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The map label for this gene is rraA [C]

Identifier: 73541651

GI number: 73541651

Start: 2149322

End: 2149819

Strand: Reverse

Name: rraA [C]

Synonym: Reut_A1963

Alternate gene names: 73541651

Gene position: 2149819-2149322 (Counterclockwise)

Preceding gene: 73541652

Following gene: 73541650

Centisome position: 56.48

GC content: 66.47

Gene sequence:

>498_bases
ATGAAGCATGTCACCACCGATCTTTGCGATGCCAACGAGCCGCGTCTGGCTGACGGCACGCTGCGCGTCATGGCACCGGT
GTTTCGCGCGTTCGGCAAGCAGCAGGCCTTTGCCGGCCCGGCTGCGACGCTGAAGATCTTTGAAGACAACTCGCTCGTGC
GCGAGGCGCTGGAATCGCCGGGGCAGGGCCGTGTGCTCGTAGTCGATGGCGGCGGCTCGCTGCGCTGCGCGCTGGTCGGG
GGCAACCTCGGTCTGCTGGCCGAGAAGAACGGCTGGGTCGGCATCATCGTCAATGGCTGCGTGCGCGACACGGGCGAGCT
GGATGTCTGCGACATCGGCATCCGCGCGCTCGCCGCGCATCCGCAGAAGAGCCAGAAGCGCGGTGCTGGCGAGCGCGACG
TGGCAGTGCAGATGCCCGGTGCCGTGGTACGCCCCGGCAACTGGATCTACGTGGATGCCGATGGCGTACTGGTGTCCGAA
GAAAAGCTTGGTGCCTGA

Upstream 100 bases:

>100_bases
TCGGCAACGGCAACCGTTCGCGCCGCGATGCTGGTTCGCAGGCAACGGCGGCCTAGCGCTGACCAGGCGGTACCGAAATT
CTTCCTTGCAGGAGTGTTAG

Downstream 100 bases:

>100_bases
TATGCCAAAGGTTTTTGTCTACGGCACGTTGCGCGCCGGCGAGGTCAACGATCTGAACACTGCTGCACACCGGCACGGCA
TCGCCGCGCCTACGCTGCTC

Product: ribonuclease activity regulator protein RraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKHVTTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGRVLVVDGGGSLRCALVG
GNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKSQKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSE
EKLGA

Sequences:

>Translated_165_residues
MKHVTTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGRVLVVDGGGSLRCALVG
GNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKSQKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSE
EKLGA
>Mature_165_residues
MKHVTTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGRVLVVDGGGSLRCALVG
GNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKSQKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSE
EKLGA

Specific function: Regulator Of Rnase E/Rne, Which Inhibits The Endonuclease Activity And Thereby Leads To Increase The Half-Life And Abundance Of Rnas. General Modulator Of RNA Abundance. Does Not Have Any Methyltransferase Activity. [C]

COG id: COG0684

COG function: function code H; Demethylmenaquinone methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RraA family

Homologues:

Organism=Escherichia coli, GI1790364, Length=163, Percent_Identity=42.9447852760736, Blast_Score=129, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RRAA_CUPPJ (Q46ZV6)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_296171.1
- ProteinModelPortal:   Q46ZV6
- SMR:   Q46ZV6
- GeneID:   3611140
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A1963
- NMPDR:   fig|264198.3.peg.2618
- HOGENOM:   HBG668175
- OMA:   NCALLGD
- ProtClustDB:   PRK09372
- BioCyc:   REUT264198:REUT_A1963-MONOMER
- InterPro:   IPR005493
- InterPro:   IPR010203
- Gene3D:   G3DSA:3.50.30.40
- TIGRFAMs:   TIGR01935

Pfam domain/function: PF03737 Methyltransf_6; SSF89562 RNaseE_inh/diMeMenaQ_MeTrfase

EC number: NA

Molecular weight: Translated: 17319; Mature: 17319

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHVTTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCC
GQGRVLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAH
CCCEEEEEECCCCEEEEEEECCEEEEEECCCEEEEEEECEECCCCCEEEEECCCEEEECC
PQKSQKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKLGA
CCCHHHCCCCCCCEEEECCCEEECCCCEEEEECCCEEECHHCCCC
>Mature Secondary Structure
MKHVTTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCC
GQGRVLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAH
CCCEEEEEECCCCEEEEEEECCEEEEEECCCEEEEEEECEECCCCCEEEEECCCEEEECC
PQKSQKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKLGA
CCCHHHCCCCCCCEEEECCCEEECCCCEEEEECCCEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA