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The map label for this gene is radA [H]

Identifier: 73541622

GI number: 73541622

Start: 2120752

End: 2122167

Strand: Reverse

Name: radA [H]

Synonym: Reut_A1933

Alternate gene names: 73541622

Gene position: 2122167-2120752 (Counterclockwise)

Preceding gene: 73541623

Following gene: 73541621

Centisome position: 55.75

GC content: 65.04

Gene sequence:

>1416_bases
ATGCGGTGGCCGGCCGTCGCGTTTCCGCTATCCCAATCCAAGGATCTTCCATTGGCCAAGACCAAGACCGTCTACACCTG
TACCGAATGTGGCGGCACCACGCCGCGCTGGGCCGGCCAGTGCCCGCACTGCCAGCAGTGGAACACGCTGGTCGAGACCG
TTGCGGAAGGCAGCACGGCGGGCAAGCGCTTCCAGCCGCTGGCGGCATCGGCCACGGTGCGCAAGCTTTCCGAGATCGAC
GCTGCCGATGTCCCGCGTTTTTCGAGCGGGATCGATGAATTCGACCGGGTGCTCGGCGGCGGGCTGGTTGCGGGCGGGGT
GGTGCTGATCGGTGGCGATCCGGGTATCGGCAAGTCGACGCTGCTGTTGCAGGCACTGGCCAACCTGGCCGGACAGCGGC
GCGTGCTCTATGTGAGTGGCGAAGAATCTGGCGCGCAGATCGCATTGCGCGCGCAGCGCCTCGGCGTGGAGAGCCCGACG
CTCGGACTGCTCGCCGAAATCCAGCTCGAGAAGATCCAGGCCACGCTGGAGGCGGAAAAGCCCGAGGTCGCGGTGATCGA
CTCGATCCAGACGCTGTACTCGGAGGTACTGACCTCGGCACCGGGGTCGGTCGCGCAGGTGCGTGAGTGTGCGGCGCAAC
TGACACGCATTGCCAAGAGCAGCGGTATCACCATCATCCTGGTCGGCCACGTGACCAAGGAAGGCAACCTGGCCGGTCCG
CGCGTGCTCGAGCACATCGTCGATACCGTGCTGTATTTCGAAGGCGACACCCATTCTTCGCACCGGTTGATCCGCGCGTT
CAAGAATCGTTTCGGTGCTGTAAATGAACTGGGCGTGTTTGCAATGACGGAGCGCGGCCTGCGCGGCATCAGCAATCCGT
CGGCGCTGTTCCTGTCGCAGCACGAAGAGATGGTGCCGGGGTCTTGCGTGCTGGTAACGCAAGAAGGCACACGGCCGCTG
CTGGTCGAAGTCCAGGCGTTGGTCGACACCGCCAACGTGCCGAACCCGCGACGCCTGGCCGTGGGCCTTGAACAAAACCG
GCTCGCGATGCTGCTGGCCGTGCTGCACCGGCATGCCGGTATTGCCTGCTTTGACCAGGACGTGTTCCTGAACGCTGTGG
GCGGCGTGAAGATTACCGAGCCCGCGGCCGACCTGGCCGTGCTGCTGTCGATCCACTCGTCGATGCGCAACAAGCCGTTG
CCGCGCGGGCTGGTGGTGTTCGGCGAAGTCGGGCTGGCCGGCGAAATTCGCCCGAGTCCGCGCGGGCAGGAGCGCCTGAA
GGAAGCCGCGAAGCTGGGCTTCACGCAGGCTGTGATCCCCAAGGCCAATGCGCCCAAGCAGAAGATCGACGGACTCGAGG
TGATCGCAGTCGAGCGCATCGAACAGGCGATCGATCGCGTGCGCCATCTCGACTGA

Upstream 100 bases:

>100_bases
CGTGCCGACCACGGTGGCAACCATTACGGCGCCGGACAGCGCCTCGCCGCTGCTGGCCTGAGTGCTACCCTGACCGGATC
TGTCCTGACGGCCGGCTGCC

Downstream 100 bases:

>100_bases
GCGATGGCCAAGCTCATCGAAATCGACACGCCGCGCCTGCGCCTGCGCCAGTGGCGCAATGCCGACGACGCGCCGTTTGC
GGCACTGAACGCCGACGCCG

Product: DNA repair protein RadA

Products: NA

Alternate protein names: DNA repair protein sms homolog [H]

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MRWPAVAFPLSQSKDLPLAKTKTVYTCTECGGTTPRWAGQCPHCQQWNTLVETVAEGSTAGKRFQPLAASATVRKLSEID
AADVPRFSSGIDEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQALANLAGQRRVLYVSGEESGAQIALRAQRLGVESPT
LGLLAEIQLEKIQATLEAEKPEVAVIDSIQTLYSEVLTSAPGSVAQVRECAAQLTRIAKSSGITIILVGHVTKEGNLAGP
RVLEHIVDTVLYFEGDTHSSHRLIRAFKNRFGAVNELGVFAMTERGLRGISNPSALFLSQHEEMVPGSCVLVTQEGTRPL
LVEVQALVDTANVPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLNAVGGVKITEPAADLAVLLSIHSSMRNKPL
PRGLVVFGEVGLAGEIRPSPRGQERLKEAAKLGFTQAVIPKANAPKQKIDGLEVIAVERIEQAIDRVRHLD

