Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is yhhW [C]
Identifier: 73542182
GI number: 73542182
Start: 2737007
End: 2737939
Strand: Direct
Name: yhhW [C]
Synonym: Reut_A2497
Alternate gene names: 73542182
Gene position: 2737007-2737939 (Clockwise)
Preceding gene: 73542176
Following gene: 73542183
Centisome position: 71.9
GC content: 67.42
Gene sequence:
>933_bases ATGATGGAAACCCGCACCGCTCTGCCCACCGTTCCGGCCACCGCGCAGGAAACCGTGCAGCGTTCGCGCACGGTGGATCG CGTCGTGCGCGGCATCGCTACCTCGGACGGCGCCGGCGTCAAGCTGACGCGCGTGCTGACCCAGAACCTGCAACGCCGGC TGGACCCGTTCCTGATGCTCGACGCCTTCGGCACCGACAGCAAGGACGACTACATCGGCGGCTTCCCCGATCACCCGCAC CGCGGCTTCGAGACCATCACCTATATGCTGGCAGGCCGCATGCGCCATCGCGACAGCGCCGGCAACGAAGGCCTGCTGCA GAACGGCGGCGCGCAGTGGATGGTGGCTGGCGCGGGCGTCGTGCACTCGGAAATGCCCGAGCAGGAAGACGGCCGCATGG AAGGCTTCCAGCTGTGGCTGAACCTGCCGGCCGCCGACAAGATGACGGCGCCGTGGTATCGCGACATGCCCGCCGATGCC ATTCCGACGGTGGCGCTGGATAACGGCGGCACGGTGCGCGTGCTGGCCGGCGCCTCGCACGGCGTGGCTGGCGCGGTCAC GCGCCCGGTGACGGAACCGATCTACCTCGACGTGCATTTGCCGGCGGGCCAGCAGTTCCGGCAGGCATTGCCGGCGGGGC ATAACGCCTTCGTCTATGTGTACCGCGGCGAGTTGTCGATCGGTGAAGGCAGCGAAAAGGCGGTGGTCGACGCACAACGC ATGGGCGTGCTCGACAACGCGGACAACGCAGACGGCGTCATCGTCAATGCCGAATCCGAGGTGCGCTTCCTGCTGATCGC CGGACAGCCGCTGGGCGAGCCGATCGCGCAGTACGGCCCGTTCGTGATGAACACGCAGGAGCAGATCTACCAGACGCTGG CGGATTTCCGCGATGGTCGGTTTGCGACGATTGCGGCGTCCACGGGAGGCTGA
Upstream 100 bases:
>100_bases CCCCACCAAACCTCTACATTGTCGGAGTACCTGAACACGACGTGGCCCCGATGACGGCAGCTCCAATGCCGCCACAACGG CCCCGCGAACCGGAGAAAGA
Downstream 100 bases:
>100_bases AGGCGAGGCTTAGCCGGGAACCCGCTGCCACACCGGACCGCCGTCCTCCGAAAGGAGGGCGGCGGTTTTTCTTTTGCCTC CCCCGGCATGCGACTTGCAA
Product: Pirin, N-terminal:Pirin, C-terminal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MMETRTALPTVPATAQETVQRSRTVDRVVRGIATSDGAGVKLTRVLTQNLQRRLDPFLMLDAFGTDSKDDYIGGFPDHPH RGFETITYMLAGRMRHRDSAGNEGLLQNGGAQWMVAGAGVVHSEMPEQEDGRMEGFQLWLNLPAADKMTAPWYRDMPADA IPTVALDNGGTVRVLAGASHGVAGAVTRPVTEPIYLDVHLPAGQQFRQALPAGHNAFVYVYRGELSIGEGSEKAVVDAQR MGVLDNADNADGVIVNAESEVRFLLIAGQPLGEPIAQYGPFVMNTQEQIYQTLADFRDGRFATIAASTGG
Sequences:
