALLGMALLGEP ASPARIGCVALILCGVIGLKLVSADPS
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=102, Percent_Identity=57.843137254902, Blast_Score=113, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 10950; Mature: 10819
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWILLACAGLLEVAFAFGMKWSAGFSRLWPSLFAALTGLSSIVLLTMALRALPVGTAYA CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VWTGIGAAGTALLGMALLGEPASPARIGCVALILCGVIGLKLVSADPS HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SWILLACAGLLEVAFAFGMKWSAGFSRLWPSLFAALTGLSSIVLLTMALRALPVGTAYA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VWTGIGAAGTALLGMALLGEPASPARIGCVALILCGVIGLKLVSADPS HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]