Click here to switch to the map view.

The map label for this gene is frc [C]

Identifier: 73541518

GI number: 73541518

Start: 2004387

End: 2005049

Strand: Reverse

Name: frc [C]

Synonym: Reut_A1829

Alternate gene names: 73541518

Gene position: 2005049-2004387 (Counterclockwise)

Preceding gene: 73541519

Following gene: 73541511

Centisome position: 52.67

GC content: 70.89

Gene sequence:

>663_bases
ATGCGCAAGACCCAGGGCCCGCTCGCGGGCGTCAGGATTGTGGAACTGGGCGGCACAGGGCCTGTGCCGTTCTGCTGCAT
GCTGCTCGCGGACCTTGGGGCGGACATCATCCGCATCGACCGTCCACCGGGCCACGATGGCGGGCAGCCCGGCGATCCGC
GCTTCAACCTGCTCAACCGCGGCCGGCGCAGCGCCGCACTCGACCACGTCTACGAGACGCAGGACGGCCGCTGGATCAGC
GTGGGGTCCAACGAGGCGCGCTTCTGGCGCCAGACGCTGGAAGTGCTCGGGCTGGACGAGGCGGAGATGCCGGACCAGCA
CGACCGTTCGCGCTGGCCGGAGGTGCAGGCGAGATTCGCGGAAATCTTCCGCACGCGTACGCGCGACGAATGGTGTGCGC
TGGCCGAAGGACGGGAGGTCTGCTTCGCGCCGGTCATGTCGCTGGCGGAGGCGCCCGGCCATCCGCATCTGCGGGCGCGC
GGGACGTTCGTCGAGCGGGACGGTGTCGTGCAGCCTGCGCCCGCCCCGCGCTTCAGCCGCACGCCCGGCGCGATCCAGAA
TTCGCCAGCCCGCCCCGGCGAGCATACCGACGTGGTGCTAGGCGACTGGGGCTTCAGCGCACCTGACATTGCGGCATTGC
GCGCGGCCGGCGCCATTGTGTGA

Upstream 100 bases:

>100_bases
AGTGCTTGACCCGGAGATCGCGAAGTAGAACACGCCAGCATCACCACCGGAACCCCGCTCCTTGACGAGCCGGGTTTCAA
CGTTTGGGGAGACCAATACG

Downstream 100 bases:

>100_bases
GGCGGCGGGCCGCGCAGCCGGTCTTCAGCAGATCGTCAGTGAATCGTCAGCCCGCCGGTCGGGCTGATGGTCGCCCCAGT
CAGGTAGCGCGACTCGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha-Methylacyl-CoA Racemase; Fatty Acid-CoA Racemase; Racemase; CoA-Transferase Family III Family Protein; Acyl-CoA Transferase/Carnitine Dehydratase; CAIB/BAIF Family Protein; Acyl-CoA Transferase; Fatty-Acid-CoA Racemase Far; CAIB/BAIF Family; Acyl-CoA Transferases/Carnitine Dehydratase; L-Carnitine Dehydratase; Fatty Acid Co-A Racemase; CoA-Transferase Family III Protein; Fatty-Acyl-CoA Racemase; Alpha-Methylacyl-CoA Racemase Mcr; Formyl-CoA Transferase; L-Carnitine Dehydrogenase; Mcr Protein; L-Carnitine Dehydratase/Bile Acid-Inducible; Isomerase; Caib/Baif Family Protein; CaiB/BaiF Family Protein

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRKTQGPLAGVRIVELGGTGPVPFCCMLLADLGADIIRIDRPPGHDGGQPGDPRFNLLNRGRRSAALDHVYETQDGRWIS
VGSNEARFWRQTLEVLGLDEAEMPDQHDRSRWPEVQARFAEIFRTRTRDEWCALAEGREVCFAPVMSLAEAPGHPHLRAR
GTFVERDGVVQPAPAPRFSRTPGAIQNSPARPGEHTDVVLGDWGFSAPDIAALRAAGAIV

Sequences:

>Translated_220_residues
MRKTQGPLAGVRIVELGGTGPVPFCCMLLADLGADIIRIDRPPGHDGGQPGDPRFNLLNRGRRSAALDHVYETQDGRWIS
VGSNEARFWRQTLEVLGLDEAEMPDQHDRSRWPEVQARFAEIFRTRTRDEWCALAEGREVCFAPVMSLAEAPGHPHLRAR
GTFVERDGVVQPAPAPRFSRTPGAIQNSPARPGEHTDVVLGDWGFSAPDIAALRAAGAIV
>Mature_220_residues
MRKTQGPLAGVRIVELGGTGPVPFCCMLLADLGADIIRIDRPPGHDGGQPGDPRFNLLNRGRRSAALDHVYETQDGRWIS
VGSNEARFWRQTLEVLGLDEAEMPDQHDRSRWPEVQARFAEIFRTRTRDEWCALAEGREVCFAPVMSLAEAPGHPHLRAR
GTFVERDGVVQPAPAPRFSRTPGAIQNSPARPGEHTDVVLGDWGFSAPDIAALRAAGAIV

Specific function: Catalyzes The Transfer Of The CoA Moiety From Formyl-CoA To Oxalate. [C]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42794625, Length=169, Percent_Identity=36.094674556213, Blast_Score=111, Evalue=6e-25,
Organism=Homo sapiens, GI266456254, Length=169, Percent_Identity=36.094674556213, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24585488, Length=120, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.8.3.16 [C]

Molecular weight: Translated: 24102; Mature: 24102

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTQGPLAGVRIVELGGTGPVPFCCMLLADLGADIIRIDRPPGHDGGQPGDPRFNLLNR
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHC
GRRSAALDHVYETQDGRWISVGSNEARFWRQTLEVLGLDEAEMPDQHDRSRWPEVQARFA
CHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHH
EIFRTRTRDEWCALAEGREVCFAPVMSLAEAPGHPHLRARGTFVERDGVVQPAPAPRFSR
HHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCEECCCCCCCCCCCCCCCC
TPGAIQNSPARPGEHTDVVLGDWGFSAPDIAALRAAGAIV
CCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRKTQGPLAGVRIVELGGTGPVPFCCMLLADLGADIIRIDRPPGHDGGQPGDPRFNLLNR
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHC
GRRSAALDHVYETQDGRWISVGSNEARFWRQTLEVLGLDEAEMPDQHDRSRWPEVQARFA
CHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHH
EIFRTRTRDEWCALAEGREVCFAPVMSLAEAPGHPHLRARGTFVERDGVVQPAPAPRFSR
HHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCEECCCCCCCCCCCCCCCC
TPGAIQNSPARPGEHTDVVLGDWGFSAPDIAALRAAGAIV
CCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA