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The map label for this gene is lhr [C]

Identifier: 73541542

GI number: 73541542

Start: 2027408

End: 2030104

Strand: Reverse

Name: lhr [C]

Synonym: Reut_A1853

Alternate gene names: 73541542

Gene position: 2030104-2027408 (Counterclockwise)

Preceding gene: 73541543

Following gene: 73541541

Centisome position: 53.33

GC content: 67.26

Gene sequence:

>2697_bases
ATGAGCGCACGTCGCTCCACTAAAGCCACGGCGGGTGCTCCCCTCACATCCGCTCCGCCGGTGGCGCGCAAACTGCCCGA
TCTGTTTGCAGCCCGTCACTGGCAGCCGTTCGACTTCCAGCGCGCGGTATGGGAGGCCATTGGCCAAGGCCAAAGCGGCC
TGTTGCACGCTACCACCGGCACGGGCAAGACTTATGCCGCATGGCTGGGTGCGTTGCTGGCATTTGCCAGCCCGCCATCC
CGCCCCGGCGCGCCGCCGCCTCCGCTGACCGTGCTCTGGCTGACGCCGATGCGCGCGCTCGCCGCGGATACCACGCGTGC
GCTGATTGCACCGCTTGGCGAACTCGGCCTCGACTGGGCCGTCGGGCTTCGCACCGGCGATACCAGCAGCAGCGAGCGTG
CAGCGCAGGCACGCCAGTTGCCGACCGCACTAGTGACTACCCCGGAAAGCCTGTCGCTGCTCCTGACGCGTGCCGATGCG
CGTGAGACGCTCAGAAGCGTGCGGCTGGTCGTGGTCGACGAATGGCACGAACTGATTGGCAGCAAGCGCGGGGTGCAGGT
GCAGCTGGCATTGGCACGACTGCACCGATGGCAGCCAGATCTGTGTGTGTGGGGCTTGTCCGCGACGCTTGGCAACCTGG
ACCATGCGCGTGATGTGCTGCTGGCCGGTGTCTCGCCGGAACGGCGGGTACTGGTGCATGGCCATACGCCAAAGACACTG
ATCATCGACACGCTGCTGCCGGACGCCGCCAGCCGTTTTCCATGGGCGGGGCACCTTGGTCTGTCGATGCTGCCTCACGT
GGTGCGGGAACTGGAAGCCAGCGGCACGACGCTCGTCTTTCTCAATACGCGATCGCAGGCGGAGTTGTGGTACCAGGCAC
TGCTCGATGCGAAGCCCGAGTGGGCGGGACTGATCGCGTTGCATCATGGGTCGCTGGACCGAGCTGTACGCGAATGGGTC
GAACAGAACCTCAAGAACGGCGCGCTGCGGGCCGTGGTGTGTACTTCGAGCCTGGATCTCGGTGTGGACTTCCTGCCCGT
GGAGCGCGTGCTGCAGATCGGATCGCCCAAGGGCGTAGCCCGGCTGCTGCAGCGCGCAGGGCGATCGGGACACGCTCCCG
GCCGGGCCTCGCGCGTGACCGTGGTGCCCACGCACAGCCTGGAACTCGTGGAGGCGGTTGCCGCGCGCCAAGCCGCGCTG
GCTGGGCGGATCGAGGCGCGCGATTCGCCGGATAAGCCGCTCGACGTGCTCGTCCAGCACTTGGTCACGGTGGCACTCGG
CGGAGGCTTCCGTGCAAGCGAGCTGCTGGCGGAAGTGCGCACCACATGGGCCTACCGCGCGCTGACCGACGAGGAATGGC
AGTGGTGCCTGGCTTTTGTGCGCGATGGCGGCGGAACGTTGTCGGCGTATCCCGACTATCGTCGCGCGATGCCTGACGAT
GACGGCGTCTGGCGGGTTCCCGACGCCCGGCTTGCGCGCAGGCACCGGATGAGCGTGGGCACGATTGTCAGTGAGACGAC
GATGCAGGTGCGCTATTGGACCCGGGCGGGCAGCGGCGGGGCGTCGCTGGGCACAGTCGAGGAAGGCTTTATTGCGCGAC
TTGCGCCGGGCGACTGCTTCCTGTTCGGCGGCCGCCTGCTGGAACTGGTGCGCACACAGGAGATGACCGCCTACGTACGC
CGTGCCACGGGCAAGCGGCCAGCGGTACCTCGGTGGAACGGCGGCAAGATGCCCCTTTCCACCGAACTCGCCGACGCCGT
TGTCACGACGCTTGACGCGGTGCAGGCGGGCCGGCTGGATCCGTCCGCCACGCCCGAGTTGCCGCTGATCCAGCCGCTGG
TGGAGCTTCAGATGCGCTGGTCTGCGCTGCCCACTCCCGAAACGCTGCTCGCGGAAACGCTGCATTCGCGCGAAGGGTGG
CATCTTTTTCTCTATCCATTTGCGGGACGGTCCGTGCATCTCGGACTGGGCAGCCTTCTGGCGTGGCGGCTGGGGCAGAA
GGTGCCGGCCACGTTCTCGGTCGCCGTCAACGACTACGGTCTGGAATTGCTGGCGTCCGCACCCCTCGACTGGAGTCAGT
GGTTGCCGCGGGTGCTGGCGGAAGAACGCCATCGCGATCTGGCTGCCGACGTGTTGGGCAGCCTGAACGCAGGCGAACTG
TCGTTGCGCCGCTTCCGCGAGATCGCGCGCGTTGCGGGGCTGGTGTTCCAGGGCTATCCCGGCGCGGCAAAGAGTGCGCG
GCAATTGCAGGCCTCGTCGAGCCTGTTCTATGAAGTCTTTCGCAAGTACGACCCCGGCAATCTTCTGCTCGGTCAGGCTG
AACGCGAGGTGCTGATGCAGGAACTGGATGCGCACCGGCTGGCCACCACGCTGGCGCGGCTGGCGTCAATGCGGCTGGAC
TTGCACGTGCTGGAGCGGCCATCGCCGCTGGCATTCCCTCTGATCGTAGAGTTCCTGCGCGAAAAGCTCAGTACCGAAAA
GCTCGCCGACCGCATCGCCCGGATGCTCGCCGACCTGGAGCGGGCGGCGGGGCCCGCACCTGACTACACGGGGCCCATGC
ATGACATGCAATCAGGGGCCGACGCGGCTTGGGTCGCGGCGCAAGCGCGCTTTGGCATGGCGGATCACGCCGGACCGGCA
GGCCCGCGCAAGCCCCGACGGGCGCGCAAGCCATCGCGGCCGTTACCGCTGCTATGA

Upstream 100 bases:

>100_bases
CGAACGGGACGTCTCCGACTGACGGAGGCGAAGGAGCCGACTACGCTCCACAATACCGGGTGGCCGGCAAGCTTCCCATC
ACGTCGCGCGAGGTTGCTCC

Downstream 100 bases:

>100_bases
CTCGGATCCGAGACATCAACCCGGTGGCGATGGGAGCCCACGTCGTGCACGTGGCCGGCGAAACGCTGTGGTTGCTGCCC
GAGCATGCGGTGTGGTGGCC

Product: helicase, C-terminal:DEAD/DEAH box helicase, N-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 898; Mature: 897

Protein sequence:

>898_residues
MSARRSTKATAGAPLTSAPPVARKLPDLFAARHWQPFDFQRAVWEAIGQGQSGLLHATTGTGKTYAAWLGALLAFASPPS
RPGAPPPPLTVLWLTPMRALAADTTRALIAPLGELGLDWAVGLRTGDTSSSERAAQARQLPTALVTTPESLSLLLTRADA
RETLRSVRLVVVDEWHELIGSKRGVQVQLALARLHRWQPDLCVWGLSATLGNLDHARDVLLAGVSPERRVLVHGHTPKTL
IIDTLLPDAASRFPWAGHLGLSMLPHVVRELEASGTTLVFLNTRSQAELWYQALLDAKPEWAGLIALHHGSLDRAVREWV
EQNLKNGALRAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRASRVTVVPTHSLELVEAVAARQAAL
AGRIEARDSPDKPLDVLVQHLVTVALGGGFRASELLAEVRTTWAYRALTDEEWQWCLAFVRDGGGTLSAYPDYRRAMPDD
DGVWRVPDARLARRHRMSVGTIVSETTMQVRYWTRAGSGGASLGTVEEGFIARLAPGDCFLFGGRLLELVRTQEMTAYVR
RATGKRPAVPRWNGGKMPLSTELADAVVTTLDAVQAGRLDPSATPELPLIQPLVELQMRWSALPTPETLLAETLHSREGW
HLFLYPFAGRSVHLGLGSLLAWRLGQKVPATFSVAVNDYGLELLASAPLDWSQWLPRVLAEERHRDLAADVLGSLNAGEL
SLRRFREIARVAGLVFQGYPGAAKSARQLQASSSLFYEVFRKYDPGNLLLGQAEREVLMQELDAHRLATTLARLASMRLD
LHVLERPSPLAFPLIVEFLREKLSTEKLADRIARMLADLERAAGPAPDYTGPMHDMQSGADAAWVAAQARFGMADHAGPA
GPRKPRRARKPSRPLPLL

Sequences:

>Translated_898_residues
MSARRSTKATAGAPLTSAPPVARKLPDLFAARHWQPFDFQRAVWEAIGQGQSGLLHATTGTGKTYAAWLGALLAFASPPS
RPGAPPPPLTVLWLTPMRALAADTTRALIAPLGELGLDWAVGLRTGDTSSSERAAQARQLPTALVTTPESLSLLLTRADA
RETLRSVRLVVVDEWHELIGSKRGVQVQLALARLHRWQPDLCVWGLSATLGNLDHARDVLLAGVSPERRVLVHGHTPKTL
IIDTLLPDAASRFPWAGHLGLSMLPHVVRELEASGTTLVFLNTRSQAELWYQALLDAKPEWAGLIALHHGSLDRAVREWV
EQNLKNGALRAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRASRVTVVPTHSLELVEAVAARQAAL
AGRIEARDSPDKPLDVLVQHLVTVALGGGFRASELLAEVRTTWAYRALTDEEWQWCLAFVRDGGGTLSAYPDYRRAMPDD
DGVWRVPDARLARRHRMSVGTIVSETTMQVRYWTRAGSGGASLGTVEEGFIARLAPGDCFLFGGRLLELVRTQEMTAYVR
RATGKRPAVPRWNGGKMPLSTELADAVVTTLDAVQAGRLDPSATPELPLIQPLVELQMRWSALPTPETLLAETLHSREGW
HLFLYPFAGRSVHLGLGSLLAWRLGQKVPATFSVAVNDYGLELLASAPLDWSQWLPRVLAEERHRDLAADVLGSLNAGEL
SLRRFREIARVAGLVFQGYPGAAKSARQLQASSSLFYEVFRKYDPGNLLLGQAEREVLMQELDAHRLATTLARLASMRLD
LHVLERPSPLAFPLIVEFLREKLSTEKLADRIARMLADLERAAGPAPDYTGPMHDMQSGADAAWVAAQARFGMADHAGPA
GPRKPRRARKPSRPLPLL
>Mature_897_residues
SARRSTKATAGAPLTSAPPVARKLPDLFAARHWQPFDFQRAVWEAIGQGQSGLLHATTGTGKTYAAWLGALLAFASPPSR
PGAPPPPLTVLWLTPMRALAADTTRALIAPLGELGLDWAVGLRTGDTSSSERAAQARQLPTALVTTPESLSLLLTRADAR
ETLRSVRLVVVDEWHELIGSKRGVQVQLALARLHRWQPDLCVWGLSATLGNLDHARDVLLAGVSPERRVLVHGHTPKTLI
IDTLLPDAASRFPWAGHLGLSMLPHVVRELEASGTTLVFLNTRSQAELWYQALLDAKPEWAGLIALHHGSLDRAVREWVE
QNLKNGALRAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRASRVTVVPTHSLELVEAVAARQAALA
GRIEARDSPDKPLDVLVQHLVTVALGGGFRASELLAEVRTTWAYRALTDEEWQWCLAFVRDGGGTLSAYPDYRRAMPDDD
GVWRVPDARLARRHRMSVGTIVSETTMQVRYWTRAGSGGASLGTVEEGFIARLAPGDCFLFGGRLLELVRTQEMTAYVRR
ATGKRPAVPRWNGGKMPLSTELADAVVTTLDAVQAGRLDPSATPELPLIQPLVELQMRWSALPTPETLLAETLHSREGWH
LFLYPFAGRSVHLGLGSLLAWRLGQKVPATFSVAVNDYGLELLASAPLDWSQWLPRVLAEERHRDLAADVLGSLNAGELS
LRRFREIARVAGLVFQGYPGAAKSARQLQASSSLFYEVFRKYDPGNLLLGQAEREVLMQELDAHRLATTLARLASMRLDL
HVLERPSPLAFPLIVEFLREKLSTEKLADRIARMLADLERAAGPAPDYTGPMHDMQSGADAAWVAAQARFGMADHAGPAG
PRKPRRARKPSRPLPLL

Specific function: Unknown

COG id: COG1201

COG function: function code R; Lhr-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787942, Length=921, Percent_Identity=28.6644951140065, Blast_Score=206, Evalue=5e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR013701
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR017170 [H]

Pfam domain/function: PF00270 DEAD; PF08494 DEAD_assoc; PF00271 Helicase_C [H]

EC number: 3.6.1.-

Molecular weight: Translated: 97986; Mature: 97855

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARRSTKATAGAPLTSAPPVARKLPDLFAARHWQPFDFQRAVWEAIGQGQSGLLHATTG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECC
TGKTYAAWLGALLAFASPPSRPGAPPPPLTVLWLTPMRALAADTTRALIAPLGELGLDWA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEE
VGLRTGDTSSSERAAQARQLPTALVTTPESLSLLLTRADARETLRSVRLVVVDEWHELIG
EEEECCCCCCHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHC
SKRGVQVQLALARLHRWQPDLCVWGLSATLGNLDHARDVLLAGVSPERRVLVHGHTPKTL
CCCCCEEHHHHHHHHCCCCCCEEEEHHHHHCCHHHHHHHHEECCCCCCEEEEECCCCCEE
IIDTLLPDAASRFPWAGHLGLSMLPHVVRELEASGTTLVFLNTRSQAELWYQALLDAKPE
EEEHHCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCC
WAGLIALHHGSLDRAVREWVEQNLKNGALRAVVCTSSLDLGVDFLPVERVLQIGSPKGVA
CEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHH
RLLQRAGRSGHAPGRASRVTVVPTHSLELVEAVAARQAALAGRIEARDSPDKPLDVLVQH
HHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LVTVALGGGFRASELLAEVRTTWAYRALTDEEWQWCLAFVRDGGGTLSAYPDYRRAMPDD
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
DGVWRVPDARLARRHRMSVGTIVSETTMQVRYWTRAGSGGASLGTVEEGFIARLAPGDCF
CCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCEE
LFGGRLLELVRTQEMTAYVRRATGKRPAVPRWNGGKMPLSTELADAVVTTLDAVQAGRLD
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PSATPELPLIQPLVELQMRWSALPTPETLLAETLHSREGWHLFLYPFAGRSVHLGLGSLL
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEECCHHHHH
AWRLGQKVPATFSVAVNDYGLELLASAPLDWSQWLPRVLAEERHRDLAADVLGSLNAGEL
HHHHCCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
SLRRFREIARVAGLVFQGYPGAAKSARQLQASSSLFYEVFRKYDPGNLLLGQAEREVLMQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH
ELDAHRLATTLARLASMRLDLHVLERPSPLAFPLIVEFLREKLSTEKLADRIARMLADLE
HHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAGPAPDYTGPMHDMQSGADAAWVAAQARFGMADHAGPAGPRKPRRARKPSRPLPLL
HHCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure 
SARRSTKATAGAPLTSAPPVARKLPDLFAARHWQPFDFQRAVWEAIGQGQSGLLHATTG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECC
TGKTYAAWLGALLAFASPPSRPGAPPPPLTVLWLTPMRALAADTTRALIAPLGELGLDWA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEE
VGLRTGDTSSSERAAQARQLPTALVTTPESLSLLLTRADARETLRSVRLVVVDEWHELIG
EEEECCCCCCHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHC
SKRGVQVQLALARLHRWQPDLCVWGLSATLGNLDHARDVLLAGVSPERRVLVHGHTPKTL
CCCCCEEHHHHHHHHCCCCCCEEEEHHHHHCCHHHHHHHHEECCCCCCEEEEECCCCCEE
IIDTLLPDAASRFPWAGHLGLSMLPHVVRELEASGTTLVFLNTRSQAELWYQALLDAKPE
EEEHHCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCC
WAGLIALHHGSLDRAVREWVEQNLKNGALRAVVCTSSLDLGVDFLPVERVLQIGSPKGVA
CEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHH
RLLQRAGRSGHAPGRASRVTVVPTHSLELVEAVAARQAALAGRIEARDSPDKPLDVLVQH
HHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LVTVALGGGFRASELLAEVRTTWAYRALTDEEWQWCLAFVRDGGGTLSAYPDYRRAMPDD
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
DGVWRVPDARLARRHRMSVGTIVSETTMQVRYWTRAGSGGASLGTVEEGFIARLAPGDCF
CCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCEE
LFGGRLLELVRTQEMTAYVRRATGKRPAVPRWNGGKMPLSTELADAVVTTLDAVQAGRLD
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PSATPELPLIQPLVELQMRWSALPTPETLLAETLHSREGWHLFLYPFAGRSVHLGLGSLL
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEECCHHHHH
AWRLGQKVPATFSVAVNDYGLELLASAPLDWSQWLPRVLAEERHRDLAADVLGSLNAGEL
HHHHCCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
SLRRFREIARVAGLVFQGYPGAAKSARQLQASSSLFYEVFRKYDPGNLLLGQAEREVLMQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH
ELDAHRLATTLARLASMRLDLHVLERPSPLAFPLIVEFLREKLSTEKLADRIARMLADLE
HHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAGPAPDYTGPMHDMQSGADAAWVAAQARFGMADHAGPAGPRKPRRARKPSRPLPLL
HHCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]