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The map label for this gene is kipR [H]

Identifier: 73541285

GI number: 73541285

Start: 1716802

End: 1717596

Strand: Reverse

Name: kipR [H]

Synonym: Reut_A1595

Alternate gene names: 73541285

Gene position: 1717596-1716802 (Counterclockwise)

Preceding gene: 73541290

Following gene: 73541284

Centisome position: 45.12

GC content: 67.8

Gene sequence:

>795_bases
ATGTTGAATGCTGTCGATAAGCCCGGCGCCATGAATCCCGCGCCTTCCACGTCCGCCGAATCCGCCCAGCCCGCGGGCGG
CGCCGATCGTGTGCTGTTCGTGCTGGCGACGCTCGCCCAGCACGGCGCGCCGATCACCGTGCGCGAACTCGTTGCCACGA
CCGGACTCCCCAAAAGCACGCTCTACCGGCAATTGATGATGCTCAAGCGCTGGGGTTTTGTGCTGGAGTCCGACGGCGAA
TACGCACCGGGCCCAATCAGCCTGCAACTGGCGCTCGGCTTTGACATGGCCTCCCACCTGGCCCGCGAAGCCTTGCCGGA
CATGCGGCTGCTCGCGCAGCAATCCGATGAAAGCGTGGGCCTGGTCGTTGCCGTGAAGGATCACGTCGTCTGCCTTGAAA
TGGTCGAGAGCCGCCAGTCGCTGCGTTGCTCGTTCGAGAAAGGCCGCGGCGTGCCGTTGCGCACCGGTGCGTCGGCCATG
TCGCTGCTCGCCTTCATGCGGGACGAAGCGCGCGAGCGCGTCGTACGTGCCCAGTGCGAGCCGGCCGAAGCCGAACGTCT
GCTGGCCGAACTCGCCGCCATTCGCGAGACCGGCTACGCCGTCAGCGAGGGCGCCGTGGATCCGGGCGTGTGGGGCGTGA
GCGCCCCGCTCTTCTCGCGGCGCGGCAAGACGGATGCGCTGGGCTCCATCACGCTGATGGTGCCGGCCACCCGACGGCAA
GGGCGTGAGACCGCGCTGATCGACATGACCGTGGCCGCGGCGATGCGGATTTCCGCGCGCCTGCAGTCCTACTGA

Upstream 100 bases:

>100_bases
ACGAAACTGCACGATATAAGGGTTATCCCTAGCTCATTATTCCCATTTCCCGAGACTTGGAGTTTTGATTTTTGGGAACG
AAGTCCTATTCTTTGCCCCT

Downstream 100 bases:

>100_bases
ATTACGAAGCCCCTCATTACCGCTGCCGTCGGCAAGCCCATGTGGCGGCAGATTCCTCGTTCCCGAGAAAAGGAGACCTC
CATGAACCTTCGCCGCAAAT

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Kip operon repressor protein [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLNAVDKPGAMNPAPSTSAESAQPAGGADRVLFVLATLAQHGAPITVRELVATTGLPKSTLYRQLMMLKRWGFVLESDGE
YAPGPISLQLALGFDMASHLAREALPDMRLLAQQSDESVGLVVAVKDHVVCLEMVESRQSLRCSFEKGRGVPLRTGASAM
SLLAFMRDEARERVVRAQCEPAEAERLLAELAAIRETGYAVSEGAVDPGVWGVSAPLFSRRGKTDALGSITLMVPATRRQ
GRETALIDMTVAAAMRISARLQSY

Sequences:

>Translated_264_residues
MLNAVDKPGAMNPAPSTSAESAQPAGGADRVLFVLATLAQHGAPITVRELVATTGLPKSTLYRQLMMLKRWGFVLESDGE
YAPGPISLQLALGFDMASHLAREALPDMRLLAQQSDESVGLVVAVKDHVVCLEMVESRQSLRCSFEKGRGVPLRTGASAM
SLLAFMRDEARERVVRAQCEPAEAERLLAELAAIRETGYAVSEGAVDPGVWGVSAPLFSRRGKTDALGSITLMVPATRRQ
GRETALIDMTVAAAMRISARLQSY
>Mature_264_residues
MLNAVDKPGAMNPAPSTSAESAQPAGGADRVLFVLATLAQHGAPITVRELVATTGLPKSTLYRQLMMLKRWGFVLESDGE
YAPGPISLQLALGFDMASHLAREALPDMRLLAQQSDESVGLVVAVKDHVVCLEMVESRQSLRCSFEKGRGVPLRTGASAM
SLLAFMRDEARERVVRAQCEPAEAERLLAELAAIRETGYAVSEGAVDPGVWGVSAPLFSRRGKTDALGSITLMVPATRRQ
GRETALIDMTVAAAMRISARLQSY

Specific function: Transcriptional repressor of the kip gene-containing operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=246, Percent_Identity=26.8292682926829, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 28308; Mature: 28308

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNAVDKPGAMNPAPSTSAESAQPAGGADRVLFVLATLAQHGAPITVRELVATTGLPKST
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
LYRQLMMLKRWGFVLESDGEYAPGPISLQLALGFDMASHLAREALPDMRLLAQQSDESVG
HHHHHHHHHHCCCEEECCCCCCCCCEEEEEEECHHHHHHHHHHHCCHHHHHHHCCCCCCE
LVVAVKDHVVCLEMVESRQSLRCSFEKGRGVPLRTGASAMSLLAFMRDEARERVVRAQCE
EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PAEAERLLAELAAIRETGYAVSEGAVDPGVWGVSAPLFSRRGKTDALGSITLMVPATRRQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECHHCC
GRETALIDMTVAAAMRISARLQSY
CCCEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNAVDKPGAMNPAPSTSAESAQPAGGADRVLFVLATLAQHGAPITVRELVATTGLPKST
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
LYRQLMMLKRWGFVLESDGEYAPGPISLQLALGFDMASHLAREALPDMRLLAQQSDESVG
HHHHHHHHHHCCCEEECCCCCCCCCEEEEEEECHHHHHHHHHHHCCHHHHHHHCCCCCCE
LVVAVKDHVVCLEMVESRQSLRCSFEKGRGVPLRTGASAMSLLAFMRDEARERVVRAQCE
EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PAEAERLLAELAAIRETGYAVSEGAVDPGVWGVSAPLFSRRGKTDALGSITLMVPATRRQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECHHCC
GRETALIDMTVAAAMRISARLQSY
CCCEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]