Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73542135
Identifier: 73542135
GI number: 73542135
Start: 2687076
End: 2687888
Strand: Direct
Name: 73542135
Synonym: Reut_A2449
Alternate gene names: NA
Gene position: 2687076-2687888 (Clockwise)
Preceding gene: 73542134
Following gene: 73542136
Centisome position: 70.59
GC content: 67.28
Gene sequence:
>813_bases ATGACAAACCACATGCTTGACGAGGTCCGCTCGGCCGCTGTCGCGGCGGCAAGGACCGCGCGCGAGAGTTATCGCGCCGG CAAGATCCAGCCCACGGCAGGCGTCGCGCCCGGCATGACGCAGGCCAACATGATCGCGCTGCCGCGCGACTGGGCGTGGG ACTTCCTGCTCTACGCCCAGCGCAATCCCAAGGCGTGCCCGGTGCTCGACGTGATCGAAGCCGGTGCGTATCACACCGTT CTGGCCGAAGGCGCCGACATCCGCACCGACATTCCGCTTTACCGGGTGTGGCGCAATGGCCGGCTCGTGGAAGAGGTCGC CGACGCCACGCCGCTGTGGCAGGAGCACCCCGACCTGGTCACGTTCCTGATCGGCTGCAGCTTCACCTTCGAGACACCGC TGCTGGAAGCGGGCATCGAGGTGCGCCACATCACGGACGGGTCCAACGTGCCGATGTATCGCACCAATCGCCAGTGCCGC CCCGCCGGGCGCCTGCATGGCGAGCTGGTGGTGTCCATGCGGCCCATTGCCGCCAGCCGCATCGCCGATGCCGCCATGAT TTCCGGACGCTTTCCGTCGGTGCATGGCGCACCGGTGCACGTGGGCAACCCCGAAGCGCTGGGCATCGCCGACATCCACC GCCCAGACTTTGGCGATGCGGTGCGCATCGAATCCGGCGAGATTCCTGTCTTCTGGGCCTGCGGTGTCACGCCGCAGGCC GCGGTGATGGCGTCGGGTGTTCCGTTCGCCGTGACCCATGCCCCGGGCCATATGTTCGTCACGGACGTGCCCGACAGTAC CTATCACGTCTGA
Upstream 100 bases:
>100_bases GGCACCGGCCGGCGCCACGCAAGCCGCCGAGCATTGACCCGGGACGGCACGCGATTCGGCTGACCCATGTCTGCCCGCAA CACGAAGAACGGATATCACC
Downstream 100 bases:
>100_bases TCGCTTGCGGAGTCTCAGTTGCGTTTCCTTCCTGTCTCACTGAACGCCGTGCTGGTGGAGCTGTCCGACCTGGACCAGAC GCTGGCCCTGCTGGCCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTNHMLDEVRSAAVAAARTARESYRAGKIQPTAGVAPGMTQANMIALPRDWAWDFLLYAQRNPKACPVLDVIEAGAYHTV LAEGADIRTDIPLYRVWRNGRLVEEVADATPLWQEHPDLVTFLIGCSFTFETPLLEAGIEVRHITDGSNVPMYRTNRQCR PAGRLHGELVVSMRPIAASRIADAAMISGRFPSVHGAPVHVGNPEALGIADIHRPDFGDAVRIESGEIPVFWACGVTPQA AVMASGVPFAVTHAPGHMFVTDVPDSTYHV
Sequences:
>Translated_270_residues MTNHMLDEVRSAAVAAARTARESYRAGKIQPTAGVAPGMTQANMIALPRDWAWDFLLYAQRNPKACPVLDVIEAGAYHTV LAEGADIRTDIPLYRVWRNGRLVEEVADATPLWQEHPDLVTFLIGCSFTFETPLLEAGIEVRHITDGSNVPMYRTNRQCR PAGRLHGELVVSMRPIAASRIADAAMISGRFPSVHGAPVHVGNPEALGIADIHRPDFGDAVRIESGEIPVFWACGVTPQA AVMASGVPFAVTHAPGHMFVTDVPDSTYHV >Mature_269_residues TNHMLDEVRSAAVAAARTARESYRAGKIQPTAGVAPGMTQANMIALPRDWAWDFLLYAQRNPKACPVLDVIEAGAYHTVL AEGADIRTDIPLYRVWRNGRLVEEVADATPLWQEHPDLVTFLIGCSFTFETPLLEAGIEVRHITDGSNVPMYRTNRQCRP AGRLHGELVVSMRPIAASRIADAAMISGRFPSVHGAPVHVGNPEALGIADIHRPDFGDAVRIESGEIPVFWACGVTPQAA VMASGVPFAVTHAPGHMFVTDVPDSTYHV
Specific function: Unknown
COG id: COG4336
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0317 family
Homologues:
Organism=Homo sapiens, GI156139135, Length=241, Percent_Identity=30.2904564315353, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI156139133, Length=243, Percent_Identity=30.4526748971193, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI156139131, Length=243, Percent_Identity=30.4526748971193, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI156139129, Length=243, Percent_Identity=30.4526748971193, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI156139137, Length=243, Percent_Identity=28.8065843621399, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2449_CUPPJ (Q46YH2)
Other databases:
- EMBL: CP000090 - RefSeq: YP_296655.1 - ProteinModelPortal: Q46YH2 - SMR: Q46YH2 - GeneID: 3612280 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A2449 - NMPDR: fig|264198.3.peg.3172 - HOGENOM: HBG289473 - OMA: GPMVVSM - ProtClustDB: PRK05463 - BioCyc: REUT264198:REUT_A2449-MONOMER - HAMAP: MF_01830 - InterPro: IPR009906 - InterPro: IPR016938 - PIRSF: PIRSF029755
Pfam domain/function: PF07286 DUF1445
EC number: NA
Molecular weight: Translated: 29308; Mature: 29177
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNHMLDEVRSAAVAAARTARESYRAGKIQPTAGVAPGMTQANMIALPRDWAWDFLLYAQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEC RNPKACPVLDVIEAGAYHTVLAEGADIRTDIPLYRVWRNGRLVEEVADATPLWQEHPDLV CCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCHHHHHHCCCCCHHCCCCCE TFLIGCSFTFETPLLEAGIEVRHITDGSNVPMYRTNRQCRPAGRLHGELVVSMRPIAASR EHHHHCCEEECCCHHHCCCEEEEEECCCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHH IADAAMISGRFPSVHGAPVHVGNPEALGIADIHRPDFGDAVRIESGEIPVFWACGVTPQA HHHHHHHCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCH AVMASGVPFAVTHAPGHMFVTDVPDSTYHV HHHCCCCCEEEEECCCEEEEEECCCCCCCC >Mature Secondary Structure TNHMLDEVRSAAVAAARTARESYRAGKIQPTAGVAPGMTQANMIALPRDWAWDFLLYAQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEC RNPKACPVLDVIEAGAYHTVLAEGADIRTDIPLYRVWRNGRLVEEVADATPLWQEHPDLV CCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCHHHHHHCCCCCHHCCCCCE TFLIGCSFTFETPLLEAGIEVRHITDGSNVPMYRTNRQCRPAGRLHGELVVSMRPIAASR EHHHHCCEEECCCHHHCCCEEEEEECCCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHH IADAAMISGRFPSVHGAPVHVGNPEALGIADIHRPDFGDAVRIESGEIPVFWACGVTPQA HHHHHHHCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCH AVMASGVPFAVTHAPGHMFVTDVPDSTYHV HHHCCCCCEEEEECCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA