| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is acsA [H]
Identifier: 73541510
GI number: 73541510
Start: 1993992
End: 1995950
Strand: Reverse
Name: acsA [H]
Synonym: Reut_A1821
Alternate gene names: 73541510
Gene position: 1995950-1993992 (Counterclockwise)
Preceding gene: 73541511
Following gene: 73541509
Centisome position: 52.43
GC content: 67.18
Gene sequence:
>1959_bases ATGATGGATACCGAAGCCAACACCTGGAAGCCGGGCCCGCGCGAGTTGCAGGCCTCCGGCATTGCGCAACTGATGCGCGC GTTCGACTTGACGCGATATGACGACCTGCTCGAACTCTCGCGCAATCATCCCGACCGCTACTGGCAGGTGGCCATGCAGC ACTGCGGGATCGTGTGGGACACGCCGCCGACGAGCTACCTCGATCCGGCATCGCCGCGCGAATTCCCCCAGTGGTTCCCG GGCGGGCGACTGAACTGGGTCAATACCGTGCTGGCGTGGACGGACGATCCCCGTACGCGTGATCAGGCCGCAGTTGTCGC GGAACGGGAGGGCGGCGAGGTCCAGTCCATCAGTTATGCGGAACTCGGCACGCGCGTGCGTCAGTTCGCGAGCGGCCTGC AGGCGCTCGGCATCGGCCGCGGCGAGCGCGTGGGCCTGCTGATGGAGAACGGTATCGAGGCGACGGTATCGCTGCTGGCG CTCGCGTCGATCGGGGCGATCGTCGTGCCTTTGTTCAGCGGCTTCGGCGTGGACGCCATCGTCGCGCGGCTGTCGGCGGC CGAGGCCACTTCGGTGATTGCCTCCACGGGCTTCAGCCGACGCAGCAAGCGCATCGACGTGGAAGGGACGCTGCGCGAAG CGTGGGCACGGCTGCCCGCGCTCAAGCGCGTGGTCTGGAAGCAGGCTGGCGCGGCGCAGGCGGCCGGACCGCAGGATCTC GACTGGCAGGCAGTGATGGCGTCGGGCGCCGGAAGACTGGCCGACCCTGTCACGCTGGGGCCGCAGGATCCCTTCATGGT GATCTACACCTCGGGCACGACCGGCAAGCCAAAGGGTGTCGTCCATACACATGGCAGTTTCCCGCTCAAGATCGCCCATG ATGCGGTAGTGCACTTCGATGTGGCGCCGGGCGACGTCTTCTGCTGGCCCGCCGACATGGGCTGGATCGCCGGCACGCTG GTGCTGGGCTGCGCGCTGCTGCGCGGCGCGACGCTGGTCTGCTACGACGGCGCGCCCGATTACCCGAGCTGGGCACGTAT GTCGCAACTGGTGGAGCGGCACAAGGTCACCCATTTCGGCTCGGCGCCGACGCTGATCCGGGGCCTCGCCAGCAACGAGC AAGTGGCGCTACAAGGCGACGTGTCCTCCGTTCGCCTGTTGATCACCGCCGGCGAGGGCATCGATCCCGAGCATTTCTGC TGGTTCCAGCGGACCTTCGGGCGCGGCACGCAGCCGCTGATCAACTACACGGGCGGCACCGAGGTGTCGGGCGCGCTGCT GTCGAGCGTCGTCGTACGGCCCATCCCGCCGAGCGGTTTCAACACGACCTCGCCGGGGGTGGATGTGGACGTGGTCGACG CGGGTGGCACGCCATTGACCGGTACGGTGGGTGAACTGGTGATTCGCCAGCCTTTCGTGGGCATGACGCAGTCGTTCTGG CAGGACGCGGAGCGCTATCTCGATACCTACTGGCACACCATTCCCGGCCTCTGGGTGCATGGCGATCTGGCGTTGCGCCG GCCGGACGGCACGTTCTTCATGATGGGGCGTTCCGACGACACGCTGAAGGTGGCCGGCAAGCGGCTGGGGCCTGCGGAGG TGGAGGAAGTCGTGCTTGAACTGCCGGAAGTCGCGGAAGCCGCAGCAATTGGCGTGGACGACAAGGACAAGGGGCAGCGG CTGGTGGTGTTCGTCATCGGCGAAACTGGCGGTGCTGCTGACGCCGATGCTGTCGCGTCCCGCGTGATCAGCCATGTCGA CAAGCGCCTCGGACGGCCATTCCGGCCGAGCGCGGTGCACGTCGTGAATCAGTTGCCGAAGACGCGCAGTTCCAAAATCA TGCGCCGCGTGATTCGCAGCGTGTATTGCAACACGCCGCCGGGCGACCTCTCGTCGCTCGACAACCCCGCGTCGCTCGAC GAGATCCGCGCGGCATCGGGCACCGGCCCGCAGGCATGA
Upstream 100 bases:
>100_bases CGCAATTCCCGTCGGCGAAGCTGCCTGGCTGAGTGACACGGCCTTAAGTCGACATTGCGGCGATCTTGAGCCATCGCCCC GAGAGATTTTGAAGCGAGAC
Downstream 100 bases:
>100_bases GGCGGGCAGAAAAATGAAAGTTCTCGAAGGCATCAGGGTCCTGGATTTCGGCAGGTTCATCGCCGGCCCGTTCTGCGCGG CGCTGCTCGCCGACTTCGGC
Product: AMP-dependent synthetase and ligase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MMDTEANTWKPGPRELQASGIAQLMRAFDLTRYDDLLELSRNHPDRYWQVAMQHCGIVWDTPPTSYLDPASPREFPQWFP GGRLNWVNTVLAWTDDPRTRDQAAVVAEREGGEVQSISYAELGTRVRQFASGLQALGIGRGERVGLLMENGIEATVSLLA LASIGAIVVPLFSGFGVDAIVARLSAAEATSVIASTGFSRRSKRIDVEGTLREAWARLPALKRVVWKQAGAAQAAGPQDL DWQAVMASGAGRLADPVTLGPQDPFMVIYTSGTTGKPKGVVHTHGSFPLKIAHDAVVHFDVAPGDVFCWPADMGWIAGTL VLGCALLRGATLVCYDGAPDYPSWARMSQLVERHKVTHFGSAPTLIRGLASNEQVALQGDVSSVRLLITAGEGIDPEHFC WFQRTFGRGTQPLINYTGGTEVSGALLSSVVVRPIPPSGFNTTSPGVDVDVVDAGGTPLTGTVGELVIRQPFVGMTQSFW QDAERYLDTYWHTIPGLWVHGDLALRRPDGTFFMMGRSDDTLKVAGKRLGPAEVEEVVLELPEVAEAAAIGVDDKDKGQR LVVFVIGETGGAADADAVASRVISHVDKRLGRPFRPSAVHVVNQLPKTRSSKIMRRVIRSVYCNTPPGDLSSLDNPASLD EIRAASGTGPQA
Sequences:
>Translated_652_residues MMDTEANTWKPGPRELQASGIAQLMRAFDLTRYDDLLELSRNHPDRYWQVAMQHCGIVWDTPPTSYLDPASPREFPQWFP GGRLNWVNTVLAWTDDPRTRDQAAVVAEREGGEVQSISYAELGTRVRQFASGLQALGIGRGERVGLLMENGIEATVSLLA LASIGAIVVPLFSGFGVDAIVARLSAAEATSVIASTGFSRRSKRIDVEGTLREAWARLPALKRVVWKQAGAAQAAGPQDL DWQAVMASGAGRLADPVTLGPQDPFMVIYTSGTTGKPKGVVHTHGSFPLKIAHDAVVHFDVAPGDVFCWPADMGWIAGTL VLGCALLRGATLVCYDGAPDYPSWARMSQLVERHKVTHFGSAPTLIRGLASNEQVALQGDVSSVRLLITAGEGIDPEHFC WFQRTFGRGTQPLINYTGGTEVSGALLSSVVVRPIPPSGFNTTSPGVDVDVVDAGGTPLTGTVGELVIRQPFVGMTQSFW QDAERYLDTYWHTIPGLWVHGDLALRRPDGTFFMMGRSDDTLKVAGKRLGPAEVEEVVLELPEVAEAAAIGVDDKDKGQR LVVFVIGETGGAADADAVASRVISHVDKRLGRPFRPSAVHVVNQLPKTRSSKIMRRVIRSVYCNTPPGDLSSLDNPASLD EIRAASGTGPQA >Mature_652_residues MMDTEANTWKPGPRELQASGIAQLMRAFDLTRYDDLLELSRNHPDRYWQVAMQHCGIVWDTPPTSYLDPASPREFPQWFP GGRLNWVNTVLAWTDDPRTRDQAAVVAEREGGEVQSISYAELGTRVRQFASGLQALGIGRGERVGLLMENGIEATVSLLA LASIGAIVVPLFSGFGVDAIVARLSAAEATSVIASTGFSRRSKRIDVEGTLREAWARLPALKRVVWKQAGAAQAAGPQDL DWQAVMASGAGRLADPVTLGPQDPFMVIYTSGTTGKPKGVVHTHGSFPLKIAHDAVVHFDVAPGDVFCWPADMGWIAGTL VLGCALLRGATLVCYDGAPDYPSWARMSQLVERHKVTHFGSAPTLIRGLASNEQVALQGDVSSVRLLITAGEGIDPEHFC WFQRTFGRGTQPLINYTGGTEVSGALLSSVVVRPIPPSGFNTTSPGVDVDVVDAGGTPLTGTVGELVIRQPFVGMTQSFW QDAERYLDTYWHTIPGLWVHGDLALRRPDGTFFMMGRSDDTLKVAGKRLGPAEVEEVVLELPEVAEAAAIGVDDKDKGQR LVVFVIGETGGAADADAVASRVISHVDKRLGRPFRPSAVHVVNQLPKTRSSKIMRRVIRSVYCNTPPGDLSSLDNPASLD EIRAASGTGPQA
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=677, Percent_Identity=31.0192023633678, Blast_Score=278, Evalue=2e-74, Organism=Homo sapiens, GI253970489, Length=691, Percent_Identity=30.6801736613603, Blast_Score=275, Evalue=1e-73, Organism=Homo sapiens, GI28416953, Length=604, Percent_Identity=31.953642384106, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI13375727, Length=632, Percent_Identity=25.9493670886076, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI31982927, Length=634, Percent_Identity=25.0788643533123, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI42544132, Length=573, Percent_Identity=26.3525305410122, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI38505220, Length=529, Percent_Identity=26.2759924385633, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI122937307, Length=525, Percent_Identity=26.0952380952381, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI115511026, Length=528, Percent_Identity=25.5681818181818, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI58082049, Length=517, Percent_Identity=25.9187620889749, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI157311624, Length=516, Percent_Identity=25.7751937984496, Blast_Score=119, Evalue=9e-27, Organism=Homo sapiens, GI157311622, Length=516, Percent_Identity=25.7751937984496, Blast_Score=119, Evalue=9e-27, Organism=Homo sapiens, GI45580730, Length=366, Percent_Identity=28.1420765027322, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI187761345, Length=541, Percent_Identity=23.2902033271719, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI187761343, Length=541, Percent_Identity=23.2902033271719, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI1790505, Length=629, Percent_Identity=32.2734499205087, Blast_Score=290, Evalue=2e-79, Organism=Escherichia coli, GI1786529, Length=631, Percent_Identity=32.6465927099841, Blast_Score=269, Evalue=4e-73, Organism=Escherichia coli, GI1788107, Length=540, Percent_Identity=24.6296296296296, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI145693145, Length=547, Percent_Identity=26.1425959780622, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1786810, Length=561, Percent_Identity=25.3119429590018, Blast_Score=84, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71983001, Length=621, Percent_Identity=27.3752012882448, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71982997, Length=621, Percent_Identity=27.3752012882448, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17569507, Length=635, Percent_Identity=23.3070866141732, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17531443, Length=545, Percent_Identity=23.302752293578, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI71994703, Length=488, Percent_Identity=22.9508196721311, Blast_Score=93, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71994694, Length=488, Percent_Identity=22.9508196721311, Blast_Score=92, Evalue=8e-19, Organism=Caenorhabditis elegans, GI71994690, Length=488, Percent_Identity=22.9508196721311, Blast_Score=92, Evalue=8e-19, Organism=Caenorhabditis elegans, GI32563687, Length=513, Percent_Identity=22.0272904483431, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560308, Length=497, Percent_Identity=24.9496981891348, Blast_Score=86, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17560140, Length=363, Percent_Identity=23.4159779614325, Blast_Score=78, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323182, Length=641, Percent_Identity=30.8892355694228, Blast_Score=275, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6319264, Length=580, Percent_Identity=31.3793103448276, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6319699, Length=575, Percent_Identity=21.9130434782609, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24667955, Length=676, Percent_Identity=30.1775147928994, Blast_Score=269, Evalue=4e-72, Organism=Drosophila melanogaster, GI62472339, Length=552, Percent_Identity=32.0652173913043, Blast_Score=262, Evalue=7e-70, Organism=Drosophila melanogaster, GI24667959, Length=515, Percent_Identity=32.0388349514563, Blast_Score=242, Evalue=6e-64, Organism=Drosophila melanogaster, GI21355225, Length=627, Percent_Identity=27.2727272727273, Blast_Score=212, Evalue=6e-55, Organism=Drosophila melanogaster, GI19922652, Length=530, Percent_Identity=25.4716981132075, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI21355181, Length=504, Percent_Identity=23.6111111111111, Blast_Score=90, Evalue=6e-18, Organism=Drosophila melanogaster, GI24648260, Length=375, Percent_Identity=26.9333333333333, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI21356441, Length=534, Percent_Identity=22.4719101123595, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI20130357, Length=381, Percent_Identity=25.7217847769029, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24648676, Length=421, Percent_Identity=24.9406175771971, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356947, Length=386, Percent_Identity=25.9067357512953, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI24648257, Length=363, Percent_Identity=25.6198347107438, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI18859661, Length=531, Percent_Identity=22.2222222222222, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 70199; Mature: 70199
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDTEANTWKPGPRELQASGIAQLMRAFDLTRYDDLLELSRNHPDRYWQVAMQHCGIVWD CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEEC TPPTSYLDPASPREFPQWFPGGRLNWVNTVLAWTDDPRTRDQAAVVAEREGGEVQSISYA CCCCCCCCCCCCCCCCCCCCCCCEEHEEEEEEECCCCCCCCCCEEEEECCCCCEEEEHHH ELGTRVRQFASGLQALGIGRGERVGLLMENGIEATVSLLALASIGAIVVPLFSGFGVDAI HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VARLSAAEATSVIASTGFSRRSKRIDVEGTLREAWARLPALKRVVWKQAGAAQAAGPQDL HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DWQAVMASGAGRLADPVTLGPQDPFMVIYTSGTTGKPKGVVHTHGSFPLKIAHDAVVHFD CHHHHHHCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCEEEECCCCCEEEECCEEEEEE VAPGDVFCWPADMGWIAGTLVLGCALLRGATLVCYDGAPDYPSWARMSQLVERHKVTHFG CCCCCEEEECCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC SAPTLIRGLASNEQVALQGDVSSVRLLITAGEGIDPEHFCWFQRTFGRGTQPLINYTGGT CCHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCC EVSGALLSSVVVRPIPPSGFNTTSPGVDVDVVDAGGTPLTGTVGELVIRQPFVGMTQSFW CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHH QDAERYLDTYWHTIPGLWVHGDLALRRPDGTFFMMGRSDDTLKVAGKRLGPAEVEEVVLE HHHHHHHHHHHHHCCCEEEECCEEEECCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHH LPEVAEAAAIGVDDKDKGQRLVVFVIGETGGAADADAVASRVISHVDKRLGRPFRPSAVH CHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH VVNQLPKTRSSKIMRRVIRSVYCNTPPGDLSSLDNPASLDEIRAASGTGPQA HHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MMDTEANTWKPGPRELQASGIAQLMRAFDLTRYDDLLELSRNHPDRYWQVAMQHCGIVWD CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEEC TPPTSYLDPASPREFPQWFPGGRLNWVNTVLAWTDDPRTRDQAAVVAEREGGEVQSISYA CCCCCCCCCCCCCCCCCCCCCCCEEHEEEEEEECCCCCCCCCCEEEEECCCCCEEEEHHH ELGTRVRQFASGLQALGIGRGERVGLLMENGIEATVSLLALASIGAIVVPLFSGFGVDAI HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VARLSAAEATSVIASTGFSRRSKRIDVEGTLREAWARLPALKRVVWKQAGAAQAAGPQDL HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DWQAVMASGAGRLADPVTLGPQDPFMVIYTSGTTGKPKGVVHTHGSFPLKIAHDAVVHFD CHHHHHHCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCEEEECCCCCEEEECCEEEEEE VAPGDVFCWPADMGWIAGTLVLGCALLRGATLVCYDGAPDYPSWARMSQLVERHKVTHFG CCCCCEEEECCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC SAPTLIRGLASNEQVALQGDVSSVRLLITAGEGIDPEHFCWFQRTFGRGTQPLINYTGGT CCHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCC EVSGALLSSVVVRPIPPSGFNTTSPGVDVDVVDAGGTPLTGTVGELVIRQPFVGMTQSFW CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHH QDAERYLDTYWHTIPGLWVHGDLALRRPDGTFFMMGRSDDTLKVAGKRLGPAEVEEVVLE HHHHHHHHHHHHHCCCEEEECCEEEECCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHH LPEVAEAAAIGVDDKDKGQRLVVFVIGETGGAADADAVASRVISHVDKRLGRPFRPSAVH CHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH VVNQLPKTRSSKIMRRVIRSVYCNTPPGDLSSLDNPASLDEIRAASGTGPQA HHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]