>Translated_310_residues MMETRTALPTVPATAQETVQRSRTVDRVVRGIATSDGAGVKLTRVLTQNLQRRLDPFLMLDAFGTDSKDDYIGGFPDHPH RGFETITYMLAGRMRHRDSAGNEGLLQNGGAQWMVAGAGVVHSEMPEQEDGRMEGFQLWLNLPAADKMTAPWYRDMPADA IPTVALDNGGTVRVLAGASHGVAGAVTRPVTEPIYLDVHLPAGQQFRQALPAGHNAFVYVYRGELSIGEGSEKAVVDAQR MGVLDNADNADGVIVNAESEVRFLLIAGQPLGEPIAQYGPFVMNTQEQIYQTLADFRDGRFATIAASTGG >Mature_310_residues MMETRTALPTVPATAQETVQRSRTVDRVVRGIATSDGAGVKLTRVLTQNLQRRLDPFLMLDAFGTDSKDDYIGGFPDHPH RGFETITYMLAGRMRHRDSAGNEGLLQNGGAQWMVAGAGVVHSEMPEQEDGRMEGFQLWLNLPAADKMTAPWYRDMPADA IPTVALDNGGTVRVLAGASHGVAGAVTRPVTEPIYLDVHLPAGQQFRQALPAGHNAFVYVYRGELSIGEGSEKAVVDAQR MGVLDNADNADGVIVNAESEVRFLLIAGQPLGEPIAQYGPFVMNTQEQIYQTLADFRDGRFATIAASTGG
Specific function: Unknown
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=281, Percent_Identity=39.5017793594306, Blast_Score=201, Evalue=6e-52, Organism=Homo sapiens, GI4505823, Length=281, Percent_Identity=39.5017793594306, Blast_Score=201, Evalue=6e-52, Organism=Escherichia coli, GI1789847, Length=88, Percent_Identity=37.5, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: NA
Molecular weight: Translated: 33468; Mature: 33468
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMETRTALPTVPATAQETVQRSRTVDRVVRGIATSDGAGVKLTRVLTQNLQRRLDPFLML CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCEEEE DAFGTDSKDDYIGGFPDHPHRGFETITYMLAGRMRHRDSAGNEGLLQNGGAQWMVAGAGV EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCC VHSEMPEQEDGRMEGFQLWLNLPAADKMTAPWYRDMPADAIPTVALDNGGTVRVLAGASH HHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCCCCEEEECCCCEEEEEECCCC GVAGAVTRPVTEPIYLDVHLPAGQQFRQALPAGHNAFVYVYRGELSIGEGSEKAVVDAQR CCCCHHCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEEECEEEECCCCCHHEEHHHH MGVLDNADNADGVIVNAESEVRFLLIAGQPLGEPIAQYGPFVMNTQEQIYQTLADFRDGR CCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHCCEEECCHHHHHHHHHHHCCCC FATIAASTGG EEEEEECCCC >Mature Secondary Structure MMETRTALPTVPATAQETVQRSRTVDRVVRGIATSDGAGVKLTRVLTQNLQRRLDPFLML CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCEEEE DAFGTDSKDDYIGGFPDHPHRGFETITYMLAGRMRHRDSAGNEGLLQNGGAQWMVAGAGV EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCC VHSEMPEQEDGRMEGFQLWLNLPAADKMTAPWYRDMPADAIPTVALDNGGTVRVLAGASH HHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCCCCEEEECCCCEEEEEECCCC GVAGAVTRPVTEPIYLDVHLPAGQQFRQALPAGHNAFVYVYRGELSIGEGSEKAVVDAQR CCCCHHCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEEECEEEECCCCCHHEEHHHH MGVLDNADNADGVIVNAESEVRFLLIAGQPLGEPIAQYGPFVMNTQEQIYQTLADFRDGR CCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHCCEEECCHHHHHHHHHHHCCCC FATIAASTGG EEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]