| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73541256
Identifier: 73541256
GI number: 73541256
Start: 1687022
End: 1687810
Strand: Direct
Name: 73541256
Synonym: Reut_A1566
Alternate gene names: NA
Gene position: 1687022-1687810 (Clockwise)
Preceding gene: 73541255
Following gene: 73541257
Centisome position: 44.32
GC content: 61.85
Gene sequence:
>789_bases GTGGGCACTGATCGAACCTTTGCTGCCGCCGCCGAAACCGCGACGCAAGAAATATCCAGGGCGGCTCCCGGTTTCGAACC GGGCTGCACTGAACGGCATCCTGTTCGTGTTCAAGACTGGCATACGCTGGTGCGACCTGTCGACCAAGTTGGGATTCGGG TCGGGGCCGACCTGCTGGAGGCGCTTGCGCGATTGGCAGAAGGCCGGCGTTTGGAAGCGATTGCACGAGCTACTGCTGGC GAAGTTACGCGAGGCCGGCGAACTCGACTTCTCCCGAGCAGCCGTCGATTCATCGTCTGTGCGAGCCGTTGGGGCGGGCG AAAAACTGGTCCGAACCCCACGGATCGCTCGCGACCAGGTTCCAAGCATCACATCCTCGTCGACGCAAATGGCGTCCCCA TCAGCGCAATCCTGACCGGGGCGAACCGCAACGACGTCACCCAACTGCTGCCGCTCGTCGACGCGATCCCGCCAATTCGC GGCGTGCGCGGTCGCCCGCTTCAAAAGCCCAAAGTCATCTACGCAGACCGTGGCTACGACTCCGAGCCGCATCGTCAGCG GCTTCGCGAGCGCGGCATCAAACCGGTGCTCGCCAAGCGCCGGACAGAACACGGCAGTGGCTTGGGCAAATTCCGCTGGG TTGTCGAACGTACTCACGCGTGGCTTCACAACTTTCGTCGTCTTCGCATTCGCTTCGAACGTCGAGCCGACATTCACGAA GCGTTCCTAAAACTCGGCTGCTCTCTCGTCTGCTGGAACATCTTCAGGCGCGCTGAGCCGTCTTTTTGA
Upstream 100 bases:
>100_bases AGCCCCGGGGGGCTGTTAACCTTTTCGGCAAGCTGTTAACCTTGGCCATCTGAACAACTGGAACCGAGGGGATGAGCGCG CCGATCATTGATGATGAACT
Downstream 100 bases:
>100_bases AACAGTCTCTAAGGAGAAGGCCATGGGAATCTGCGACGGACGCACCGTTATCGTCACTGGCGCCGGCGGCGGGCTCGGCC GCGCCTATGCGCTGGCCTTT
Product: IS4 family transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MGTDRTFAAAAETATQEISRAAPGFEPGCTERHPVRVQDWHTLVRPVDQVGIRVGADLLEALARLAEGRRLEAIARATAG EVTRGRRTRLLPSSRRFIVCASRWGGRKTGPNPTDRSRPGSKHHILVDANGVPISAILTGANRNDVTQLLPLVDAIPPIR GVRGRPLQKPKVIYADRGYDSEPHRQRLRERGIKPVLAKRRTEHGSGLGKFRWVVERTHAWLHNFRRLRIRFERRADIHE AFLKLGCSLVCWNIFRRAEPSF
Sequences:
>Translated_262_residues MGTDRTFAAAAETATQEISRAAPGFEPGCTERHPVRVQDWHTLVRPVDQVGIRVGADLLEALARLAEGRRLEAIARATAG EVTRGRRTRLLPSSRRFIVCASRWGGRKTGPNPTDRSRPGSKHHILVDANGVPISAILTGANRNDVTQLLPLVDAIPPIR GVRGRPLQKPKVIYADRGYDSEPHRQRLRERGIKPVLAKRRTEHGSGLGKFRWVVERTHAWLHNFRRLRIRFERRADIHE AFLKLGCSLVCWNIFRRAEPSF >Mature_261_residues GTDRTFAAAAETATQEISRAAPGFEPGCTERHPVRVQDWHTLVRPVDQVGIRVGADLLEALARLAEGRRLEAIARATAGE VTRGRRTRLLPSSRRFIVCASRWGGRKTGPNPTDRSRPGSKHHILVDANGVPISAILTGANRNDVTQLLPLVDAIPPIRG VRGRPLQKPKVIYADRGYDSEPHRQRLRERGIKPVLAKRRTEHGSGLGKFRWVVERTHAWLHNFRRLRIRFERRADIHEA FLKLGCSLVCWNIFRRAEPSF
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 29550; Mature: 29419
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTDRTFAAAAETATQEISRAAPGFEPGCTERHPVRVQDWHTLVRPVDQVGIRVGADLLE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALARLAEGRRLEAIARATAGEVTRGRRTRLLPSSRRFIVCASRWGGRKTGPNPTDRSRPG HHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC SKHHILVDANGVPISAILTGANRNDVTQLLPLVDAIPPIRGVRGRPLQKPKVIYADRGYD CCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC SEPHRQRLRERGIKPVLAKRRTEHGSGLGKFRWVVERTHAWLHNFRRLRIRFERRADIHE CCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFLKLGCSLVCWNIFRRAEPSF HHHHHCHHHHHHHHHHHCCCCC >Mature Secondary Structure GTDRTFAAAAETATQEISRAAPGFEPGCTERHPVRVQDWHTLVRPVDQVGIRVGADLLE CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALARLAEGRRLEAIARATAGEVTRGRRTRLLPSSRRFIVCASRWGGRKTGPNPTDRSRPG HHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC SKHHILVDANGVPISAILTGANRNDVTQLLPLVDAIPPIRGVRGRPLQKPKVIYADRGYD CCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC SEPHRQRLRERGIKPVLAKRRTEHGSGLGKFRWVVERTHAWLHNFRRLRIRFERRADIHE CCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFLKLGCSLVCWNIFRRAEPSF HHHHHCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650732 [H]