Sequences:

>Translated_471_residues
MRWPAVAFPLSQSKDLPLAKTKTVYTCTECGGTTPRWAGQCPHCQQWNTLVETVAEGSTAGKRFQPLAASATVRKLSEID
AADVPRFSSGIDEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQALANLAGQRRVLYVSGEESGAQIALRAQRLGVESPT
LGLLAEIQLEKIQATLEAEKPEVAVIDSIQTLYSEVLTSAPGSVAQVRECAAQLTRIAKSSGITIILVGHVTKEGNLAGP
RVLEHIVDTVLYFEGDTHSSHRLIRAFKNRFGAVNELGVFAMTERGLRGISNPSALFLSQHEEMVPGSCVLVTQEGTRPL
LVEVQALVDTANVPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLNAVGGVKITEPAADLAVLLSIHSSMRNKPL
PRGLVVFGEVGLAGEIRPSPRGQERLKEAAKLGFTQAVIPKANAPKQKIDGLEVIAVERIEQAIDRVRHLD
>Mature_471_residues
MRWPAVAFPLSQSKDLPLAKTKTVYTCTECGGTTPRWAGQCPHCQQWNTLVETVAEGSTAGKRFQPLAASATVRKLSEID
AADVPRFSSGIDEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQALANLAGQRRVLYVSGEESGAQIALRAQRLGVESPT
LGLLAEIQLEKIQATLEAEKPEVAVIDSIQTLYSEVLTSAPGSVAQVRECAAQLTRIAKSSGITIILVGHVTKEGNLAGP
RVLEHIVDTVLYFEGDTHSSHRLIRAFKNRFGAVNELGVFAMTERGLRGISNPSALFLSQHEEMVPGSCVLVTQEGTRPL
LVEVQALVDTANVPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLNAVGGVKITEPAADLAVLLSIHSSMRNKPL
PRGLVVFGEVGLAGEIRPSPRGQERLKEAAKLGFTQAVIPKANAPKQKIDGLEVIAVERIEQAIDRVRHLD

Specific function: May play a role in the repair of endogenous alkylation damage [H]

COG id: COG1066

COG function: function code O; Predicted ATP-dependent serine protease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family. RadA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790850, Length=449, Percent_Identity=57.4610244988864, Blast_Score=529, Evalue=1e-151,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR004504
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF06745 KaiC; PF05362 Lon_C [H]

EC number: NA

Molecular weight: Translated: 50363; Mature: 50363

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWPAVAFPLSQSKDLPLAKTKTVYTCTECGGTTPRWAGQCPHCQQWNTLVETVAEGSTA
CCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
GKRFQPLAASATVRKLSEIDAADVPRFSSGIDEFDRVLGGGLVAGGVVLIGGDPGIGKST
CCCCCCHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHCCCEEECCEEEECCCCCCCHHH
LLLQALANLAGQRRVLYVSGEESGAQIALRAQRLGVESPTLGLLAEIQLEKIQATLEAEK
HHHHHHHHHCCCCEEEEEECCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PEVAVIDSIQTLYSEVLTSAPGSVAQVRECAAQLTRIAKSSGITIILVGHVTKEGNLAGP
CCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHH
RVLEHIVDTVLYFEGDTHSSHRLIRAFKNRFGAVNELGVFAMTERGLRGISNPSALFLSQ
HHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHEEECC
HEEMVPGSCVLVTQEGTRPLLVEVQALVDTANVPNPRRLAVGLEQNRLAMLLAVLHRHAG
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCC
IACFDQDVFLNAVGGVKITEPAADLAVLLSIHSSMRNKPLPRGLVVFGEVGLAGEIRPSP
CEEECCCHHEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC
RGQERLKEAAKLGFTQAVIPKANAPKQKIDGLEVIAVERIEQAIDRVRHLD
CHHHHHHHHHHCCCHHEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRWPAVAFPLSQSKDLPLAKTKTVYTCTECGGTTPRWAGQCPHCQQWNTLVETVAEGSTA
CCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
GKRFQPLAASATVRKLSEIDAADVPRFSSGIDEFDRVLGGGLVAGGVVLIGGDPGIGKST
CCCCCCHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHCCCEEECCEEEECCCCCCCHHH
LLLQALANLAGQRRVLYVSGEESGAQIALRAQRLGVESPTLGLLAEIQLEKIQATLEAEK
HHHHHHHHHCCCCEEEEEECCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PEVAVIDSIQTLYSEVLTSAPGSVAQVRECAAQLTRIAKSSGITIILVGHVTKEGNLAGP
CCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHH
RVLEHIVDTVLYFEGDTHSSHRLIRAFKNRFGAVNELGVFAMTERGLRGISNPSALFLSQ
HHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHEEECC
HEEMVPGSCVLVTQEGTRPLLVEVQALVDTANVPNPRRLAVGLEQNRLAMLLAVLHRHAG
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCC
IACFDQDVFLNAVGGVKITEPAADLAVLLSIHSSMRNKPLPRGLVVFGEVGLAGEIRPSP
CEEECCCHHEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC
RGQERLKEAAKLGFTQAVIPKANAPKQKIDGLEVIAVERIEQAIDRVRHLD
CHHHHHHHHHHCCCHHEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]